data_Y5N
# 
_chem_comp.id                                    Y5N 
_chem_comp.name                                  "3-chloranyl-~{N}-[(1~{S})-1-(6-chloranylpyridin-3-yl)-2-phenyl-ethyl]aniline" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H16 Cl2 N2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-21 
_chem_comp.pdbx_modified_date                    2024-01-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        343.250 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y5N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8R5R 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y5N C4  C1  C  0 1 Y N N N N N -30.580 23.137 -24.597 -1.261 -1.974 2.089  C4  Y5N 1  
Y5N C5  C2  C  0 1 Y N N N N N -29.648 22.114 -24.453 -0.834 -1.242 0.988  C5  Y5N 2  
Y5N C8  C3  C  0 1 Y N N N N N -29.383 18.387 -26.460 -2.443 2.237  -0.198 C8  Y5N 3  
Y5N C10 C4  C  0 1 Y N N N N N -31.634 17.568 -26.637 -4.400 2.191  -1.577 C10 Y5N 4  
Y5N C13 C5  C  0 1 Y N N N N N -29.044 17.213 -25.798 -3.234 2.105  0.928  C13 Y5N 5  
Y5N C17 C6  C  0 1 Y N N N N N -26.548 22.225 -26.216 1.838  1.224  1.087  C17 Y5N 6  
Y5N CL1 CL1 CL 0 0 N N N N N N -28.909 22.232 -20.551 -0.005 -4.106 -1.676 CL1 Y5N 7  
Y5N C1  C7  C  0 1 Y N N N N N -29.552 22.584 -22.122 -0.492 -3.281 -0.228 C1  Y5N 8  
Y5N C2  C8  C  0 1 Y N N N N N -30.474 23.595 -22.253 -0.908 -4.007 0.875  C2  Y5N 9  
Y5N C3  C9  C  0 1 Y N N N N N -30.996 23.863 -23.496 -1.296 -3.353 2.030  C3  Y5N 10 
Y5N N   N1  N  0 1 N N N N N N -29.239 21.384 -25.575 -0.792 0.153  1.048  N   Y5N 11 
Y5N CA  C10 C  0 1 N N S N N N -28.168 20.402 -25.543 -0.342 0.923  -0.115 CA  Y5N 12 
Y5N C   C11 C  0 1 N N N N N N -28.353 19.445 -26.724 -0.946 2.328  -0.060 C   Y5N 13 
Y5N C9  C12 C  0 1 Y N N N N N -30.692 18.555 -26.872 -3.026 2.280  -1.451 C9  Y5N 14 
Y5N C11 C13 C  0 1 Y N N N N N -31.282 16.415 -25.973 -5.192 2.070  -0.450 C11 Y5N 15 
Y5N C12 C14 C  0 1 Y N N N N N -29.990 16.227 -25.568 -4.608 2.021  0.802  C12 Y5N 16 
Y5N CB  C15 C  0 1 Y N N N N N -26.781 21.005 -25.603 1.161  1.020  -0.101 CB  Y5N 17 
Y5N CG  C16 C  0 1 Y N N N N N -25.681 20.356 -25.074 1.883  0.908  -1.280 CG  Y5N 18 
Y5N CD  C17 C  0 1 Y N N N N N -24.424 20.919 -25.157 3.264  1.005  -1.220 CD  Y5N 19 
Y5N NZ  N2  N  0 1 Y N N N N N -25.341 22.800 -26.317 3.154  1.311  1.107  NZ  Y5N 20 
Y5N CE  C18 C  0 1 Y N N N N N -24.327 22.129 -25.792 3.873  1.209  0.006  CE  Y5N 21 
Y5N CL2 CL2 CL 0 0 N N N N N N -22.760 22.864 -25.940 5.602  1.332  0.095  CL2 Y5N 22 
Y5N C19 C19 C  0 1 Y N N N N N -29.123 21.840 -23.198 -0.450 -1.901 -0.173 C19 Y5N 23 
Y5N H3  H1  H  0 1 N N N N N N -30.981 23.365 -25.574 -1.560 -1.464 2.993  H3  Y5N 24 
Y5N H9  H2  H  0 1 N N N N N N -32.650 17.704 -26.976 -4.856 2.225  -2.556 H9  Y5N 25 
Y5N H12 H3  H  0 1 N N N N N N -28.029 17.067 -25.458 -2.778 2.067  1.907  H12 Y5N 26 
Y5N H15 H4  H  0 1 N N N N N N -27.393 22.747 -26.640 1.283  1.317  2.008  H15 Y5N 27 
Y5N H1  H5  H  0 1 N N N N N N -30.783 24.170 -21.393 -0.929 -5.086 0.833  H1  Y5N 28 
Y5N H2  H6  H  0 1 N N N N N N -31.734 24.643 -23.613 -1.627 -3.921 2.886  H2  Y5N 29 
Y5N H4  H7  H  0 1 N N N N N N -30.050 20.894 -25.894 -1.061 0.612  1.859  H4  Y5N 30 
Y5N H5  H8  H  0 1 N N N N N N -28.248 19.816 -24.616 -0.665 0.423  -1.028 H5  Y5N 31 
Y5N H6  H9  H  0 1 N N N N N N -28.665 20.028 -27.603 -0.541 2.928  -0.876 H6  Y5N 32 
Y5N H7  H10 H  0 1 N N N N N N -27.391 18.954 -26.933 -0.696 2.794  0.893  H7  Y5N 33 
Y5N H8  H11 H  0 1 N N N N N N -30.982 19.463 -27.381 -2.409 2.383  -2.330 H8  Y5N 34 
Y5N H10 H12 H  0 1 N N N N N N -32.026 15.659 -25.772 -6.265 2.000  -0.549 H10 Y5N 35 
Y5N H11 H13 H  0 1 N N N N N N -29.707 15.312 -25.070 -5.227 1.926  1.683  H11 Y5N 36 
Y5N H13 H14 H  0 1 N N N N N N -25.807 19.398 -24.591 1.380  0.749  -2.222 H13 Y5N 37 
Y5N H14 H15 H  0 1 N N N N N N -23.557 20.428 -24.741 3.858  0.922  -2.118 H14 Y5N 38 
Y5N H16 H16 H  0 1 N N N N N N -28.391 21.057 -23.068 -0.118 -1.335 -1.031 H16 Y5N 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y5N C1  CL1 SING N N 1  
Y5N C2  C1  DOUB Y N 2  
Y5N C3  C2  SING Y N 3  
Y5N C3  C4  DOUB Y N 4  
Y5N C4  C5  SING Y N 5  
Y5N C5  N   SING N N 6  
Y5N CA  N   SING N N 7  
Y5N C   CA  SING N N 8  
Y5N C   C8  SING N N 9  
Y5N C9  C8  DOUB Y N 10 
Y5N C10 C9  SING Y N 11 
Y5N C11 C10 DOUB Y N 12 
Y5N C12 C11 SING Y N 13 
Y5N C12 C13 DOUB Y N 14 
Y5N CB  CA  SING N N 15 
Y5N CG  CB  DOUB Y N 16 
Y5N CD  CG  SING Y N 17 
Y5N C17 CB  SING Y N 18 
Y5N C17 NZ  DOUB Y N 19 
Y5N CE  NZ  SING Y N 20 
Y5N CE  CL2 SING N N 21 
Y5N C19 C5  DOUB Y N 22 
Y5N C19 C1  SING Y N 23 
Y5N C13 C8  SING Y N 24 
Y5N CD  CE  DOUB Y N 25 
Y5N C4  H3  SING N N 26 
Y5N C10 H9  SING N N 27 
Y5N C13 H12 SING N N 28 
Y5N C17 H15 SING N N 29 
Y5N C2  H1  SING N N 30 
Y5N C3  H2  SING N N 31 
Y5N N   H4  SING N N 32 
Y5N CA  H5  SING N N 33 
Y5N C   H6  SING N N 34 
Y5N C   H7  SING N N 35 
Y5N C9  H8  SING N N 36 
Y5N C11 H10 SING N N 37 
Y5N C12 H11 SING N N 38 
Y5N CG  H13 SING N N 39 
Y5N CD  H14 SING N N 40 
Y5N C19 H16 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y5N InChI            InChI                1.06  "InChI=1S/C19H16Cl2N2/c20-16-7-4-8-17(12-16)23-18(11-14-5-2-1-3-6-14)15-9-10-19(21)22-13-15/h1-10,12-13,18,23H,11H2/t18-/m0/s1" 
Y5N InChIKey         InChI                1.06  FPQMXEJXTNDYME-SFHVURJKSA-N                                                                                                     
Y5N SMILES_CANONICAL CACTVS               3.385 "Clc1cccc(N[C@@H](Cc2ccccc2)c3ccc(Cl)nc3)c1"                                                                                    
Y5N SMILES           CACTVS               3.385 "Clc1cccc(N[CH](Cc2ccccc2)c3ccc(Cl)nc3)c1"                                                                                      
Y5N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C[C@@H](c2ccc(nc2)Cl)Nc3cccc(c3)Cl"                                                                                  
Y5N SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(c2ccc(nc2)Cl)Nc3cccc(c3)Cl"                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           Y5N 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-chloranyl-~{N}-[(1~{S})-1-(6-chloranylpyridin-3-yl)-2-phenyl-ethyl]aniline" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y5N "Create component" 2023-11-21 PDBE 
Y5N "Initial release"  2024-01-17 RCSB 
# 
