data_Y0N
# 
_chem_comp.id                                    Y0N 
_chem_comp.name                                  "2-[6-(4-acetylpiperazin-1-yl)-2,4-dioxo-1,4-dihydroquinazolin-3(2H)-yl]-N-[(3,4-dichlorophenyl)methyl]acetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H23 Cl2 N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-09 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        504.366 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y0N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G72 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y0N C10  C1  C  0 1 Y N N N N N -12.918 7.211  45.961 -6.572 -1.155 -0.561 C10  Y0N 1  
Y0N C15  C2  C  0 1 N N N N N N -14.770 12.987 46.664 1.005  -0.652 0.607  C15  Y0N 2  
Y0N C16  C3  C  0 1 Y N N N N N -15.674 13.637 45.709 2.374  -1.038 0.219  C16  Y0N 3  
Y0N C17  C4  C  0 1 Y N N N N N -17.006 13.957 46.111 2.659  -2.404 0.056  C17  Y0N 4  
Y0N C18  C5  C  0 1 Y N N N N N -17.902 14.505 45.168 3.936  -2.803 -0.309 C18  Y0N 5  
Y0N C19  C6  C  0 1 Y N N N N N -17.491 14.689 43.885 4.920  -1.857 -0.510 C19  Y0N 6  
Y0N C20  C7  C  0 1 Y N N N N N -16.184 14.354 43.463 4.642  -0.502 -0.349 C20  Y0N 7  
Y0N C21  C8  C  0 1 Y N N N N N -15.252 13.845 44.371 3.372  -0.087 0.015  C21  Y0N 8  
Y0N C23  C9  C  0 1 N N N N N N -16.835 13.688 41.217 6.914  -0.204 -0.933 C23  Y0N 9  
Y0N C24  C10 C  0 1 N N N N N N -16.568 13.956 39.736 7.938  0.866  -1.326 C24  Y0N 10 
Y0N C26  C11 C  0 1 N N N N N N -14.282 14.688 40.190 6.803  2.431  0.298  C26  Y0N 11 
Y0N C27  C12 C  0 1 N N N N N N -14.384 14.350 41.703 5.824  1.299  0.627  C27  Y0N 12 
Y0N C28  C13 C  0 1 N N N N N N -14.746 12.791 38.485 9.242  2.177  0.285  C28  Y0N 13 
Y0N C1   C14 C  0 1 N N N N N N -14.542 11.754 48.910 -1.275 -1.272 1.179  C1   Y0N 14 
Y0N C2   C15 C  0 1 N N N N N N -14.380 10.324 48.345 -2.109 -1.068 -0.059 C2   Y0N 15 
Y0N N3   N1  N  0 1 N N N N N N -13.203 9.712  48.641 -3.409 -0.731 0.053  N3   Y0N 16 
Y0N C4   C16 C  0 1 N N N N N N -12.943 8.349  48.176 -4.220 -0.533 -1.151 C4   Y0N 17 
Y0N C5   C17 C  0 1 Y N N N N N -12.472 8.286  46.769 -5.627 -0.164 -0.754 C5   Y0N 18 
Y0N C6   C18 C  0 1 Y N N N N N -11.510 9.219  46.313 -5.971 1.163  -0.583 C6   Y0N 19 
Y0N C7   C19 C  0 1 Y N N N N N -10.951 9.007  45.038 -7.262 1.501  -0.219 C7   Y0N 20 
Y0N C8   C20 C  0 1 Y N N N N N -11.396 7.912  44.246 -8.209 0.509  -0.026 C8   Y0N 21 
Y0N C9   C21 C  0 1 Y N N N N N -12.388 7.026  44.697 -7.864 -0.819 -0.203 C9   Y0N 22 
Y0N CL11 CL1 CL 0 0 N N N N N N -10.654 7.603  42.727 -9.829 0.932  0.431  CL11 Y0N 23 
Y0N CL12 CL2 CL 0 0 N N N N N N -9.633  10.019 44.513 -7.696 3.168  -0.004 CL12 Y0N 24 
Y0N O13  O1  O  0 1 N N N N N N -15.201 9.751  47.655 -1.611 -1.208 -1.156 O13  Y0N 25 
Y0N N14  N2  N  0 1 N N N N N N -15.312 12.627 47.957 0.093  -1.630 0.793  N14  Y0N 26 
Y0N N22  N3  N  0 1 N N N N N N -15.856 14.467 42.076 5.651  0.446  -0.557 N22  Y0N 27 
Y0N N25  N4  N  0 1 N N N N N N -15.154 13.735 39.473 8.042  1.838  -0.227 N25  Y0N 28 
Y0N C29  C22 C  0 1 N N N N N N -13.268 12.616 38.208 10.506 1.652  -0.346 C29  Y0N 29 
Y0N O30  O2  O  0 1 N N N N N N -15.599 12.122 37.885 9.305  2.904  1.254  O30  Y0N 30 
Y0N N31  N5  N  0 1 N N N N N N -17.469 13.650 47.440 1.642  -3.328 0.267  N31  Y0N 31 
Y0N C32  C23 C  0 1 N N N N N N -16.651 12.981 48.368 0.414  -2.923 0.630  C32  Y0N 32 
Y0N O33  O3  O  0 1 N N N N N N -17.095 12.754 49.488 -0.447 -3.763 0.810  O33  Y0N 33 
Y0N O34  O4  O  0 1 N N N N N N -13.592 12.808 46.420 0.707  0.517  0.762  O34  Y0N 34 
Y0N H42  H1  H  0 1 N N N N N N -13.673 6.535  46.333 -6.302 -2.192 -0.695 H42  Y0N 35 
Y0N H43  H2  H  0 1 N N N N N N -18.905 14.776 45.463 4.160  -3.852 -0.435 H43  Y0N 36 
Y0N H44  H3  H  0 1 N N N N N N -18.183 15.103 43.167 5.914  -2.170 -0.793 H44  Y0N 37 
Y0N H45  H4  H  0 1 N N N N N N -14.242 13.617 44.064 3.156  0.964  0.139  H45  Y0N 38 
Y0N H47  H5  H  0 1 N N N N N N -16.719 12.613 41.418 6.742  -0.870 -1.779 H47  Y0N 39 
Y0N H46  H6  H  0 1 N N N N N N -17.861 13.999 41.463 7.294  -0.779 -0.089 H46  Y0N 40 
Y0N H49  H7  H  0 1 N N N N N N -17.171 13.272 39.121 8.908  0.400  -1.496 H49  Y0N 41 
Y0N H48  H8  H  0 1 N N N N N N -16.832 14.996 39.494 7.608  1.373  -2.233 H48  Y0N 42 
Y0N H51  H9  H  0 1 N N N N N N -13.242 14.579 39.848 6.364  3.088  -0.453 H51  Y0N 43 
Y0N H50  H10 H  0 1 N N N N N N -14.621 15.719 40.010 7.020  3.001  1.201  H50  Y0N 44 
Y0N H52  H11 H  0 1 N N N N N N -13.785 15.061 42.292 6.219  0.704  1.450  H52  Y0N 45 
Y0N H53  H12 H  0 1 N N N N N N -14.026 13.327 41.888 4.861  1.722  0.913  H53  Y0N 46 
Y0N H35  H13 H  0 1 N N N N N N -15.082 11.703 49.867 -1.258 -0.351 1.762  H35  Y0N 47 
Y0N H36  H14 H  0 1 N N N N N N -13.546 12.191 49.073 -1.704 -2.074 1.779  H36  Y0N 48 
Y0N H37  H15 H  0 1 N N N N N N -12.512 10.195 49.179 -3.808 -0.619 0.930  H37  Y0N 49 
Y0N H38  H16 H  0 1 N N N N N N -12.173 7.901  48.822 -3.791 0.270  -1.751 H38  Y0N 50 
Y0N H39  H17 H  0 1 N N N N N N -13.874 7.769  48.258 -4.237 -1.453 -1.734 H39  Y0N 51 
Y0N H40  H18 H  0 1 N N N N N N -11.216 10.062 46.920 -5.233 1.936  -0.734 H40  Y0N 52 
Y0N H41  H19 H  0 1 N N N N N N -12.730 6.216  44.069 -8.601 -1.593 -0.052 H41  Y0N 53 
Y0N H56  H20 H  0 1 N N N N N N -13.128 11.844 37.437 10.825 0.749  0.176  H56  Y0N 54 
Y0N H54  H21 H  0 1 N N N N N N -12.846 13.568 37.855 10.319 1.419  -1.394 H54  Y0N 55 
Y0N H55  H22 H  0 1 N N N N N N -12.756 12.308 39.132 11.288 2.408  -0.275 H55  Y0N 56 
Y0N H57  H23 H  0 1 N N N N N N -18.394 13.919 47.709 1.824  -4.275 0.158  H57  Y0N 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y0N C1  C2   SING N N 1  
Y0N C1  N14  SING N N 2  
Y0N C2  N3   SING N N 3  
Y0N C2  O13  DOUB N N 4  
Y0N N3  C4   SING N N 5  
Y0N C4  C5   SING N N 6  
Y0N C5  C6   DOUB Y N 7  
Y0N C5  C10  SING Y N 8  
Y0N C6  C7   SING Y N 9  
Y0N C7  C8   DOUB Y N 10 
Y0N C7  CL12 SING N N 11 
Y0N C8  C9   SING Y N 12 
Y0N C8  CL11 SING N N 13 
Y0N C9  C10  DOUB Y N 14 
Y0N N14 C15  SING N N 15 
Y0N N14 C32  SING N N 16 
Y0N C15 C16  SING N N 17 
Y0N C15 O34  DOUB N N 18 
Y0N C16 C17  DOUB Y N 19 
Y0N C16 C21  SING Y N 20 
Y0N C17 C18  SING Y N 21 
Y0N C17 N31  SING N N 22 
Y0N C18 C19  DOUB Y N 23 
Y0N C19 C20  SING Y N 24 
Y0N C20 C21  DOUB Y N 25 
Y0N C20 N22  SING N N 26 
Y0N N22 C23  SING N N 27 
Y0N N22 C27  SING N N 28 
Y0N C23 C24  SING N N 29 
Y0N C24 N25  SING N N 30 
Y0N N25 C26  SING N N 31 
Y0N N25 C28  SING N N 32 
Y0N C26 C27  SING N N 33 
Y0N C28 C29  SING N N 34 
Y0N C28 O30  DOUB N N 35 
Y0N N31 C32  SING N N 36 
Y0N C32 O33  DOUB N N 37 
Y0N C10 H42  SING N N 38 
Y0N C18 H43  SING N N 39 
Y0N C19 H44  SING N N 40 
Y0N C21 H45  SING N N 41 
Y0N C23 H47  SING N N 42 
Y0N C23 H46  SING N N 43 
Y0N C24 H49  SING N N 44 
Y0N C24 H48  SING N N 45 
Y0N C26 H51  SING N N 46 
Y0N C26 H50  SING N N 47 
Y0N C27 H52  SING N N 48 
Y0N C27 H53  SING N N 49 
Y0N C1  H35  SING N N 50 
Y0N C1  H36  SING N N 51 
Y0N N3  H37  SING N N 52 
Y0N C4  H38  SING N N 53 
Y0N C4  H39  SING N N 54 
Y0N C6  H40  SING N N 55 
Y0N C9  H41  SING N N 56 
Y0N C29 H56  SING N N 57 
Y0N C29 H54  SING N N 58 
Y0N C29 H55  SING N N 59 
Y0N N31 H57  SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y0N SMILES           ACDLabs              12.01 "O=C(C)N1CCN(CC1)c1cc2C(=O)N(CC(=O)NCc3ccc(Cl)c(Cl)c3)C(=O)Nc2cc1"                                                                                                                
Y0N InChI            InChI                1.06  "InChI=1S/C23H23Cl2N5O4/c1-14(31)28-6-8-29(9-7-28)16-3-5-20-17(11-16)22(33)30(23(34)27-20)13-21(32)26-12-15-2-4-18(24)19(25)10-15/h2-5,10-11H,6-9,12-13H2,1H3,(H,26,32)(H,27,34)" 
Y0N InChIKey         InChI                1.06  MLEBKOFCEIQPJZ-UHFFFAOYSA-N                                                                                                                                                       
Y0N SMILES_CANONICAL CACTVS               3.385 "CC(=O)N1CCN(CC1)c2ccc3NC(=O)N(CC(=O)NCc4ccc(Cl)c(Cl)c4)C(=O)c3c2"                                                                                                                
Y0N SMILES           CACTVS               3.385 "CC(=O)N1CCN(CC1)c2ccc3NC(=O)N(CC(=O)NCc4ccc(Cl)c(Cl)c4)C(=O)c3c2"                                                                                                                
Y0N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)c2ccc3c(c2)C(=O)N(C(=O)N3)CC(=O)NCc4ccc(c(c4)Cl)Cl"                                                                                                              
Y0N SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)c2ccc3c(c2)C(=O)N(C(=O)N3)CC(=O)NCc4ccc(c(c4)Cl)Cl"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y0N "SYSTEMATIC NAME" ACDLabs              12.01 "2-[6-(4-acetylpiperazin-1-yl)-2,4-dioxo-1,4-dihydroquinazolin-3(2H)-yl]-N-[(3,4-dichlorophenyl)methyl]acetamide"           
Y0N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3,4-dichlorophenyl)methyl]-2-[6-(4-ethanoylpiperazin-1-yl)-2,4-bis(oxidanylidene)-1~{H}-quinazolin-3-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y0N "Create component" 2023-06-09 RCSB 
Y0N "Initial release"  2024-12-18 RCSB 
# 
