data_8VO
# 
_chem_comp.id                                    8VO 
_chem_comp.name                                  
"(4R)-3-[(2S,3S)-3-[[(2R)-2-[2-(4-aminophenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-N-[(1S,2R)-2-oxidanyl-2,3-dihydro-1H-inden-1-yl]-1,3-thiazolidine-4-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C37 H45 N5 O6 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-10-04 
_chem_comp.pdbx_modified_date                    2018-07-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        719.913 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8VO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5YIC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8VO C36 C1  C 0 1 Y N N -24.544 16.800 -7.755  1.353  2.260  -0.083 C36 8VO 1  
8VO C35 C2  C 0 1 N N R -25.157 21.121 -8.517  3.627  -0.610 -0.679 C35 8VO 2  
8VO C38 C3  C 0 1 N N N -25.545 22.535 -8.935  3.893  -1.998 -1.265 C38 8VO 3  
8VO C34 C4  C 0 1 N N N -25.268 20.130 -9.673  2.176  -0.502 -0.285 C34 8VO 4  
8VO C33 C5  C 0 1 Y N N -24.885 16.261 -9.125  0.138  1.673  0.219  C33 8VO 5  
8VO C32 C6  C 0 1 Y N N -21.806 11.787 -13.010 -7.244 3.295  -2.750 C32 8VO 6  
8VO C31 C7  C 0 1 Y N N -22.311 13.109 -12.462 -6.063 2.577  -2.728 C31 8VO 7  
8VO C23 C8  C 0 1 N N N -23.116 12.259 -16.815 -8.473 2.365  0.785  C23 8VO 8  
8VO C24 C9  C 0 1 Y N N -22.768 12.361 -15.390 -7.738 2.550  -0.525 C24 8VO 9  
8VO C25 C10 C 0 1 N N N -27.398 17.277 -12.454 -2.491 -1.327 -1.364 C25 8VO 10 
8VO C21 C11 C 0 1 N N N -26.642 17.606 -17.333 -4.284 -1.812 2.811  C21 8VO 11 
8VO C14 C12 C 0 1 N N R -26.513 16.895 -14.809 -4.199 -1.967 0.282  C14 8VO 12 
8VO C15 C13 C 0 1 N N N -27.036 17.988 -15.900 -4.352 -2.751 1.605  C15 8VO 13 
8VO C16 C14 C 0 1 N N S -23.925 14.364 -15.949 -6.427 1.099  0.816  C16 8VO 14 
8VO S01 S1  S 0 1 N N N -26.286 19.443 -15.386 -2.880 -3.856 1.543  S01 8VO 15 
8VO S02 S2  S 0 1 N N N -27.325 22.635 -9.271  5.639  -2.129 -1.739 S02 8VO 16 
8VO O03 O1  O 0 1 N N N -25.481 12.677 -16.755 -8.566 -0.066 1.058  O03 8VO 17 
8VO O04 O2  O 0 1 N N N -24.167 16.985 -14.959 -3.849 0.344  0.601  O04 8VO 18 
8VO O05 O3  O 0 1 N N N -28.604 17.870 -10.462 -0.968 -0.726 -3.116 O05 8VO 19 
8VO O06 O4  O 0 1 N N N -27.895 16.195 -12.444 -3.339 -0.770 -2.028 O06 8VO 20 
8VO O07 O5  O 0 1 N N N -24.750 20.319 -10.733 1.876  -0.278 0.868  O07 8VO 21 
8VO O08 O6  O 0 1 N N N -24.016 20.190 -6.044  6.174  0.269  -0.746 O08 8VO 22 
8VO N09 N1  N 0 1 N N N -26.650 17.682 -13.598 -2.831 -1.941 -0.213 N09 8VO 23 
8VO N10 N2  N 0 1 N N N -25.129 15.025 -15.552 -5.978 -0.278 0.598  N10 8VO 24 
8VO N11 N3  N 0 1 N N N -26.036 18.931 -9.427  1.212  -0.653 -1.215 N11 8VO 25 
8VO N12 N4  N 0 1 N N N -23.774 21.238 -8.068  4.470  -0.409 0.502  N12 8VO 26 
8VO N13 N5  N 0 1 N N N -19.123 15.982 -4.538  11.703 2.117  -0.043 N13 8VO 27 
8VO C17 C15 C 0 1 N N N -25.918 19.138 -13.962 -1.844 -2.635 0.637  C17 8VO 28 
8VO C18 C16 C 0 1 N N N -25.177 16.368 -15.070 -4.661 -0.551 0.505  C18 8VO 29 
8VO C19 C17 C 0 1 N N R -24.289 13.264 -16.995 -7.844 1.110  1.428  C19 8VO 30 
8VO C20 C18 C 0 1 N N N -28.574 18.088 -15.721 -5.649 -3.562 1.617  C20 8VO 31 
8VO C22 C19 C 0 1 Y N N -23.267 13.653 -14.853 -6.562 1.823  -0.507 C22 8VO 32 
8VO C26 C20 C 0 1 N N S -27.482 18.177 -11.243 -1.056 -1.334 -1.825 C26 8VO 33 
8VO C27 C21 C 0 1 N N S -26.198 17.899 -10.433 -0.198 -0.547 -0.832 C27 8VO 34 
8VO C28 C22 C 0 1 Y N N -23.051 14.045 -13.389 -5.723 1.843  -1.609 C28 8VO 35 
8VO C29 C23 C 0 1 Y N N -22.027 11.405 -14.456 -8.079 3.281  -1.650 C29 8VO 36 
8VO C30 C24 C 0 1 N N N -26.250 16.536 -9.714  -0.621 0.923  -0.845 C30 8VO 37 
8VO C37 C25 C 0 1 Y N N -23.876 15.462 -9.915  -0.380 1.775  1.496  C37 8VO 38 
8VO C39 C26 C 0 1 Y N N -23.173 16.545 -7.162  2.049  2.948  0.893  C39 8VO 39 
8VO C40 C27 C 0 1 Y N N -22.508 15.201 -9.313  0.317  2.463  2.472  C40 8VO 40 
8VO C41 C28 C 0 1 Y N N -22.166 15.749 -7.943  1.529  3.055  2.169  C41 8VO 41 
8VO C42 C29 C 0 1 N N N -23.296 20.753 -6.792  5.734  0.036  0.360  C42 8VO 42 
8VO C43 C30 C 0 1 N N N -21.820 20.982 -6.426  6.601  0.243  1.575  C43 8VO 43 
8VO C44 C31 C 0 1 N N N -28.154 22.730 -7.670  5.757  -3.814 -2.401 C44 8VO 44 
8VO C45 C32 C 0 1 Y N N -21.134 19.708 -5.956  7.957  0.741  1.145  C45 8VO 45 
8VO C46 C33 C 0 1 Y N N -20.040 19.079 -6.810  8.965  -0.162 0.858  C46 8VO 46 
8VO C47 C34 C 0 1 Y N N -21.536 19.088 -4.628  8.189  2.100  1.032  C47 8VO 47 
8VO C48 C35 C 0 1 Y N N -19.350 17.804 -6.341  10.208 0.291  0.464  C48 8VO 48 
8VO C49 C36 C 0 1 Y N N -20.847 17.826 -4.153  9.431  2.559  0.638  C49 8VO 49 
8VO C50 C37 C 0 1 Y N N -19.762 17.184 -5.010  10.447 1.655  0.355  C50 8VO 50 
8VO H1  H1  H 0 1 N N N -25.277 17.366 -7.199  1.760  2.177  -1.080 H1  8VO 51 
8VO H2  H2  H 0 1 N N N -25.803 20.793 -7.689  3.859  0.150  -1.425 H2  8VO 52 
8VO H3  H3  H 0 1 N N N -24.989 22.809 -9.844  3.661  -2.758 -0.519 H3  8VO 53 
8VO H4  H4  H 0 1 N N N -25.290 23.234 -8.125  3.266  -2.148 -2.144 H4  8VO 54 
8VO H5  H5  H 0 1 N N N -21.280 11.108 -12.356 -7.511 3.870  -3.624 H5  8VO 55 
8VO H6  H6  H 0 1 N N N -22.145 13.376 -11.429 -5.406 2.590  -3.586 H6  8VO 56 
8VO H7  H7  H 0 1 N N N -23.436 11.237 -17.066 -8.326 3.233  1.428  H7  8VO 57 
8VO H8  H8  H 0 1 N N N -22.261 12.541 -17.446 -9.536 2.206  0.603  H8  8VO 58 
8VO H9  H9  H 0 1 N N N -25.546 17.548 -17.409 -4.335 -2.396 3.730  H9  8VO 59 
8VO H10 H10 H 0 1 N N N -27.079 16.629 -17.585 -3.346 -1.256 2.786  H10 8VO 60 
8VO H11 H11 H 0 1 N N N -27.018 18.367 -18.032 -5.121 -1.115 2.777  H11 8VO 61 
8VO H12 H12 H 0 1 N N N -27.239 16.068 -14.797 -4.836 -2.428 -0.473 H12 8VO 62 
8VO H13 H13 H 0 1 N N N -23.226 15.076 -16.412 -5.729 1.626  1.465  H13 8VO 63 
8VO H14 H14 H 0 1 N N N -26.177 13.313 -16.872 -9.489 -0.068 1.347  H14 8VO 64 
8VO H15 H15 H 0 1 N N N -28.986 17.054 -10.763 -1.272 0.191  -3.140 H15 8VO 65 
8VO H16 H16 H 0 1 N N N -25.988 14.517 -15.616 -6.628 -0.994 0.521  H16 8VO 66 
8VO H17 H17 H 0 1 N N N -26.470 18.809 -8.534  1.452  -0.832 -2.138 H17 8VO 67 
8VO H18 H18 H 0 1 N N N -23.117 21.680 -8.679  4.118  -0.596 1.387  H18 8VO 68 
8VO H19 H19 H 0 1 N N N -19.515 15.720 -3.656  12.411 1.484  -0.243 H19 8VO 69 
8VO H20 H20 H 0 1 N N N -19.268 15.246 -5.199  11.869 3.069  -0.118 H20 8VO 70 
8VO H21 H21 H 0 1 N N N -24.826 19.053 -13.859 -1.372 -1.937 1.329  H21 8VO 71 
8VO H22 H22 H 0 1 N N N -26.288 19.929 -13.294 -1.095 -3.140 0.026  H22 8VO 72 
8VO H23 H23 H 0 1 N N N -24.238 13.699 -18.004 -7.800 1.211  2.512  H23 8VO 73 
8VO H24 H24 H 0 1 N N N -28.806 18.363 -14.681 -6.502 -2.885 1.569  H24 8VO 74 
8VO H25 H25 H 0 1 N N N -28.973 18.855 -16.401 -5.668 -4.231 0.757  H25 8VO 75 
8VO H26 H26 H 0 1 N N N -29.034 17.116 -15.954 -5.702 -4.149 2.534  H26 8VO 76 
8VO H27 H27 H 0 1 N N N -27.491 19.230 -11.562 -0.697 -2.361 -1.882 H27 8VO 77 
8VO H28 H28 H 0 1 N N N -25.339 17.904 -11.120 -0.334 -0.956 0.169  H28 8VO 78 
8VO H29 H29 H 0 1 N N N -23.426 14.988 -13.020 -4.800 1.282  -1.592 H29 8VO 79 
8VO H30 H30 H 0 1 N N N -21.662 10.459 -14.828 -8.997 3.850  -1.664 H30 8VO 80 
8VO H31 H31 H 0 1 N N N -27.002 16.566 -8.912  -1.690 0.995  -0.647 H31 8VO 81 
8VO H32 H32 H 0 1 N N N -26.512 15.745 -10.433 -0.402 1.356  -1.821 H32 8VO 82 
8VO H33 H33 H 0 1 N N N -24.125 15.082 -10.895 -1.329 1.317  1.732  H33 8VO 83 
8VO H34 H34 H 0 1 N N N -22.922 16.932 -6.186  3.001  3.403  0.658  H34 8VO 84 
8VO H35 H35 H 0 1 N N N -21.778 14.624 -9.861  -0.088 2.543  3.470  H35 8VO 85 
8VO H36 H36 H 0 1 N N N -21.188 15.566 -7.523  2.073  3.592  2.931  H36 8VO 86 
8VO H37 H37 H 0 1 N N N -21.291 21.361 -7.313  6.136  0.978  2.232  H37 8VO 87 
8VO H38 H38 H 0 1 N N N -21.768 21.729 -5.620  6.713  -0.701 2.107  H38 8VO 88 
8VO H39 H39 H 0 1 N N N -29.242 22.793 -7.823  5.479  -4.529 -1.626 H39 8VO 89 
8VO H40 H40 H 0 1 N N N -27.918 21.832 -7.081  5.083  -3.919 -3.251 H40 8VO 90 
8VO H41 H41 H 0 1 N N N -27.808 23.624 -7.130  6.781  -4.008 -2.722 H41 8VO 91 
8VO H42 H42 H 0 1 N N N -19.754 19.536 -7.746  8.778  -1.222 0.943  H42 8VO 92 
8VO H43 H43 H 0 1 N N N -22.308 19.545 -4.027  7.399  2.802  1.253  H43 8VO 93 
8VO H44 H44 H 0 1 N N N -18.579 17.346 -6.943  10.995 -0.415 0.241  H44 8VO 94 
8VO H45 H45 H 0 1 N N N -21.124 17.381 -3.208  9.611  3.621  0.551  H45 8VO 95 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8VO C21 C15 SING N N 1  
8VO C19 C23 SING N N 2  
8VO C19 O03 SING N N 3  
8VO C19 C16 SING N N 4  
8VO C23 C24 SING N N 5  
8VO C16 N10 SING N N 6  
8VO C16 C22 SING N N 7  
8VO C15 C20 SING N N 8  
8VO C15 S01 SING N N 9  
8VO C15 C14 SING N N 10 
8VO N10 C18 SING N N 11 
8VO C24 C22 SING Y N 12 
8VO C24 C29 DOUB Y N 13 
8VO S01 C17 SING N N 14 
8VO C18 O04 DOUB N N 15 
8VO C18 C14 SING N N 16 
8VO C22 C28 DOUB Y N 17 
8VO C14 N09 SING N N 18 
8VO C29 C32 SING Y N 19 
8VO C17 N09 SING N N 20 
8VO N09 C25 SING N N 21 
8VO C28 C31 SING Y N 22 
8VO C32 C31 DOUB Y N 23 
8VO C25 O06 DOUB N N 24 
8VO C25 C26 SING N N 25 
8VO C26 O05 SING N N 26 
8VO C26 C27 SING N N 27 
8VO O07 C34 DOUB N N 28 
8VO C27 C30 SING N N 29 
8VO C27 N11 SING N N 30 
8VO C37 C40 DOUB Y N 31 
8VO C37 C33 SING Y N 32 
8VO C30 C33 SING N N 33 
8VO C34 N11 SING N N 34 
8VO C34 C35 SING N N 35 
8VO C40 C41 SING Y N 36 
8VO S02 C38 SING N N 37 
8VO S02 C44 SING N N 38 
8VO C33 C36 DOUB Y N 39 
8VO C38 C35 SING N N 40 
8VO C35 N12 SING N N 41 
8VO N12 C42 SING N N 42 
8VO C41 C39 DOUB Y N 43 
8VO C36 C39 SING Y N 44 
8VO C46 C48 DOUB Y N 45 
8VO C46 C45 SING Y N 46 
8VO C42 C43 SING N N 47 
8VO C42 O08 DOUB N N 48 
8VO C43 C45 SING N N 49 
8VO C48 C50 SING Y N 50 
8VO C45 C47 DOUB Y N 51 
8VO C50 N13 SING N N 52 
8VO C50 C49 DOUB Y N 53 
8VO C47 C49 SING Y N 54 
8VO C36 H1  SING N N 55 
8VO C35 H2  SING N N 56 
8VO C38 H3  SING N N 57 
8VO C38 H4  SING N N 58 
8VO C32 H5  SING N N 59 
8VO C31 H6  SING N N 60 
8VO C23 H7  SING N N 61 
8VO C23 H8  SING N N 62 
8VO C21 H9  SING N N 63 
8VO C21 H10 SING N N 64 
8VO C21 H11 SING N N 65 
8VO C14 H12 SING N N 66 
8VO C16 H13 SING N N 67 
8VO O03 H14 SING N N 68 
8VO O05 H15 SING N N 69 
8VO N10 H16 SING N N 70 
8VO N11 H17 SING N N 71 
8VO N12 H18 SING N N 72 
8VO N13 H19 SING N N 73 
8VO N13 H20 SING N N 74 
8VO C17 H21 SING N N 75 
8VO C17 H22 SING N N 76 
8VO C19 H23 SING N N 77 
8VO C20 H24 SING N N 78 
8VO C20 H25 SING N N 79 
8VO C20 H26 SING N N 80 
8VO C26 H27 SING N N 81 
8VO C27 H28 SING N N 82 
8VO C28 H29 SING N N 83 
8VO C29 H30 SING N N 84 
8VO C30 H31 SING N N 85 
8VO C30 H32 SING N N 86 
8VO C37 H33 SING N N 87 
8VO C39 H34 SING N N 88 
8VO C40 H35 SING N N 89 
8VO C41 H36 SING N N 90 
8VO C43 H37 SING N N 91 
8VO C43 H38 SING N N 92 
8VO C44 H39 SING N N 93 
8VO C44 H40 SING N N 94 
8VO C44 H41 SING N N 95 
8VO C46 H42 SING N N 96 
8VO C47 H43 SING N N 97 
8VO C48 H44 SING N N 98 
8VO C49 H45 SING N N 99 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8VO InChI            InChI                1.03  
;InChI=1S/C37H45N5O6S2/c1-37(2)33(35(47)41-31-26-12-8-7-11-24(26)19-29(31)43)42(21-50-37)36(48)32(45)27(17-22-9-5-4-6-10-22)40-34(46)28(20-49-3)39-30(44)18-23-13-15-25(38)16-14-23/h4-16,27-29,31-33,43,45H,17-21,38H2,1-3H3,(H,39,44)(H,40,46)(H,41,47)/t27-,28-,29+,31-,32-,33+/m0/s1
;
8VO InChIKey         InChI                1.03  RYWMWBDZOSPVOM-ACUZRORGSA-N 
8VO SMILES_CANONICAL CACTVS               3.385 "CSC[C@H](NC(=O)Cc1ccc(N)cc1)C(=O)N[C@@H](Cc2ccccc2)[C@H](O)C(=O)N3CSC(C)(C)[C@H]3C(=O)N[C@@H]4[C@H](O)Cc5ccccc45" 
8VO SMILES           CACTVS               3.385 "CSC[CH](NC(=O)Cc1ccc(N)cc1)C(=O)N[CH](Cc2ccccc2)[CH](O)C(=O)N3CSC(C)(C)[CH]3C(=O)N[CH]4[CH](O)Cc5ccccc45" 
8VO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1([C@H](N(CS1)C(=O)[C@H]([C@H](Cc2ccccc2)NC(=O)[C@H](CSC)NC(=O)Cc3ccc(cc3)N)O)C(=O)N[C@H]4c5ccccc5C[C@H]4O)C" 
8VO SMILES           "OpenEye OEToolkits" 2.0.6 "CC1(C(N(CS1)C(=O)C(C(Cc2ccccc2)NC(=O)C(CSC)NC(=O)Cc3ccc(cc3)N)O)C(=O)NC4c5ccccc5CC4O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8VO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"(4~{R})-3-[(2~{S},3~{S})-3-[[(2~{R})-2-[2-(4-aminophenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-~{N}-[(1~{S},2~{R})-2-oxidanyl-2,3-dihydro-1~{H}-inden-1-yl]-1,3-thiazolidine-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8VO "Create component" 2017-10-04 PDBJ 
8VO "Initial release"  2018-07-11 RCSB 
# 
