data_ZPN
# 
_chem_comp.id                                    ZPN 
_chem_comp.name                                  "(2Z,4E)-N-[(S)-[(1S,2E,5S,8E,10Z,17S)-3,11-dimethyl-19-methylidene-7,13-dioxo-6,21-dioxabicyclo[15.3.1]henicosa-2,8,10-trien-5-yl](hydroxy)methyl]hexa-2,4-dienamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H39 N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(-)-ZAMPANOLIDE (Bound form)" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-12-20 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        497.623 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZPN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4I4T 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZPN C1     C1     C 0 1 N N N N N N -0.054 -2.210 -39.137 -1.086  1.273  -0.057 C1     ZPN 1  
ZPN O1     O1     O 0 1 N N N N N N 0.754  -3.142 -39.137 -1.184  1.359  -1.267 O1     ZPN 2  
ZPN C2     C2     C 0 1 N N N N N N -0.593 -1.579 -40.331 -0.438  2.305  0.667  C2     ZPN 3  
ZPN C3     C3     C 0 1 N N N N N N -0.072 -1.774 -41.555 0.347   3.179  -0.003 C3     ZPN 4  
ZPN C4     C4     C 0 1 N N N N N N -0.591 -1.001 -42.668 1.046   4.256  0.695  C4     ZPN 5  
ZPN C5     C5     C 0 1 N N N N N N -0.049 -1.062 -43.887 2.321   4.510  0.376  C5     ZPN 6  
ZPN C21    C21    C 0 1 N N N N N N -0.404 -0.045 -44.934 3.055   5.627  1.067  C21    ZPN 7  
ZPN C6     C6     C 0 1 N N N N N N 1.190  -1.877 -44.116 3.019   3.669  -0.660 C6     ZPN 8  
ZPN C7     C7     C 0 1 N N N N N N 2.332  -0.915 -44.227 4.313   3.143  -0.096 C7     ZPN 9  
ZPN O7     O7     O 0 1 N N N N N N 2.993  -0.862 -45.260 5.282   3.862  -0.042 O7     ZPN 10 
ZPN C8     C8     C 0 1 N N N N N N 2.270  0.260  -43.298 4.402   1.724  0.402  C8     ZPN 11 
ZPN C9     C9     C 0 1 N N N N N N 3.569  0.360  -42.495 4.562   0.774  -0.785 C9     ZPN 12 
ZPN C10    C10    C 0 1 N N N N N N 3.480  1.616  -41.608 5.555   -0.334 -0.431 C10    ZPN 13 
ZPN C11    C11    C 0 1 N N S N N N 3.800  1.468  -40.117 4.896   -1.697 -0.654 C11    ZPN 14 
ZPN C12    C12    C 0 1 N N N N N N 4.170  2.871  -39.626 5.812   -2.798 -0.117 C12    ZPN 15 
ZPN C13    C13    C 0 1 N N N N N N 4.236  2.904  -38.123 5.004   -3.738 0.742  C13    ZPN 16 
ZPN C22    C22    C 0 1 N N N N N N 5.302  3.384  -37.487 5.502   -4.201 1.861  C22    ZPN 17 
ZPN C14    C14    C 0 1 N N N N N N 3.097  2.247  -37.403 3.619   -4.141 0.304  C14    ZPN 18 
ZPN C15    C15    C 0 1 N N S N N N 2.883  0.851  -38.012 2.874   -2.912 -0.222 C15    ZPN 19 
ZPN O11    O11    O 0 1 N N N N N N 2.651  0.994  -39.419 3.648   -1.739 0.041  O11    ZPN 20 
ZPN C16    C16    C 0 1 N N N N N N 1.688  0.203  -37.363 1.537   -2.787 0.462  C16    ZPN 21 
ZPN C17    C17    C 0 1 N N N N N N 1.678  -1.038 -36.850 0.528   -2.214 -0.154 C17    ZPN 22 
ZPN C23    C23    C 0 1 N N N N N N 2.904  -1.881 -36.635 0.707   -1.696 -1.558 C23    ZPN 23 
ZPN C18    C18    C 0 1 N N N N N N 0.547  -1.481 -35.994 -0.806  -2.085 0.536  C18    ZPN 24 
ZPN C19    C19    C 0 1 N N S N N N -0.469 -2.350 -36.766 -1.658  -1.021 -0.159 C19    ZPN 25 
ZPN O19    O19    O 0 1 N N N N N N -0.870 -2.042 -38.104 -1.597  0.203  0.576  O19    ZPN 26 
ZPN C20    C20    C 0 1 N N S N N N -1.492 -3.098 -35.916 -3.109  -1.499 -0.232 C20    ZPN 27 
ZPN O20    O20    O 0 1 N N N N N N -2.004 -4.268 -36.540 -3.172  -2.719 -0.973 O20    ZPN 28 
ZPN N20    N20    N 0 1 N N N N N N -2.533 -2.077 -35.747 -3.926  -0.481 -0.897 N20    ZPN 29 
ZPN "C1'"  "C1'"  C 0 1 N N N N N N -3.376 -2.125 -34.693 -5.165  -0.207 -0.441 "C1'"  ZPN 30 
ZPN "O1'"  "O1'"  O 0 1 N N N N N N -3.223 -3.023 -33.847 -5.604  -0.805 0.523  "O1'"  ZPN 31 
ZPN "C2'"  "C2'"  C 0 1 N N N N N N -4.368 -1.047 -34.693 -5.980  0.809  -1.106 "C2'"  ZPN 32 
ZPN "C3'"  "C3'"  C 0 1 N N N N N N -5.409 -0.980 -33.827 -7.259  1.010  -0.717 "C3'"  ZPN 33 
ZPN "C4'"  "C4'"  C 0 1 N N N N N N -5.513 -1.770 -32.607 -7.882  0.101  0.246  "C4'"  ZPN 34 
ZPN "C5'"  "C5'"  C 0 1 N N N N N N -6.593 -1.668 -31.814 -9.097  0.370  0.728  "C5'"  ZPN 35 
ZPN "C6'"  "C6'"  C 0 1 N N N N N N -6.821 -2.507 -30.589 -9.738  -0.566 1.719  "C6'"  ZPN 36 
ZPN H21    H21    H 0 1 N N N N N N -1.448 -0.926 -40.230 -0.541  2.374  1.737  H21    ZPN 37 
ZPN H31    H31    H 0 1 N N N N N N 0.719  -2.493 -41.707 0.453   3.082  -1.074 H31    ZPN 38 
ZPN H41    H41    H 0 1 N N N N N N -1.442 -0.356 -42.505 0.573   4.807  1.482  H41    ZPN 39 
ZPN H211   H211   H 0 0 N N N N N N -1.327 0.476  -44.641 2.391   6.108  1.786  H211   ZPN 40 
ZPN H212   H212   H 0 0 N N N N N N 0.414  0.684  -45.029 3.923   5.224  1.588  H212   ZPN 41 
ZPN H213   H213   H 0 0 N N N N N N -0.559 -0.551 -45.899 3.382   6.359  0.328  H213   ZPN 42 
ZPN H62    H62    H 0 1 N N N N N N 1.094  -2.458 -45.045 2.379   2.832  -0.940 H62    ZPN 43 
ZPN H61    H61    H 0 1 N N N N N N 1.353  -2.562 -43.271 3.228   4.276  -1.541 H61    ZPN 44 
ZPN H81    H81    H 0 1 N N N N N N 2.132  1.181  -43.884 5.261   1.625  1.065  H81    ZPN 45 
ZPN H82    H82    H 0 1 N N N N N N 1.423  0.134  -42.607 3.492   1.473  0.947  H82    ZPN 46 
ZPN H91    H91    H 0 1 N N N N N N 3.690  -0.534 -41.866 3.596   0.331  -1.028 H91    ZPN 47 
ZPN H92    H92    H 0 1 N Y N N N N 4.426  0.445  -43.179 4.932   1.330  -1.646 H92    ZPN 48 
ZPN H102   H102   H 0 0 N N N N N N 4.179  2.358  -42.021 6.437   -0.248 -1.065 H102   ZPN 49 
ZPN H162   H162   H 0 0 N N N N N N 2.452  1.999  -41.685 5.848   -0.238 0.615  H162   ZPN 50 
ZPN H141   H141   H 0 0 N N N N N N 4.656  0.790  -39.986 4.722   -1.852 -1.718 H141   ZPN 51 
ZPN H151   H151   H 0 0 N N N N N N 5.151  3.151  -40.037 6.247   -3.349 -0.951 H151   ZPN 52 
ZPN H142   H142   H 0 0 N N N N N N 3.410  3.587  -39.971 6.607   -2.352 0.481  H142   ZPN 53 
ZPN H223   H223   H 0 0 N N N N N N 5.369  3.308  -36.412 6.494   -3.910 2.172  H223   ZPN 54 
ZPN H222   H222   H 0 0 N N N N N N 6.100  3.850  -38.046 4.919   -4.874 2.474  H222   ZPN 55 
ZPN H121   H121   H 0 0 N N N N N N 3.337  2.154  -36.334 3.690   -4.888 -0.487 H121   ZPN 56 
ZPN H122   H122   H 0 0 N N N N N N 2.184  2.849  -37.523 3.077   -4.560 1.151  H122   ZPN 57 
ZPN H111   H111   H 0 0 N N N N N N 3.778  0.238  -37.829 2.721   -3.022 -1.296 H111   ZPN 58 
ZPN H101   H101   H 0 0 N N N N N N 0.775  0.777  -37.306 1.414   -3.163 1.463  H101   ZPN 59 
ZPN H231   H231   H 0 0 N N N N N N 2.612  -2.850 -36.204 1.749   -1.807 -1.856 H231   ZPN 60 
ZPN H232   H232   H 0 0 N N N N N N 3.409  -2.046 -37.598 0.072   -2.264 -2.238 H232   ZPN 61 
ZPN H233   H233   H 0 0 N N N N N N 3.588  -1.364 -35.946 0.428   -0.643 -1.595 H233   ZPN 62 
ZPN H181   H181   H 0 0 N N N N N N 0.948  -2.068 -35.154 -1.325  -3.043 0.502  H181   ZPN 63 
ZPN H182   H182   H 0 0 N N N N N N 0.028  -0.592 -35.606 -0.648  -1.796 1.575  H182   ZPN 64 
ZPN H191   H191   H 0 0 N N N N N N 0.195  -3.198 -36.987 -1.280  -0.856 -1.168 H191   ZPN 65 
ZPN H201   H201   H 0 0 N N N N N N -1.043 -3.342 -34.942 -3.487  -1.666 0.777  H201   ZPN 66 
ZPN H202   H202   H 0 0 N N N N N N -2.632 -4.686 -35.963 -2.851  -2.645 -1.881 H202   ZPN 67 
ZPN H203   H203   H 0 0 N N N N N N -2.619 -1.340 -36.418 -3.576  -0.004 -1.666 H203   ZPN 68 
ZPN "H2'1" "H2'1" H 0 0 N N N N N N -4.264 -0.260 -35.425 -5.560  1.400  -1.907 "H2'1" ZPN 69 
ZPN "H3'1" "H3'1" H 0 0 N N N N N N -6.213 -0.297 -34.056 -7.821  1.840  -1.117 "H3'1" ZPN 70 
ZPN "H4'1" "H4'1" H 0 0 N N N N N N -4.714 -2.444 -32.337 -7.359  -0.788 0.567  "H4'1" ZPN 71 
ZPN H6     H6     H 0 1 N N N N N N -7.344 -0.937 -32.074 -9.620  1.258  0.407  H6     ZPN 72 
ZPN H7     H7     H 0 1 N N N N N N -7.777 -2.225 -30.123 -9.846  -1.554 1.270  H7     ZPN 73 
ZPN H8     H8     H 0 1 N N N N N N -6.851 -3.569 -30.873 -9.112  -0.638 2.609  H8     ZPN 74 
ZPN H9     H9     H 0 1 N N N N N N -6.002 -2.342 -29.874 -10.721 -0.184 1.997  H9     ZPN 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZPN O7    C7     DOUB N N 1  
ZPN C21   C5     SING N N 2  
ZPN C7    C6     SING N N 3  
ZPN C7    C8     SING N N 4  
ZPN C6    C5     SING N N 5  
ZPN C5    C4     DOUB N Z 6  
ZPN C8    C9     SING N N 7  
ZPN C4    C3     SING N N 8  
ZPN C9    C10    SING N N 9  
ZPN C10   C11    SING N N 10 
ZPN C3    C2     DOUB N E 11 
ZPN C2    C1     SING N N 12 
ZPN C11   C12    SING N N 13 
ZPN C11   O11    SING N N 14 
ZPN C12   C13    SING N N 15 
ZPN O11   C15    SING N N 16 
ZPN O1    C1     DOUB N N 17 
ZPN C1    O19    SING N N 18 
ZPN C13   C22    DOUB N N 19 
ZPN C13   C14    SING N N 20 
ZPN O19   C19    SING N N 21 
ZPN C15   C14    SING N N 22 
ZPN C15   C16    SING N N 23 
ZPN C16   C17    DOUB N E 24 
ZPN C17   C23    SING N N 25 
ZPN C17   C18    SING N N 26 
ZPN C19   C18    SING N N 27 
ZPN C19   C20    SING N N 28 
ZPN O20   C20    SING N N 29 
ZPN C20   N20    SING N N 30 
ZPN N20   "C1'"  SING N N 31 
ZPN "C2'" "C1'"  SING N N 32 
ZPN "C2'" "C3'"  DOUB N Z 33 
ZPN "C1'" "O1'"  DOUB N N 34 
ZPN "C3'" "C4'"  SING N N 35 
ZPN "C4'" "C5'"  DOUB N E 36 
ZPN "C5'" "C6'"  SING N N 37 
ZPN C2    H21    SING N N 38 
ZPN C3    H31    SING N N 39 
ZPN C4    H41    SING N N 40 
ZPN C21   H211   SING N N 41 
ZPN C21   H212   SING N N 42 
ZPN C21   H213   SING N N 43 
ZPN C6    H62    SING N N 44 
ZPN C6    H61    SING N N 45 
ZPN C8    H81    SING N N 46 
ZPN C8    H82    SING N N 47 
ZPN C9    H91    SING N N 48 
ZPN C9    H92    SING N N 49 
ZPN C10   H102   SING N N 50 
ZPN C10   H162   SING N N 51 
ZPN C11   H141   SING N N 52 
ZPN C12   H151   SING N N 53 
ZPN C12   H142   SING N N 54 
ZPN C22   H223   SING N N 55 
ZPN C22   H222   SING N N 56 
ZPN C14   H121   SING N N 57 
ZPN C14   H122   SING N N 58 
ZPN C15   H111   SING N N 59 
ZPN C16   H101   SING N N 60 
ZPN C23   H231   SING N N 61 
ZPN C23   H232   SING N N 62 
ZPN C23   H233   SING N N 63 
ZPN C18   H181   SING N N 64 
ZPN C18   H182   SING N N 65 
ZPN C19   H191   SING N N 66 
ZPN C20   H201   SING N N 67 
ZPN O20   H202   SING N N 68 
ZPN N20   H203   SING N N 69 
ZPN "C2'" "H2'1" SING N N 70 
ZPN "C3'" "H3'1" SING N N 71 
ZPN "C4'" "H4'1" SING N N 72 
ZPN "C5'" H6     SING N N 73 
ZPN "C6'" H7     SING N N 74 
ZPN "C6'" H8     SING N N 75 
ZPN "C6'" H9     SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZPN SMILES           ACDLabs              12.01 "O=C(/C=C\C=C\C)NC(O)C1OC(=O)C=CC=C(CC(=O)CCCC2OC(C=C(C)C1)CC(=C)/C2)C"                                                                                                                                                                                    
ZPN InChI            InChI                1.03  "InChI=1S/C29H39NO6/c1-5-6-7-13-27(32)30-29(34)26-19-22(4)18-25-17-21(3)16-24(35-25)12-9-11-23(31)15-20(2)10-8-14-28(33)36-26/h5-8,10,13-14,18,24-26,29,34H,3,9,11-12,15-17,19H2,1-2,4H3,(H,30,32)/b6-5+,13-7-,14-8+,20-10-,22-18+/t24-,25-,26-,29-/m0/s1" 
ZPN InChIKey         InChI                1.03  KNEMNZWQWFRUIB-KZVIXHMTSA-N                                                                                                                                                                                                                                
ZPN SMILES_CANONICAL CACTVS               3.370 "C\C=C\C=C/C(=O)N[C@@H](O)[C@@H]1CC(=C/[C@@H]2CC(=C)C[C@H](CCCC(=O)CC(=C\C=C\C(=O)O1)/C)O2)/C"                                                                                                                                                             
ZPN SMILES           CACTVS               3.370 "CC=CC=CC(=O)N[CH](O)[CH]1CC(=C[CH]2CC(=C)C[CH](CCCC(=O)CC(=CC=CC(=O)O1)C)O2)C"                                                                                                                                                                            
ZPN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C/C=C/C=C\C(=O)N[C@H]([C@@H]1C/C(=C/[C@@H]2CC(=C)C[C@@H](O2)CCCC(=O)C/C(=C\C=C\C(=O)O1)/C)/C)O"                                                                                                                                                           
ZPN SMILES           "OpenEye OEToolkits" 1.7.6 "CC=CC=CC(=O)NC(C1CC(=CC2CC(=C)CC(O2)CCCC(=O)CC(=CC=CC(=O)O1)C)C)O"                                                                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZPN "SYSTEMATIC NAME" ACDLabs              12.01 "(2Z,4E)-N-[(S)-[(1S,2E,5S,8E,10Z,17S)-3,11-dimethyl-19-methylidene-7,13-dioxo-6,21-dioxabicyclo[15.3.1]henicosa-2,8,10-trien-5-yl](hydroxy)methyl]hexa-2,4-dienamide"                  
ZPN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2Z,4E)-N-[(S)-[(1S,7Z,9E,13S,15E,17S)-7,15-dimethyl-19-methylidene-5,11-bis(oxidanylidene)-12,21-dioxabicyclo[15.3.1]henicosa-7,9,15-trien-13-yl]-oxidanyl-methyl]hexa-2,4-dienamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZPN "Create component"   2012-12-20 RCSB 
ZPN "Other modification" 2013-01-17 RCSB 
ZPN "Initial release"    2013-01-18 RCSB 
ZPN "Modify synonyms"    2021-03-01 PDBE 
ZPN "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      ZPN 
_pdbx_chem_comp_synonyms.name         "(-)-ZAMPANOLIDE (Bound form)" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            ZPN 
_pdbx_chem_comp_pcm.modified_residue_id                HIS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C9 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NE2 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
