data_X5N
# 
_chem_comp.id                                    X5N 
_chem_comp.name                                  "(6P)-6-[(4R)-imidazo[1,2-a]pyridin-3-yl]-4-(piperidin-4-yl)-2H-pyrido[3,2-b][1,4]oxazin-3(4H)-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H19 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-10-23 
_chem_comp.pdbx_modified_date                    2024-10-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        349.386 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X5N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8UOK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X5N C17 C1  C 0 1 N N N N N N 7.642  56.765 17.551 3.308  1.352  -1.209 C17 X5N 1  
X5N C13 C2  C 0 1 N N N N N N 7.978  54.693 19.025 3.646  1.002  1.238  C13 X5N 2  
X5N C14 C3  C 0 1 N N N N N N 9.156  54.316 18.112 4.046  2.474  1.358  C14 X5N 3  
X5N C12 C4  C 0 1 N N N N N N 7.622  56.192 18.983 2.660  0.837  0.079  C12 X5N 4  
X5N C02 C5  C 0 1 N N N N N N 5.212  55.988 19.578 3.281  -1.489 -0.337 C02 X5N 5  
X5N C03 C6  C 0 1 N N N N N N 4.209  56.057 20.723 2.911  -2.938 -0.531 C03 X5N 6  
X5N C05 C7  C 0 1 Y N N N N N 5.949  56.737 22.177 0.731  -2.365 0.217  C05 X5N 7  
X5N C06 C8  C 0 1 Y N N N N N 6.332  57.215 23.402 -0.580 -2.800 0.339  C06 X5N 8  
X5N C07 C9  C 0 1 Y N N N N N 7.475  58.000 23.521 -1.595 -1.859 0.282  C07 X5N 9  
X5N C08 C10 C 0 1 Y N N N N N 8.197  58.295 22.375 -1.268 -0.514 0.105  C08 X5N 10 
X5N C10 C11 C 0 1 Y N N N N N 6.744  57.044 21.072 0.993  -1.005 0.042  C10 X5N 11 
X5N C16 C12 C 0 1 N N N N N N 8.832  56.317 16.688 3.717  2.815  -1.019 C16 X5N 12 
X5N C18 C13 C 0 1 Y N N N N N 9.446  59.030 22.365 -2.342 0.496  0.043  C18 X5N 13 
X5N C19 C14 C 0 1 Y N N N N N 10.146 59.438 23.464 -2.184 1.853  0.023  C19 X5N 14 
X5N C21 C15 C 0 1 Y N N N N N 11.404 59.933 21.788 -4.319 1.471  -0.054 C21 X5N 15 
X5N C22 C16 C 0 1 Y N N N N N 12.412 60.380 20.892 -5.725 1.532  -0.111 C22 X5N 16 
X5N C23 C17 C 0 1 Y N N N N N 12.259 60.189 19.567 -6.443 0.375  -0.118 C23 X5N 17 
X5N C24 C18 C 0 1 Y N N N N N 11.084 59.548 19.059 -5.774 -0.858 -0.068 C24 X5N 18 
X5N C25 C19 C 0 1 Y N N N N N 10.127 59.130 19.908 -4.425 -0.900 -0.021 C25 X5N 19 
X5N N09 N1  N 0 1 Y N N N N N 7.823  57.775 21.199 0.002  -0.132 -0.008 N09 X5N 20 
X5N N11 N2  N 0 1 N N N N N N 6.421  56.568 19.793 2.319  -0.579 -0.077 N11 X5N 21 
X5N N15 N3  N 0 1 N N N N N N 8.959  54.854 16.753 4.662  2.919  0.101  N15 X5N 22 
X5N N20 N4  N 0 1 Y N N N N N 11.331 60.017 23.102 -3.387 2.417  -0.035 N20 X5N 23 
X5N N26 N5  N 0 1 Y N N N N N 10.265 59.323 21.267 -3.696 0.252  -0.012 N26 X5N 24 
X5N O01 O1  O 0 1 N N N N N N 4.899  55.415 18.553 4.441  -1.143 -0.410 O01 X5N 25 
X5N O04 O2  O 0 1 N N N N N N 4.822  55.962 22.026 1.763  -3.249 0.264  O04 X5N 26 
X5N H1  H1  H 0 1 N N N N N N 7.667  57.862 17.623 4.190  0.754  -1.437 H1  X5N 27 
X5N H2  H2  H 0 1 N N N N N N 6.717  56.452 17.045 2.596  1.277  -2.030 H2  X5N 28 
X5N H3  H3  H 0 1 N N N N N N 7.095  54.117 18.710 4.534  0.398  1.049  H3  X5N 29 
X5N H4  H4  H 0 1 N N N N N N 8.240  54.426 20.059 3.176  0.676  2.166  H4  X5N 30 
X5N H5  H5  H 0 1 N N N N N N 9.234  53.220 18.058 3.160  3.076  1.560  H5  X5N 31 
X5N H6  H6  H 0 1 N N N N N N 10.085 54.729 18.532 4.759  2.592  2.173  H6  X5N 32 
X5N H7  H7  H 0 1 N N N N N N 8.466  56.687 19.486 1.756  1.410  0.286  H7  X5N 33 
X5N H8  H8  H 0 1 N N N N N N 3.672  57.015 20.659 2.684  -3.117 -1.582 H8  X5N 34 
X5N H9  H9  H 0 1 N N N N N N 3.495  55.228 20.612 3.746  -3.569 -0.226 H9  X5N 35 
X5N H10 H10 H 0 1 N N N N N N 5.745  56.982 24.278 -0.804 -3.848 0.475  H10 X5N 36 
X5N H11 H11 H 0 1 N N N N N N 7.792  58.371 24.484 -2.627 -2.163 0.373  H11 X5N 37 
X5N H12 H12 H 0 1 N N N N N N 9.755  56.783 17.065 4.192  3.180  -1.929 H12 X5N 38 
X5N H13 H13 H 0 1 N N N N N N 8.666  56.625 15.645 2.833  3.415  -0.805 H13 X5N 39 
X5N H14 H14 H 0 1 N N N N N N 9.809  59.319 24.483 -1.241 2.379  0.051  H14 X5N 40 
X5N H15 H15 H 0 1 N N N N N N 13.296 60.870 21.271 -6.228 2.486  -0.149 H15 X5N 41 
X5N H16 H16 H 0 1 N N N N N N 13.027 60.521 18.884 -7.522 0.407  -0.161 H16 X5N 42 
X5N H17 H17 H 0 1 N N N N N N 10.966 59.400 17.996 -6.341 -1.778 -0.073 H17 X5N 43 
X5N H18 H18 H 0 1 N N N N N N 9.245  58.640 19.523 -3.920 -1.854 0.018  H18 X5N 44 
X5N H19 H19 H 0 1 N N N N N N 8.125  54.451 16.376 5.507  2.402  -0.090 H19 X5N 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X5N C16 N15 SING N N 1  
X5N C16 C17 SING N N 2  
X5N N15 C14 SING N N 3  
X5N C17 C12 SING N N 4  
X5N C14 C13 SING N N 5  
X5N O01 C02 DOUB N N 6  
X5N C12 C13 SING N N 7  
X5N C12 N11 SING N N 8  
X5N C24 C23 SING Y N 9  
X5N C24 C25 DOUB Y N 10 
X5N C23 C22 DOUB Y N 11 
X5N C02 N11 SING N N 12 
X5N C02 C03 SING N N 13 
X5N N11 C10 SING N N 14 
X5N C25 N26 SING Y N 15 
X5N C03 O04 SING N N 16 
X5N C22 C21 SING Y N 17 
X5N C10 N09 DOUB Y N 18 
X5N C10 C05 SING Y N 19 
X5N N09 C08 SING Y N 20 
X5N N26 C21 SING Y N 21 
X5N N26 C18 SING Y N 22 
X5N C21 N20 DOUB Y N 23 
X5N O04 C05 SING N N 24 
X5N C05 C06 DOUB Y N 25 
X5N C18 C08 SING N N 26 
X5N C18 C19 DOUB Y N 27 
X5N C08 C07 DOUB Y N 28 
X5N N20 C19 SING Y N 29 
X5N C06 C07 SING Y N 30 
X5N C17 H1  SING N N 31 
X5N C17 H2  SING N N 32 
X5N C13 H3  SING N N 33 
X5N C13 H4  SING N N 34 
X5N C14 H5  SING N N 35 
X5N C14 H6  SING N N 36 
X5N C12 H7  SING N N 37 
X5N C03 H8  SING N N 38 
X5N C03 H9  SING N N 39 
X5N C06 H10 SING N N 40 
X5N C07 H11 SING N N 41 
X5N C16 H12 SING N N 42 
X5N C16 H13 SING N N 43 
X5N C19 H14 SING N N 44 
X5N C22 H15 SING N N 45 
X5N C23 H16 SING N N 46 
X5N C24 H17 SING N N 47 
X5N C25 H18 SING N N 48 
X5N N15 H19 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X5N SMILES           ACDLabs              12.01 "O=C1COc2ccc(nc2N1C1CCNCC1)c1cnc2ccccn21"                                                                                             
X5N InChI            InChI                1.06  "InChI=1S/C19H19N5O2/c25-18-12-26-16-5-4-14(15-11-21-17-3-1-2-10-23(15)17)22-19(16)24(18)13-6-8-20-9-7-13/h1-5,10-11,13,20H,6-9,12H2" 
X5N InChIKey         InChI                1.06  SQOLXUGRJNPDOA-UHFFFAOYSA-N                                                                                                           
X5N SMILES_CANONICAL CACTVS               3.385 "O=C1COc2ccc(nc2N1C3CCNCC3)c4cnc5ccccn45"                                                                                             
X5N SMILES           CACTVS               3.385 "O=C1COc2ccc(nc2N1C3CCNCC3)c4cnc5ccccn45"                                                                                             
X5N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccn2c(c1)ncc2c3ccc4c(n3)N(C(=O)CO4)C5CCNCC5"                                                                                       
X5N SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccn2c(c1)ncc2c3ccc4c(n3)N(C(=O)CO4)C5CCNCC5"                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X5N "SYSTEMATIC NAME" ACDLabs              12.01 "(6P)-6-[(4R)-imidazo[1,2-a]pyridin-3-yl]-4-(piperidin-4-yl)-2H-pyrido[3,2-b][1,4]oxazin-3(4H)-one" 
X5N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-imidazo[1,2-a]pyridin-3-yl-4-piperidin-4-yl-pyrido[3,2-b][1,4]oxazin-3-one"                      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X5N "Create component" 2023-10-23 RCSB 
X5N "Initial release"  2024-10-23 RCSB 
# 
