data_Y2N
# 
_chem_comp.id                                    Y2N 
_chem_comp.name                                  "5-[2-(dimethylamino)ethoxy]-2-methyl-N-{(1R)-1-[(3P,5M)-3-(1-methyl-1H-pyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl}benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H31 N5 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-14 
_chem_comp.pdbx_modified_date                    2024-03-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        489.632 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y2N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8UUW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y2N C1   C1  C 0 1 N N N N N N 47.599 32.818 1.103  -3.039 5.056  0.197  C1   Y2N 1  
Y2N C2   C2  C 0 1 Y N N N N N 48.753 33.693 0.685  -3.511 3.625  0.168  C2   Y2N 2  
Y2N C3   C3  C 0 1 Y N N N N N 50.004 33.170 0.313  -2.630 2.606  -0.198 C3   Y2N 3  
Y2N C4   C4  C 0 1 N N N N N N 50.212 31.689 0.212  -1.232 2.928  -0.556 C4   Y2N 4  
Y2N C11  C5  C 0 1 Y N N N N N 51.638 27.745 -3.538 5.336  0.544  0.720  C11  Y2N 5  
Y2N C12  C6  C 0 1 Y N N N N N 52.104 27.663 -4.831 6.247  -0.395 1.107  C12  Y2N 6  
Y2N C14  C7  C 0 1 N N N N N N 51.169 26.822 -7.004 8.543  -0.368 2.110  C14  Y2N 7  
Y2N C16  C8  C 0 1 Y N N N N N 50.370 27.141 -3.607 5.895  1.811  0.979  C16  Y2N 8  
Y2N C10  C9  C 0 1 Y N N N N N 52.312 28.369 -2.377 4.001  0.280  0.126  C10  Y2N 9  
Y2N C17  C10 C 0 1 Y N N N N N 53.670 28.666 -2.435 3.577  -1.028 -0.080 C17  Y2N 10 
Y2N C18  C11 C 0 1 Y N N N N N 54.292 29.288 -1.357 2.322  -1.269 -0.637 C18  Y2N 11 
Y2N C19  C12 C 0 1 Y N N N N N 55.722 29.627 -1.420 1.864  -2.657 -0.860 C19  Y2N 12 
Y2N C20  C13 C 0 1 Y N N N N N 56.706 29.108 -2.207 2.557  -3.780 -0.572 C20  Y2N 13 
Y2N C22  C14 C 0 1 Y N N N N N 57.937 30.554 -1.127 0.747  -4.788 -1.383 C22  Y2N 14 
Y2N C24  C15 C 0 1 Y N N N N N 53.548 29.604 -0.224 1.499  -0.196 -0.983 C24  Y2N 15 
Y2N C26  C16 C 0 1 Y N N N N N 51.050 34.032 -0.028 -3.072 1.283  -0.223 C26  Y2N 16 
Y2N C27  C17 C 0 1 Y N N N N N 50.860 35.405 -0.012 -4.383 0.990  0.114  C27  Y2N 17 
Y2N C29  C18 C 0 1 N N N N N N 51.699 37.632 -0.396 -6.182 -0.528 0.450  C29  Y2N 18 
Y2N C30  C19 C 0 1 N N N N N N 52.634 38.192 -1.436 -6.486 -2.025 0.364  C30  Y2N 19 
Y2N C32  C20 C 0 1 N N N N N N 54.861 37.565 -0.572 -6.283 -2.585 2.711  C32  Y2N 20 
Y2N C33  C21 C 0 1 N N N N N N 53.723 39.535 0.330  -5.560 -4.163 1.023  C33  Y2N 21 
Y2N C34  C22 C 0 1 Y N N N N N 49.633 35.931 0.350  -5.252 2.010  0.476  C34  Y2N 22 
Y2N C35  C23 C 0 1 Y N N N N N 48.600 35.078 0.690  -4.813 3.320  0.507  C35  Y2N 23 
Y2N C6   C24 C 0 1 N N R N N N 51.374 29.702 1.070  1.033  2.254  -1.150 C6   Y2N 24 
Y2N C7   C25 C 0 1 N N N N N N 52.077 29.336 2.373  1.129  2.504  -2.657 C7   Y2N 25 
Y2N C8   C26 C 0 1 Y N N N N N 52.190 29.313 -0.150 1.926  1.100  -0.775 C8   Y2N 26 
Y2N C9   C27 C 0 1 Y N N N N N 51.584 28.690 -1.235 3.167  1.343  -0.219 C9   Y2N 27 
Y2N N13  N1  N 0 1 Y N N N N N 51.162 27.061 -5.568 7.325  0.256  1.586  N13  Y2N 28 
Y2N N15  N2  N 0 1 Y N N N N N 50.077 26.726 -4.829 7.082  1.632  1.496  N15  Y2N 29 
Y2N N21  N3  N 0 1 Y N N N N N 57.965 29.635 -2.041 1.926  -4.894 -0.866 N21  Y2N 30 
Y2N N31  N4  N 0 1 N N N N N N 53.929 38.685 -0.874 -5.696 -2.743 1.374  N31  Y2N 31 
Y2N N5   N5  N 0 1 N N N N N N 51.077 31.138 1.075  -0.352 1.936  -0.795 N5   Y2N 32 
Y2N O25  O1  O 0 1 N N N N N N 49.612 31.026 -0.628 -0.876 4.088  -0.635 O25  Y2N 33 
Y2N O28  O2  O 0 1 N N N N N N 51.906 36.210 -0.388 -4.818 -0.297 0.090  O28  Y2N 34 
Y2N S23  S1  S 0 1 Y N N N N N 56.398 30.841 -0.414 0.314  -3.142 -1.542 S23  Y2N 35 
Y2N H1B  H1  H 0 1 N N N N N N 47.642 32.648 2.189  -3.097 5.478  -0.806 H1B  Y2N 36 
Y2N H1A  H2  H 0 1 N N N N N N 46.651 33.314 0.847  -3.671 5.633  0.872  H1A  Y2N 37 
Y2N H1C  H3  H 0 1 N N N N N N 47.662 31.853 0.578  -2.007 5.091  0.547  H1C  Y2N 38 
Y2N H12  H4  H 0 1 N N N N N N 53.059 28.020 -5.187 6.125  -1.466 1.041  H12  Y2N 39 
Y2N H14C H5  H 0 0 N N N N N N 50.214 26.367 -7.305 9.256  -0.512 1.299  H14C Y2N 40 
Y2N H14B H6  H 0 0 N N N N N N 51.303 27.777 -7.534 8.983  0.276  2.871  H14B Y2N 41 
Y2N H14A H7  H 0 0 N N N N N N 51.995 26.142 -7.258 8.295  -1.334 2.551  H14A Y2N 42 
Y2N H16  H8  H 0 1 N N N N N N 49.710 27.029 -2.759 5.426  2.763  0.784  H16  Y2N 43 
Y2N H17  H9  H 0 1 N N N N N N 54.241 28.414 -3.316 4.219  -1.854 0.189  H17  Y2N 44 
Y2N H20  H10 H 0 1 N N N N N N 56.507 28.324 -2.923 3.546  -3.763 -0.136 H20  Y2N 45 
Y2N H22  H11 H 0 1 N N N N N N 58.820 31.102 -0.833 0.122  -5.621 -1.670 H22  Y2N 46 
Y2N H24  H12 H 0 1 N N N N N N 54.034 30.084 0.613  0.526  -0.380 -1.415 H24  Y2N 47 
Y2N H26  H13 H 0 1 N N N N N N 52.012 33.626 -0.305 -2.395 0.491  -0.505 H26  Y2N 48 
Y2N H29B H14 H 0 0 N N N N N N 50.656 37.863 -0.658 -6.834 0.015  -0.234 H29B Y2N 49 
Y2N H29A H15 H 0 0 N N N N N N 51.931 38.056 0.592  -6.353 -0.180 1.468  H29A Y2N 50 
Y2N H30B H16 H 0 0 N N N N N N 52.852 37.402 -2.169 -7.547 -2.191 0.548  H30B Y2N 51 
Y2N H30A H17 H 0 0 N N N N N N 52.132 39.031 -1.939 -6.226 -2.392 -0.628 H30A Y2N 52 
Y2N H32B H18 H 0 0 N N N N N N 55.799 37.968 -0.162 -7.297 -2.984 2.712  H32B Y2N 53 
Y2N H32A H19 H 0 0 N N N N N N 54.398 36.892 0.165  -5.679 -3.127 3.439  H32A Y2N 54 
Y2N H32C H20 H 0 0 N N N N N N 55.075 37.007 -1.495 -6.308 -1.528 2.975  H32C Y2N 55 
Y2N H33B H21 H 0 0 N N N N N N 54.697 39.875 0.710  -4.990 -4.256 0.098  H33B Y2N 56 
Y2N H33C H22 H 0 0 N N N N N N 53.109 40.407 0.062  -5.039 -4.687 1.825  H33C Y2N 57 
Y2N H33A H23 H 0 0 N N N N N N 53.210 38.951 1.108  -6.549 -4.600 0.886  H33A Y2N 58 
Y2N H34  H24 H 0 1 N N N N N N 49.483 37.000 0.367  -6.274 1.778  0.739  H34  Y2N 59 
Y2N H35  H25 H 0 1 N N N N N N 47.645 35.498 0.968  -5.495 4.109  0.790  H35  Y2N 60 
Y2N H6   H26 H 0 1 N N N N N N 50.424 29.148 1.033  1.349  3.148  -0.613 H6   Y2N 61 
Y2N H7C  H27 H 0 1 N N N N N N 52.304 28.260 2.378  0.483  3.339  -2.928 H7C  Y2N 62 
Y2N H7B  H28 H 0 1 N N N N N N 53.013 29.908 2.458  2.160  2.741  -2.921 H7B  Y2N 63 
Y2N H7A  H29 H 0 1 N N N N N N 51.422 29.576 3.223  0.813  1.610  -3.194 H7A  Y2N 64 
Y2N H9   H30 H 0 1 N N N N N N 50.532 28.451 -1.191 3.496  2.359  -0.058 H9   Y2N 65 
Y2N H5   H32 H 0 1 N N N N N N 51.534 31.725 1.743  -0.636 1.010  -0.733 H5   Y2N 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y2N C1  C2   SING N N 1  
Y2N C2  C3   DOUB Y N 2  
Y2N C3  C4   SING N N 3  
Y2N C4  N5   SING N N 4  
Y2N N5  C6   SING N N 5  
Y2N C6  C7   SING N N 6  
Y2N C6  C8   SING N N 7  
Y2N C8  C9   DOUB Y N 8  
Y2N C9  C10  SING Y N 9  
Y2N C10 C11  SING N N 10 
Y2N C11 C12  DOUB Y N 11 
Y2N C12 N13  SING Y N 12 
Y2N N13 C14  SING N N 13 
Y2N N13 N15  SING Y N 14 
Y2N N15 C16  DOUB Y N 15 
Y2N C10 C17  DOUB Y N 16 
Y2N C17 C18  SING Y N 17 
Y2N C18 C19  SING N N 18 
Y2N C19 C20  DOUB Y N 19 
Y2N C20 N21  SING Y N 20 
Y2N N21 C22  DOUB Y N 21 
Y2N C22 S23  SING Y N 22 
Y2N C18 C24  DOUB Y N 23 
Y2N C4  O25  DOUB N N 24 
Y2N C3  C26  SING Y N 25 
Y2N C26 C27  DOUB Y N 26 
Y2N C27 O28  SING N N 27 
Y2N O28 C29  SING N N 28 
Y2N C29 C30  SING N N 29 
Y2N C30 N31  SING N N 30 
Y2N N31 C32  SING N N 31 
Y2N N31 C33  SING N N 32 
Y2N C27 C34  SING Y N 33 
Y2N C34 C35  DOUB Y N 34 
Y2N C35 C2   SING Y N 35 
Y2N C24 C8   SING Y N 36 
Y2N C16 C11  SING Y N 37 
Y2N S23 C19  SING Y N 38 
Y2N C1  H1B  SING N N 39 
Y2N C1  H1A  SING N N 40 
Y2N C1  H1C  SING N N 41 
Y2N C12 H12  SING N N 42 
Y2N C14 H14C SING N N 43 
Y2N C14 H14B SING N N 44 
Y2N C14 H14A SING N N 45 
Y2N C16 H16  SING N N 46 
Y2N C17 H17  SING N N 47 
Y2N C20 H20  SING N N 48 
Y2N C22 H22  SING N N 49 
Y2N C24 H24  SING N N 50 
Y2N C26 H26  SING N N 51 
Y2N C29 H29B SING N N 52 
Y2N C29 H29A SING N N 53 
Y2N C30 H30B SING N N 54 
Y2N C30 H30A SING N N 55 
Y2N C32 H32B SING N N 56 
Y2N C32 H32A SING N N 57 
Y2N C32 H32C SING N N 58 
Y2N C33 H33B SING N N 59 
Y2N C33 H33C SING N N 60 
Y2N C33 H33A SING N N 61 
Y2N C34 H34  SING N N 62 
Y2N C35 H35  SING N N 63 
Y2N C6  H6   SING N N 64 
Y2N C7  H7C  SING N N 65 
Y2N C7  H7B  SING N N 66 
Y2N C7  H7A  SING N N 67 
Y2N C9  H9   SING N N 68 
Y2N N5  H5   SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y2N SMILES           ACDLabs              12.01 "CN(C)CCOc1cc(c(C)cc1)C(=O)NC(C)c1cc(cc(c1)c1cncs1)c1cn(C)nc1"                                                                                                           
Y2N InChI            InChI                1.06  "InChI=1S/C27H31N5O2S/c1-18-6-7-24(34-9-8-31(3)4)13-25(18)27(33)30-19(2)20-10-21(23-14-29-32(5)16-23)12-22(11-20)26-15-28-17-35-26/h6-7,10-17,19H,8-9H2,1-5H3,(H,30,33)" 
Y2N InChIKey         InChI                1.06  HGOCITQKFLPHLS-UHFFFAOYSA-N                                                                                                                                              
Y2N SMILES_CANONICAL CACTVS               3.385 "C[C@@H](NC(=O)c1cc(OCCN(C)C)ccc1C)c2cc(cc(c2)c3cnn(C)c3)c4scnc4"                                                                                                        
Y2N SMILES           CACTVS               3.385 "C[CH](NC(=O)c1cc(OCCN(C)C)ccc1C)c2cc(cc(c2)c3cnn(C)c3)c4scnc4"                                                                                                          
Y2N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)N[C@H](C)c2cc(cc(c2)c3cncs3)c4cnn(c4)C)OCCN(C)C"                                                                                                         
Y2N SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)NC(C)c2cc(cc(c2)c3cncs3)c4cnn(c4)C)OCCN(C)C"                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y2N "SYSTEMATIC NAME" ACDLabs              12.01 "5-[2-(dimethylamino)ethoxy]-2-methyl-N-{(1R)-1-[(3P,5M)-3-(1-methyl-1H-pyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl}benzamide" 
Y2N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[2-(dimethylamino)ethoxy]-2-methyl-~{N}-[(1~{R})-1-[3-(1-methylpyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl]benzamide"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y2N "Create component" 2023-11-14 RCSB 
Y2N "Initial release"  2024-04-03 RCSB 
# 
