data_5GO
#

_chem_comp.id                                   5GO
_chem_comp.name                                 "4-O-(3-O-sulfo-beta-D-galactopyranosyl)-beta-D-glucopyranose"
_chem_comp.type                                 saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C12 H22 O14 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-09-24
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       422.360
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5GO
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5DUW
_chem_comp.pdbx_subcomponent_list               "BGC SGA"
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
5GO  "C2'"  C8   C  0  1  N  N  R  76.223  -19.219  -51.087  -4.247   0.788   0.018  BGC  1  C2    polymer  1   1  
5GO  "C3'"  C9   C  0  1  N  N  R  76.690  -17.952  -51.781  -2.842   0.657  -0.580  BGC  1  C3    polymer  1   2  
5GO  "C4'"  C10  C  0  1  N  N  S  77.094  -16.879  -50.770  -2.141  -0.549   0.052  BGC  1  C4    polymer  1   3  
5GO  "C5'"  C11  C  0  1  N  N  R  78.053  -17.471  -49.744  -2.990  -1.802  -0.179  BGC  1  C5    polymer  1   4  
5GO  "C6'"  C12  C  0  1  N  N  N  78.468  -16.472  -48.674  -2.326  -3.001   0.501  BGC  1  C6    polymer  1   5  
5GO  "C1'"  C7   C  0  1  N  N  R  77.239  -19.664  -50.037  -5.014  -0.516  -0.212  BGC  1  C1    polymer  1   6  
5GO  "O1'"  O7   O  0  1  N  N  N  76.660  -20.775  -49.355  -6.306  -0.422   0.391  BGC  1  O1    polymer  1   7  
5GO  "O2'"  O8   O  0  1  N  N  N  76.055  -20.247  -52.075  -4.938   1.867  -0.615  BGC  1  O2    polymer  1   8  
5GO  "O3'"  O9   O  0  1  N  N  N  75.655  -17.486  -52.643  -2.094   1.843  -0.305  BGC  1  O3    polymer  1   9  
5GO  O1     O1   O  0  1  N  N  N  77.720  -15.838  -51.522  -0.857  -0.725  -0.550  BGC  1  O4    polymer  1  10  
5GO  "O5'"  O10  O  0  1  N  N  N  77.440  -18.597  -49.107  -4.292  -1.602   0.373  BGC  1  O5    polymer  1  11  
5GO  "O6'"  O11  O  0  1  N  N  N  77.350  -15.952  -47.958  -3.055  -4.190   0.188  BGC  1  O6    polymer  1  12  
5GO  C1     C1   C  0  1  N  N  S  77.228  -14.546  -51.176   0.195  -0.015   0.108  SGA  2  C1    polymer  1  13  
5GO  C2     C2   C  0  1  N  N  R  78.033  -13.583  -52.026   1.535  -0.372  -0.542  SGA  2  C2    polymer  1  14  
5GO  C3     C3   C  0  1  N  N  S  77.503  -12.160  -51.942   2.650   0.437   0.128  SGA  2  C3    polymer  1  15  
5GO  C4     C4   C  0  1  N  N  S  75.978  -12.134  -52.107   2.325   1.929   0.009  SGA  2  C4    polymer  1  16  
5GO  C5     C5   C  0  1  N  N  R  75.309  -13.166  -51.191   0.955   2.197   0.637  SGA  2  C5    polymer  1  17  
5GO  C6     C6   C  0  1  N  N  N  73.796  -13.269  -51.364   0.596   3.675   0.470  SGA  2  C6    polymer  1  18  
5GO  O2     O2   O  0  1  N  N  N  79.393  -13.603  -51.561   1.791  -1.768  -0.374  SGA  2  O2    polymer  1  19  
5GO  O3     O3   O  0  1  N  N  N  78.152  -11.411  -52.964   3.894   0.164  -0.519  SGA  2  O3    polymer  1  20  
5GO  O4     O4   O  0  1  N  N  N  75.689  -12.447  -53.476   2.300   2.304  -1.369  SGA  2  O4    polymer  1  21  
5GO  O5     O5   O  0  1  N  N  N  75.837  -14.471  -51.477  -0.031   1.391  -0.011  SGA  2  O5    polymer  1  22  
5GO  O6     O6   O  0  1  N  N  N  73.273  -14.298  -50.503  -0.627   3.950   1.156  SGA  2  O6    polymer  1  23  
5GO  S      S1   S  0  1  N  N  N  78.455   -9.880  -52.692   4.718  -0.923   0.157  SGA  2  S     polymer  1  24  
5GO  OS1    O12  O  0  1  N  N  N  77.311   -9.132  -52.146   5.985  -0.923  -0.485  SGA  2  O1S   polymer  1  25  
5GO  OS2    O13  O  0  1  N  N  N  78.882   -9.324  -54.009   4.555  -0.738   1.556  SGA  2  O2S   polymer  1  26  
5GO  OS3    O14  O  0  1  N  N  N  79.602   -9.932  -51.809   4.066  -2.257  -0.179  SGA  2  O3S   polymer  1  27  
5GO  H12    H12  H  0  1  N  N  N  75.264  -19.018  -50.587  -4.171   0.982   1.088  BGC  1  H2    polymer  1  28  
5GO  H13    H13  H  0  1  N  N  N  77.577  -18.201  -52.382  -2.917   0.512  -1.657  BGC  1  H3    polymer  1  29  
5GO  H14    H14  H  0  1  N  N  N  76.196  -16.504  -50.257  -2.021  -0.382   1.122  BGC  1  H4    polymer  1  30  
5GO  H15    H15  H  0  1  N  N  N  78.959  -17.801  -50.274  -3.074  -1.991  -1.250  BGC  1  H5    polymer  1  31  
5GO  H16    H16  H  0  1  N  N  N  79.141  -16.974  -47.963  -1.301  -3.099   0.144  BGC  1  H6C1  polymer  1  32  
5GO  H17    H17  H  0  1  N  N  N  78.999  -15.638  -49.156  -2.322  -2.851   1.580  BGC  1  H6C2  polymer  1  33  
5GO  H11    H11  H  0  1  N  N  N  78.182  -19.946  -50.528  -5.125  -0.689  -1.283  BGC  1  H1    polymer  1  34  
5GO  H18    H18  H  0  1  N  N  N  77.261  -21.086  -48.689  -6.848  -1.216   0.286  BGC  1  HA    polymer  1  35  
5GO  H19    H19  H  0  1  N  N  N  75.763  -21.047  -51.654  -5.837   2.004  -0.288  BGC  1  HB    polymer  1  36  
5GO  H20    H20  H  0  1  N  N  N  75.940  -16.693  -53.081  -2.484   2.648  -0.671  BGC  1  HC    polymer  1  37  
5GO  H21    H21  H  0  1  N  N  N  77.653  -15.335  -47.302  -2.689  -4.991   0.586  BGC  1  H6    polymer  1  38  
5GO  H1     H1   H  0  1  N  N  N  77.408  -14.333  -50.112   0.217  -0.292   1.161  SGA  2  H1    polymer  1  39  
5GO  H2     H2   H  0  1  N  N  N  77.991  -13.915  -53.074   1.500  -0.132  -1.605  SGA  2  H2    polymer  1  40  
5GO  H3     H3   H  0  1  N  N  N  77.755  -11.747  -50.954   2.718   0.162   1.181  SGA  2  H3    polymer  1  41  
5GO  H4     H4   H  0  1  N  N  N  75.605  -11.131  -51.853   3.085   2.510   0.532  SGA  2  H4    polymer  1  42  
5GO  H5     H5   H  0  1  N  N  N  75.525  -12.897  -50.146   0.986   1.949   1.698  SGA  2  H5    polymer  1  43  
5GO  H6     H6   H  0  1  N  N  N  73.333  -12.306  -51.104   1.393   4.292   0.886  SGA  2  H61   polymer  1  44  
5GO  H7     H7   H  0  1  N  N  N  73.565  -13.517  -52.410   0.477   3.902  -0.590  SGA  2  H62   polymer  1  45  
5GO  H8     H8   H  0  1  N  N  N  79.732  -14.489  -51.610   1.123  -2.341  -0.775  SGA  2  HO2   polymer  1  46  
5GO  H9     H9   H  0  1  N  N  N  74.749  -12.439  -53.611   2.099   3.238  -1.519  SGA  2  HO4   polymer  1  47  
5GO  H10    H10  H  0  1  N  N  N  72.332  -14.357  -50.615  -0.915   4.870   1.092  SGA  2  HO6   polymer  1  48  
5GO  H22    H22  H  0  1  N  N  N  80.368   -9.602  -52.264   4.515  -3.022   0.205  SGA  2  HOS3  polymer  1  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5GO  OS2    S      DOUB  N  N   1  
5GO  O4     C4     SING  N  N   2  
5GO  O3     S      SING  N  N   3  
5GO  O3     C3     SING  N  N   4  
5GO  S      OS1    DOUB  N  N   5  
5GO  S      OS3    SING  N  N   6  
5GO  "O3'"  "C3'"  SING  N  N   7  
5GO  C4     C3     SING  N  N   8  
5GO  C4     C5     SING  N  N   9  
5GO  "O2'"  "C2'"  SING  N  N  10  
5GO  C2     C3     SING  N  N  11  
5GO  C2     O2     SING  N  N  12  
5GO  C2     C1     SING  N  N  13  
5GO  "C3'"  "C2'"  SING  N  N  14  
5GO  "C3'"  "C4'"  SING  N  N  15  
5GO  O1     C1     SING  N  N  16  
5GO  O1     "C4'"  SING  N  N  17  
5GO  O5     C5     SING  N  N  18  
5GO  O5     C1     SING  N  N  19  
5GO  C6     C5     SING  N  N  20  
5GO  C6     O6     SING  N  N  21  
5GO  "C2'"  "C1'"  SING  N  N  22  
5GO  "C4'"  "C5'"  SING  N  N  23  
5GO  "C1'"  "O1'"  SING  N  N  24  
5GO  "C1'"  "O5'"  SING  N  N  25  
5GO  "C5'"  "O5'"  SING  N  N  26  
5GO  "C5'"  "C6'"  SING  N  N  27  
5GO  "C6'"  "O6'"  SING  N  N  28  
5GO  C1     H1     SING  N  N  29  
5GO  C2     H2     SING  N  N  30  
5GO  C3     H3     SING  N  N  31  
5GO  C4     H4     SING  N  N  32  
5GO  C5     H5     SING  N  N  33  
5GO  C6     H6     SING  N  N  34  
5GO  C6     H7     SING  N  N  35  
5GO  O2     H8     SING  N  N  36  
5GO  O4     H9     SING  N  N  37  
5GO  O6     H10    SING  N  N  38  
5GO  "C1'"  H11    SING  N  N  39  
5GO  "C2'"  H12    SING  N  N  40  
5GO  "C3'"  H13    SING  N  N  41  
5GO  "C4'"  H14    SING  N  N  42  
5GO  "C5'"  H15    SING  N  N  43  
5GO  "C6'"  H16    SING  N  N  44  
5GO  "C6'"  H17    SING  N  N  45  
5GO  "O1'"  H18    SING  N  N  46  
5GO  "O2'"  H19    SING  N  N  47  
5GO  "O3'"  H20    SING  N  N  48  
5GO  "O6'"  H21    SING  N  N  49  
5GO  OS3    H22    SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5GO  SMILES            ACDLabs               12.01  "C1(C(C(C(C(CO)O1)O)OS(=O)(O)=O)O)OC2C(C(C(O)OC2CO)O)O"  
5GO  InChI             InChI                 1.03   "InChI=1S/C12H22O14S/c13-1-3-5(15)10(26-27(20,21)22)8(18)12(24-3)25-9-4(2-14)23-11(19)7(17)6(9)16/h3-19H,1-2H2,(H,20,21,22)/t3-,4-,5+,6-,7-,8-,9-,10+,11-,12+/m1/s1"  
5GO  InChIKey          InChI                 1.03   ZMPFTLRVVIHHOO-QFKDBGNMSA-N  
5GO  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O)O[C@@H]2CO)[C@H](O)[C@@H](O[S](O)(=O)=O)[C@H]1O"  
5GO  SMILES            CACTVS                3.385  "OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O)O[CH]2CO)[CH](O)[CH](O[S](O)(=O)=O)[CH]1O"  
5GO  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)O)O)CO)O)OS(=O)(=O)O)O)O"  
5GO  SMILES            "OpenEye OEToolkits"  1.9.2  "C(C1C(C(C(C(O1)OC2C(OC(C(C2O)O)O)CO)O)OS(=O)(=O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5GO  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-O-(3-O-sulfo-beta-D-galactopyranosyl)-beta-D-glucopyranose"  
5GO  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "[(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[(2R,3S,4R,5R,6R)-2-(hydroxymethyl)-4,5,6-tris(oxidanyl)oxan-3-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5GO  "Create component"    2015-09-24  RCSB  
5GO  "Initial release"     2016-02-17  RCSB  
5GO  "Other modification"  2020-07-03  RCSB  
5GO  "Obsolete component"  2020-07-17  RCSB  
##
