data_VVN
# 
_chem_comp.id                                    VVN 
_chem_comp.name                                  "N-[2-(2-{[(4R)-2-cyanoindolizin-8-yl]oxy}phenoxy)ethyl]-N-methylpropanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H21 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-19 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        363.410 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VVN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8U6I 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VVN N1  N1  N 0 1 N N N N N N 43.857 -3.875 21.642 -4.623 -0.157 0.693  N1  VVN 1  
VVN C2  C1  C 0 1 N N N N N N 44.082 -5.313 21.501 -4.044 1.057  0.775  C2  VVN 2  
VVN N3  N2  N 0 1 N N N N N N 48.892 -1.431 27.790 5.653  -1.789 2.669  N3  VVN 3  
VVN C4  C2  C 0 1 N N N N N N 42.967 -6.019 19.197 -3.796 3.477  0.294  C4  VVN 4  
VVN C5  C3  C 0 1 N N N N N N 43.179 -3.060 20.624 -4.049 -1.293 1.418  C5  VVN 5  
VVN C6  C4  C 0 1 N N N N N N 44.222 -2.720 19.521 -3.032 -2.007 0.525  C6  VVN 6  
VVN C8  C5  C 0 1 Y N N N N N 46.107 -0.538 17.882 -1.010 -2.905 -1.029 C8  VVN 7  
VVN C9  C6  C 0 1 Y N N N N N 47.386 -0.086 17.586 0.004  -3.394 -1.831 C9  VVN 8  
VVN C10 C7  C 0 1 Y N N N N N 48.351 0.023  18.582 1.096  -2.600 -2.133 C10 VVN 9  
VVN C11 C8  C 0 1 Y N N N N N 48.034 -0.315 19.888 1.178  -1.314 -1.632 C11 VVN 10 
VVN C12 C9  C 0 1 Y N N N N N 46.748 -0.762 20.196 0.164  -0.817 -0.827 C12 VVN 11 
VVN C13 C10 C 0 1 Y N N N N N 46.278 0.026  22.340 1.385  1.149  -0.558 C13 VVN 12 
VVN C1  C11 C 0 1 N N N N N N 44.263 -3.243 22.900 -5.830 -0.340 -0.117 C1  VVN 13 
VVN C14 C12 C 0 1 Y N N N N N 45.649 1.153  21.886 1.371  2.250  -1.361 C14 VVN 14 
VVN C15 C13 C 0 1 Y N N N N N 45.523 2.231  22.709 2.561  2.969  -1.578 C15 VVN 15 
VVN C16 C14 C 0 1 Y N N N N N 46.019 2.175  24.002 3.712  2.579  -1.001 C16 VVN 16 
VVN C17 C15 C 0 1 Y N N N N N 46.772 -0.009 23.653 2.604  0.747  0.046  C17 VVN 17 
VVN C18 C16 C 0 1 Y N N N N N 47.444 -0.966 24.420 2.915  -0.301 0.887  C18 VVN 18 
VVN C19 C17 C 0 1 Y N N N N N 47.669 -0.351 25.701 4.294  -0.206 1.171  C19 VVN 19 
VVN C20 C18 C 0 1 N N N N N N 48.373 -0.977 26.898 5.052  -1.089 2.006  C20 VVN 20 
VVN C21 C19 C 0 1 Y N N N N N 47.110 0.941  25.632 4.778  0.897  0.494  C21 VVN 21 
VVN C3  C20 C 0 1 N N N N N N 43.727 -6.186 20.279 -4.639 2.227  0.034  C3  VVN 22 
VVN C7  C21 C 0 1 Y N N N N N 45.778 -0.890 19.197 -0.934 -1.617 -0.524 C7  VVN 23 
VVN N2  N3  N 0 1 Y N N N N N 46.632 1.044  24.436 3.753  1.471  -0.186 N2  VVN 24 
VVN O1  O1  O 0 1 N N N N N N 44.769 -5.873 22.326 -3.045 1.209  1.445  O1  VVN 25 
VVN O2  O2  O 0 1 N N N N N N 44.473 -1.329 19.544 -1.933 -1.133 0.261  O2  VVN 26 
VVN O3  O3  O 0 1 N N N N N N 46.420 -1.112 21.514 0.244  0.447  -0.334 O3  VVN 27 
VVN H6  H1  H 0 1 N N N N N N 43.007 -6.926 18.577 -3.784 3.692  1.362  H6  VVN 28 
VVN H5  H2  H 0 1 N N N N N N 41.928 -5.831 19.505 -2.777 3.307  -0.054 H5  VVN 29 
VVN H20 H3  H 0 1 N N N N N N 43.339 -5.162 18.617 -4.226 4.323  -0.243 H20 VVN 30 
VVN H7  H4  H 0 1 N N N N N N 42.798 -2.133 21.078 -3.552 -0.934 2.320  H7  VVN 31 
VVN H8  H5  H 0 1 N N N N N N 42.342 -3.625 20.187 -4.842 -1.988 1.693  H8  VVN 32 
VVN H10 H6  H 0 1 N N N N N N 43.826 -3.008 18.536 -2.670 -2.902 1.031  H10 VVN 33 
VVN H9  H7  H 0 1 N N N N N N 45.156 -3.267 19.714 -3.508 -2.287 -0.415 H9  VVN 34 
VVN H11 H8  H 0 1 N N N N N N 45.367 -0.618 17.099 -1.863 -3.526 -0.799 H11 VVN 35 
VVN H12 H9  H 0 1 N N N N N N 47.635 0.184  16.570 -0.056 -4.398 -2.224 H12 VVN 36 
VVN H13 H10 H 0 1 N N N N N N 49.344 0.370  18.338 1.886  -2.985 -2.760 H13 VVN 37 
VVN H14 H11 H 0 1 N N N N N N 48.780 -0.233 20.665 2.032  -0.696 -1.868 H14 VVN 38 
VVN H2  H12 H 0 1 N N N N N N 44.752 -3.988 23.544 -5.548 -0.608 -1.135 H2  VVN 39 
VVN H1  H13 H 0 1 N N N N N N 44.966 -2.423 22.688 -6.438 -1.136 0.312  H1  VVN 40 
VVN H3  H14 H 0 1 N N N N N N 43.376 -2.842 23.412 -6.402 0.588  -0.131 H3  VVN 41 
VVN H15 H15 H 0 1 N N N N N N 45.255 1.188  20.881 0.451  2.569  -1.829 H15 VVN 42 
VVN H16 H16 H 0 1 N N N N N N 45.037 3.128  22.355 2.550  3.841  -2.215 H16 VVN 43 
VVN H17 H17 H 0 1 N N N N N N 45.919 3.025  24.660 4.616  3.144  -1.179 H17 VVN 44 
VVN H18 H18 H 0 1 N N N N N N 47.734 -1.960 24.114 2.233  -1.052 1.258  H18 VVN 45 
VVN H19 H19 H 0 1 N N N N N N 47.086 1.687  26.413 5.800  1.244  0.505  H19 VVN 46 
VVN H21 H20 H 0 1 N N N N N N 43.302 -7.090 20.739 -4.650 2.012  -1.035 H21 VVN 47 
VVN H4  H21 H 0 1 N N N N N N 44.713 -6.421 19.852 -5.658 2.397  0.381  H4  VVN 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VVN C9  C8  DOUB Y N 1  
VVN C9  C10 SING Y N 2  
VVN C8  C7  SING Y N 3  
VVN C10 C11 DOUB Y N 4  
VVN C7  O2  SING N N 5  
VVN C7  C12 DOUB Y N 6  
VVN C4  C3  SING N N 7  
VVN C6  O2  SING N N 8  
VVN C6  C5  SING N N 9  
VVN C11 C12 SING Y N 10 
VVN C12 O3  SING N N 11 
VVN C3  C2  SING N N 12 
VVN C5  N1  SING N N 13 
VVN C2  N1  SING N N 14 
VVN C2  O1  DOUB N N 15 
VVN O3  C13 SING N N 16 
VVN N1  C1  SING N N 17 
VVN C14 C13 DOUB Y N 18 
VVN C14 C15 SING Y N 19 
VVN C13 C17 SING Y N 20 
VVN C15 C16 DOUB Y N 21 
VVN C17 C18 DOUB Y N 22 
VVN C17 N2  SING Y N 23 
VVN C16 N2  SING Y N 24 
VVN C18 C19 SING Y N 25 
VVN N2  C21 SING Y N 26 
VVN C21 C19 DOUB Y N 27 
VVN C19 C20 SING N N 28 
VVN C20 N3  TRIP N N 29 
VVN C4  H6  SING N N 30 
VVN C4  H5  SING N N 31 
VVN C4  H20 SING N N 32 
VVN C5  H7  SING N N 33 
VVN C5  H8  SING N N 34 
VVN C6  H10 SING N N 35 
VVN C6  H9  SING N N 36 
VVN C8  H11 SING N N 37 
VVN C9  H12 SING N N 38 
VVN C10 H13 SING N N 39 
VVN C11 H14 SING N N 40 
VVN C1  H2  SING N N 41 
VVN C1  H1  SING N N 42 
VVN C1  H3  SING N N 43 
VVN C14 H15 SING N N 44 
VVN C15 H16 SING N N 45 
VVN C16 H17 SING N N 46 
VVN C18 H18 SING N N 47 
VVN C21 H19 SING N N 48 
VVN C3  H21 SING N N 49 
VVN C3  H4  SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VVN SMILES           ACDLabs              12.01 "CCC(=O)N(C)CCOc1ccccc1Oc1cccn2cc(cc12)C#N"                                                                                          
VVN InChI            InChI                1.06  "InChI=1S/C21H21N3O3/c1-3-21(25)23(2)11-12-26-19-7-4-5-8-20(19)27-18-9-6-10-24-15-16(14-22)13-17(18)24/h4-10,13,15H,3,11-12H2,1-2H3" 
VVN InChIKey         InChI                1.06  ONGVXJRZAFCJEX-UHFFFAOYSA-N                                                                                                          
VVN SMILES_CANONICAL CACTVS               3.385 "CCC(=O)N(C)CCOc1ccccc1Oc2cccn3cc(cc23)C#N"                                                                                          
VVN SMILES           CACTVS               3.385 "CCC(=O)N(C)CCOc1ccccc1Oc2cccn3cc(cc23)C#N"                                                                                          
VVN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(C)CCOc1ccccc1Oc2cccn3c2cc(c3)C#N"                                                                                          
VVN SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(C)CCOc1ccccc1Oc2cccn3c2cc(c3)C#N"                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VVN "SYSTEMATIC NAME" ACDLabs              12.01 "N-[2-(2-{[(4R)-2-cyanoindolizin-8-yl]oxy}phenoxy)ethyl]-N-methylpropanamide" 
VVN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[2-[2-(2-cyanoindolizin-8-yl)oxyphenoxy]ethyl]-~{N}-methyl-propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VVN "Create component" 2023-09-19 RCSB 
VVN "Initial release"  2023-11-08 RCSB 
# 
