data_Y4N
# 
_chem_comp.id                                    Y4N 
_chem_comp.name                                  "N-[(3,4-dichlorophenyl)methyl]-2-{4-oxo-6-[4-(4-sulfamoylbutanoyl)piperazin-1-yl]quinazolin-3(4H)-yl}acetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H28 Cl2 N6 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-11 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        595.498 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y4N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G6X 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y4N C11  C1  C  0 1 Y N N N N N -12.491 8.708  46.142 7.886   -0.607 -0.763 C11  Y4N 1  
Y4N C13  C2  C  0 1 Y N N N N N -12.440 7.280  44.174 9.093   -2.665 -0.972 C13  Y4N 2  
Y4N C15  C3  C  0 1 Y N N N N N -11.072 9.321  44.361 10.135  -0.762 0.046  C15  Y4N 3  
Y4N C16  C4  C  0 1 Y N N N N N -11.559 9.640  45.606 8.983   -0.025 -0.154 C16  Y4N 4  
Y4N C17  C5  C  0 1 N N N N N N -12.875 8.843  47.580 6.633   0.199  -0.986 C17  Y4N 5  
Y4N C21  C6  C  0 1 Y N N N N N -17.954 14.792 42.960 -2.033  3.250  0.068  C21  Y4N 6  
Y4N C22  C7  C  0 1 Y N N N N N -16.624 14.497 42.602 -2.080  1.930  -0.381 C22  Y4N 7  
Y4N C23  C8  C  0 1 Y N N N N N -15.743 13.986 43.572 -0.983  1.098  -0.228 C23  Y4N 8  
Y4N C24  C9  C  0 1 Y N N N N N -18.343 14.508 44.278 -0.910  3.747  0.666  C24  Y4N 9  
Y4N C25  C10 C  0 1 Y N N N N N -17.465 13.969 45.239 0.210   2.930  0.833  C25  Y4N 10 
Y4N C26  C11 C  0 1 Y N N N N N -16.107 13.725 44.866 0.168   1.593  0.380  C26  Y4N 11 
Y4N C27  C12 C  0 1 N N N N N N -15.216 13.146 45.833 1.365   0.760  0.572  C27  Y4N 12 
Y4N N1   N1  N  0 1 N N N N N N -11.508 12.018 33.635 -11.706 -3.642 1.311  N1   Y4N 13 
Y4N S2   S1  S  0 1 N N N N N N -13.166 12.226 33.538 -11.369 -2.145 0.689  S2   Y4N 14 
Y4N C3   C13 C  0 1 N N N N N N -13.563 12.979 35.032 -9.580  -2.172 0.390  C3   Y4N 15 
Y4N C4   C14 C  0 1 N N N N N N -13.230 12.119 36.253 -9.140  -0.827 -0.192 C4   Y4N 16 
Y4N C5   C15 C  0 1 N N N N N N -13.526 12.870 37.527 -7.631  -0.850 -0.444 C5   Y4N 17 
Y4N C6   C16 C  0 1 N N N N N N -15.036 12.962 37.756 -7.198  0.475  -1.018 C6   Y4N 18 
Y4N N7   N2  N  0 1 N N N N N N -15.465 13.976 38.606 -5.901  0.686  -1.321 N7   Y4N 19 
Y4N O8   O1  O  0 1 N N N N N N -15.863 12.173 37.206 -8.015  1.350  -1.206 O8   Y4N 20 
Y4N O9   O2  O  0 1 N N N N N N -13.483 13.216 32.473 -12.079 -2.109 -0.542 O9   Y4N 21 
Y4N O10  O3  O  0 1 N N N N N N -13.731 10.950 33.471 -11.685 -1.248 1.744  O10  Y4N 22 
Y4N C12  C17 C  0 1 Y N N N N N -12.923 7.556  45.412 7.941   -1.926 -1.171 C12  Y4N 23 
Y4N C14  C18 C  0 1 Y N N N N N -11.510 8.171  43.639 10.191  -2.084 -0.364 C14  Y4N 24 
Y4N N18  N3  N  0 1 N N N N N N -13.251 10.199 47.960 5.749   0.058  0.174  N18  Y4N 25 
Y4N CL19 CL1 CL 0 0 N N N N N N -9.808  10.268 43.667 11.513  -0.031 0.809  CL19 Y4N 26 
Y4N CL20 CL2 CL 0 0 N N N N N N -10.872 7.866  42.034 11.637  -3.011 -0.114 CL20 Y4N 27 
Y4N N28  N4  N  0 1 N N N N N N -15.750 12.788 47.095 2.433   1.334  1.173  N28  Y4N 28 
Y4N C29  C19 C  0 1 N N N N N N -17.128 13.046 47.405 2.385   2.632  1.578  C29  Y4N 29 
Y4N N30  N5  N  0 1 N N N N N N -17.932 13.613 46.498 1.343   3.390  1.422  N30  Y4N 30 
Y4N N31  N6  N  0 1 N N N N N N -16.281 14.630 41.233 -3.240  1.445  -0.989 N31  Y4N 31 
Y4N C32  C20 C  0 1 N N N N N N -17.187 13.853 40.302 -4.274  2.481  -1.051 C32  Y4N 32 
Y4N C33  C21 C  0 1 N N N N N N -16.909 14.181 38.811 -5.457  1.971  -1.881 C33  Y4N 33 
Y4N C34  C22 C  0 1 N N N N N N -14.639 14.881 39.423 -4.893  -0.360 -1.094 C34  Y4N 34 
Y4N C35  C23 C  0 1 N N N N N N -14.796 14.504 40.911 -3.733  0.247  -0.296 C35  Y4N 35 
Y4N C36  C24 C  0 1 N N N N N N -14.931 12.103 48.106 3.652   0.551  1.390  C36  Y4N 36 
Y4N C37  C25 C  0 1 N N N N N N -14.538 10.667 47.602 4.561   0.695  0.197  C37  Y4N 37 
Y4N O38  O4  O  0 1 N N N N N N -15.294 10.033 46.864 4.224   1.385  -0.742 O38  Y4N 38 
Y4N O39  O5  O  0 1 N N N N N N -13.983 12.939 45.612 1.394   -0.400 0.205  O39  Y4N 39 
Y4N H49  H1  H  0 1 N N N N N N -12.762 6.407  43.626 9.135   -3.696 -1.292 H49  Y4N 40 
Y4N H50  H2  H  0 1 N N N N N N -11.257 10.531 46.137 8.939   1.006  0.164  H50  Y4N 41 
Y4N H52  H3  H  0 1 N N N N N N -13.729 8.178  47.776 6.894   1.249  -1.118 H52  Y4N 42 
Y4N H51  H4  H  0 1 N N N N N N -12.020 8.533  48.199 6.122   -0.164 -1.878 H51  Y4N 43 
Y4N H54  H5  H  0 1 N N N N N N -18.646 15.219 42.249 -2.894  3.888  -0.062 H54  Y4N 44 
Y4N H55  H6  H  0 1 N N N N N N -14.722 13.788 43.280 -1.021  0.077  -0.575 H55  Y4N 45 
Y4N H56  H7  H  0 1 N N N N N N -19.363 14.712 44.569 -0.888  4.771  1.008  H56  Y4N 46 
Y4N H41  H8  H  0 1 N N N N N N -11.177 11.580 32.799 -12.441 -3.754 1.934  H41  Y4N 47 
Y4N H40  H9  H  0 1 N N N N N N -11.066 12.909 33.742 -11.169 -4.408 1.052  H40  Y4N 48 
Y4N H43  H10 H  0 1 N N N N N N -13.003 13.923 35.107 -9.057  -2.349 1.330  H43  Y4N 49 
Y4N H42  H11 H  0 1 N N N N N N -14.642 13.192 35.039 -9.341  -2.969 -0.314 H42  Y4N 50 
Y4N H44  H12 H  0 1 N N N N N N -13.836 11.201 36.225 -9.662  -0.650 -1.132 H44  Y4N 51 
Y4N H45  H13 H  0 1 N N N N N N -12.163 11.855 36.229 -9.379  -0.031 0.512  H45  Y4N 52 
Y4N H46  H14 H  0 1 N N N N N N -13.063 12.343 38.374 -7.108  -1.027 0.496  H46  Y4N 53 
Y4N H47  H15 H  0 1 N N N N N N -13.108 13.885 37.454 -7.392  -1.646 -1.148 H47  Y4N 54 
Y4N H48  H16 H  0 1 N N N N N N -13.649 6.891  45.856 7.084   -2.381 -1.646 H48  Y4N 55 
Y4N H53  H17 H  0 1 N N N N N N -12.615 10.785 48.462 6.018   -0.493 0.925  H53  Y4N 56 
Y4N H57  H18 H  0 1 N N N N N N -17.518 12.781 48.377 3.259   3.052  2.054  H57  Y4N 57 
Y4N H59  H19 H  0 1 N N N N N N -17.025 12.777 40.465 -4.613  2.718  -0.043 H59  Y4N 58 
Y4N H58  H20 H  0 1 N N N N N N -18.233 14.105 40.532 -3.863  3.377  -1.517 H58  Y4N 59 
Y4N H60  H21 H  0 1 N N N N N N -17.180 15.225 38.593 -5.145  1.831  -2.916 H60  Y4N 60 
Y4N H61  H22 H  0 1 N N N N N N -17.486 13.509 38.159 -6.274  2.692  -1.837 H61  Y4N 61 
Y4N H63  H23 H  0 1 N N N N N N -13.584 14.784 39.128 -5.336  -1.180 -0.529 H63  Y4N 62 
Y4N H62  H24 H  0 1 N N N N N N -14.968 15.919 39.270 -4.525  -0.728 -2.051 H62  Y4N 63 
Y4N H64  H25 H  0 1 N N N N N N -14.211 15.190 41.541 -2.929  -0.484 -0.218 H64  Y4N 64 
Y4N H65  H26 H  0 1 N N N N N N -14.457 13.471 41.080 -4.077  0.519  0.701  H65  Y4N 65 
Y4N H67  H27 H  0 1 N N N N N N -14.017 12.687 48.290 4.163   0.914  2.283  H67  Y4N 66 
Y4N H66  H28 H  0 1 N N N N N N -15.505 12.016 49.041 3.390   -0.499 1.523  H66  Y4N 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y4N N1  S2   SING N N 1  
Y4N S2  C3   SING N N 2  
Y4N S2  O9   DOUB N N 3  
Y4N S2  O10  DOUB N N 4  
Y4N C3  C4   SING N N 5  
Y4N C4  C5   SING N N 6  
Y4N C5  C6   SING N N 7  
Y4N C6  N7   SING N N 8  
Y4N C6  O8   DOUB N N 9  
Y4N N7  C33  SING N N 10 
Y4N N7  C34  SING N N 11 
Y4N C11 C12  DOUB Y N 12 
Y4N C11 C16  SING Y N 13 
Y4N C11 C17  SING N N 14 
Y4N C12 C13  SING Y N 15 
Y4N C13 C14  DOUB Y N 16 
Y4N C14 C15  SING Y N 17 
Y4N C14 CL20 SING N N 18 
Y4N C15 C16  DOUB Y N 19 
Y4N C15 CL19 SING N N 20 
Y4N C17 N18  SING N N 21 
Y4N N18 C37  SING N N 22 
Y4N C21 C22  DOUB Y N 23 
Y4N C21 C24  SING Y N 24 
Y4N C22 C23  SING Y N 25 
Y4N C22 N31  SING N N 26 
Y4N C23 C26  DOUB Y N 27 
Y4N C24 C25  DOUB Y N 28 
Y4N C25 C26  SING Y N 29 
Y4N C25 N30  SING N N 30 
Y4N C26 C27  SING N N 31 
Y4N C27 N28  SING N N 32 
Y4N C27 O39  DOUB N N 33 
Y4N N28 C29  SING N N 34 
Y4N N28 C36  SING N N 35 
Y4N C29 N30  DOUB N N 36 
Y4N N31 C32  SING N N 37 
Y4N N31 C35  SING N N 38 
Y4N C32 C33  SING N N 39 
Y4N C34 C35  SING N N 40 
Y4N C36 C37  SING N N 41 
Y4N C37 O38  DOUB N N 42 
Y4N C13 H49  SING N N 43 
Y4N C16 H50  SING N N 44 
Y4N C17 H52  SING N N 45 
Y4N C17 H51  SING N N 46 
Y4N C21 H54  SING N N 47 
Y4N C23 H55  SING N N 48 
Y4N C24 H56  SING N N 49 
Y4N N1  H41  SING N N 50 
Y4N N1  H40  SING N N 51 
Y4N C3  H43  SING N N 52 
Y4N C3  H42  SING N N 53 
Y4N C4  H44  SING N N 54 
Y4N C4  H45  SING N N 55 
Y4N C5  H46  SING N N 56 
Y4N C5  H47  SING N N 57 
Y4N C12 H48  SING N N 58 
Y4N N18 H53  SING N N 59 
Y4N C29 H57  SING N N 60 
Y4N C32 H59  SING N N 61 
Y4N C32 H58  SING N N 62 
Y4N C33 H60  SING N N 63 
Y4N C33 H61  SING N N 64 
Y4N C34 H63  SING N N 65 
Y4N C34 H62  SING N N 66 
Y4N C35 H64  SING N N 67 
Y4N C35 H65  SING N N 68 
Y4N C36 H67  SING N N 69 
Y4N C36 H66  SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y4N SMILES           ACDLabs              12.01 "O=C(CCCS(N)(=O)=O)N1CCN(CC1)c1cc2C(=O)N(CC(=O)NCc3ccc(Cl)c(Cl)c3)C=Nc2cc1"                                                                                                                               
Y4N InChI            InChI                1.06  "InChI=1S/C25H28Cl2N6O5S/c26-20-5-3-17(12-21(20)27)14-29-23(34)15-33-16-30-22-6-4-18(13-19(22)25(33)36)31-7-9-32(10-8-31)24(35)2-1-11-39(28,37)38/h3-6,12-13,16H,1-2,7-11,14-15H2,(H,29,34)(H2,28,37,38)" 
Y4N InChIKey         InChI                1.06  PYOCFAOKLJFTGQ-UHFFFAOYSA-N                                                                                                                                                                               
Y4N SMILES_CANONICAL CACTVS               3.385 "N[S](=O)(=O)CCCC(=O)N1CCN(CC1)c2ccc3N=CN(CC(=O)NCc4ccc(Cl)c(Cl)c4)C(=O)c3c2"                                                                                                                             
Y4N SMILES           CACTVS               3.385 "N[S](=O)(=O)CCCC(=O)N1CCN(CC1)c2ccc3N=CN(CC(=O)NCc4ccc(Cl)c(Cl)c4)C(=O)c3c2"                                                                                                                             
Y4N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CNC(=O)CN2C=Nc3ccc(cc3C2=O)N4CCN(CC4)C(=O)CCCS(=O)(=O)N)Cl)Cl"                                                                                                                                 
Y4N SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1CNC(=O)CN2C=Nc3ccc(cc3C2=O)N4CCN(CC4)C(=O)CCCS(=O)(=O)N)Cl)Cl"                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y4N "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(3,4-dichlorophenyl)methyl]-2-{4-oxo-6-[4-(4-sulfamoylbutanoyl)piperazin-1-yl]quinazolin-3(4H)-yl}acetamide"           
Y4N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3,4-dichlorophenyl)methyl]-2-[4-oxidanylidene-6-[4-(4-sulfamoylbutanoyl)piperazin-1-yl]quinazolin-3-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y4N "Create component" 2023-06-11 RCSB 
Y4N "Initial release"  2024-12-18 RCSB 
# 
