data_VNN
# 
_chem_comp.id                                    VNN 
_chem_comp.name                                  "(4-methylpiperazin-1-yl)(5-methylthiophen-3-yl)methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H16 N2 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-09-02 
_chem_comp.pdbx_modified_date                    2022-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        224.323 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VNN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FK4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VNN N1  N1  N 0 1 N N N 26.354 18.980 43.812 3.500  -0.821 0.051  N1  VNN 1  
VNN C7  C1  C 0 1 N N N 26.544 17.777 42.880 2.227  -1.363 0.542  C7  VNN 2  
VNN C8  C2  C 0 1 N N N 27.582 19.899 43.795 3.508  0.647  0.097  C8  VNN 3  
VNN C9  C3  C 0 1 N N N 28.431 19.591 42.542 2.424  1.190  -0.841 C9  VNN 4  
VNN C1  C4  C 0 1 Y N N 27.813 16.512 38.832 -2.854 -0.993 -0.321 C1  VNN 5  
VNN C5  C5  C 0 1 N N N 29.895 17.858 41.545 0.043  1.312  -0.265 C5  VNN 6  
VNN C6  C6  C 0 1 N N N 27.991 17.228 43.004 1.090  -0.903 -0.377 C6  VNN 7  
VNN C4  C7  C 0 1 Y N N 30.117 16.489 39.557 -2.236 1.183  0.741  C4  VNN 8  
VNN C3  C8  C 0 1 Y N N 29.341 17.225 40.378 -1.260 0.661  -0.049 C3  VNN 9  
VNN C2  C9  C 0 1 Y N N 27.976 17.255 39.961 -1.632 -0.595 -0.655 C2  VNN 10 
VNN O   O1  O 0 1 N N N 31.069 18.077 41.704 0.128  2.525  -0.244 O   VNN 11 
VNN S   S1  S 0 1 Y N N 29.269 15.820 38.299 -3.605 0.168  0.760  S   VNN 12 
VNN C   C10 C 0 1 N N N 26.557 16.272 38.118 -3.507 -2.260 -0.807 C   VNN 13 
VNN N   N2  N 0 1 N N N 28.971 18.232 42.584 1.142  0.563  -0.486 N   VNN 14 
VNN C10 C11 C 0 1 N N N 25.110 19.759 43.419 4.634  -1.377 0.802  C10 VNN 15 
VNN H2  H2  H 0 1 N N N 26.361 18.089 41.841 2.273  -2.452 0.547  H2  VNN 16 
VNN H3  H3  H 0 1 N N N 25.830 16.987 43.156 2.044  -1.002 1.554  H3  VNN 17 
VNN H4  H4  H 0 1 N N N 28.184 19.725 44.699 3.307  0.980  1.115  H4  VNN 18 
VNN H5  H5  H 0 1 N N N 27.255 20.949 43.769 4.483  1.016  -0.221 H5  VNN 19 
VNN H6  H6  H 0 1 N N N 29.265 20.306 42.490 2.347  2.271  -0.725 H6  VNN 20 
VNN H7  H7  H 0 1 N N N 27.800 19.698 41.647 2.677  0.947  -1.873 H7  VNN 21 
VNN H8  H8  H 0 1 N N N 28.093 16.337 42.367 1.216  -1.348 -1.365 H8  VNN 22 
VNN H9  H9  H 0 1 N N N 28.183 16.954 44.052 0.132  -1.209 0.043  H9  VNN 23 
VNN H10 H10 H 0 1 N N N 31.178 16.350 39.703 -2.155 2.114  1.282  H10 VNN 24 
VNN H11 H11 H 0 1 N N N 27.187 17.790 40.468 -0.983 -1.155 -1.313 H11 VNN 25 
VNN H12 H12 H 0 1 N N N 26.745 15.616 37.255 -3.280 -3.074 -0.118 H12 VNN 26 
VNN H13 H13 H 0 1 N N N 25.837 15.789 38.795 -4.587 -2.117 -0.856 H13 VNN 27 
VNN H14 H14 H 0 1 N N N 26.146 17.230 37.768 -3.129 -2.507 -1.799 H14 VNN 28 
VNN H15 H15 H 0 1 N N N 24.986 20.618 44.095 4.648  -2.461 0.688  H15 VNN 29 
VNN H16 H16 H 0 1 N N N 25.214 20.118 42.385 5.564  -0.959 0.418  H16 VNN 30 
VNN H17 H17 H 0 1 N N N 24.229 19.104 43.493 4.530  -1.124 1.857  H17 VNN 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VNN C   C1  SING N N 1  
VNN S   C1  SING Y N 2  
VNN S   C4  SING Y N 3  
VNN C1  C2  DOUB Y N 4  
VNN C4  C3  DOUB Y N 5  
VNN C2  C3  SING Y N 6  
VNN C3  C5  SING N N 7  
VNN C5  O   DOUB N N 8  
VNN C5  N   SING N N 9  
VNN C9  N   SING N N 10 
VNN C9  C8  SING N N 11 
VNN N   C6  SING N N 12 
VNN C7  C6  SING N N 13 
VNN C7  N1  SING N N 14 
VNN C10 N1  SING N N 15 
VNN C8  N1  SING N N 16 
VNN C7  H2  SING N N 17 
VNN C7  H3  SING N N 18 
VNN C8  H4  SING N N 19 
VNN C8  H5  SING N N 20 
VNN C9  H6  SING N N 21 
VNN C9  H7  SING N N 22 
VNN C6  H8  SING N N 23 
VNN C6  H9  SING N N 24 
VNN C4  H10 SING N N 25 
VNN C2  H11 SING N N 26 
VNN C   H12 SING N N 27 
VNN C   H13 SING N N 28 
VNN C   H14 SING N N 29 
VNN C10 H15 SING N N 30 
VNN C10 H16 SING N N 31 
VNN C10 H17 SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VNN SMILES           ACDLabs              12.01 "Cc1cc(cs1)C(=O)N1CCN(C)CC1"                                                      
VNN InChI            InChI                1.06  "InChI=1S/C11H16N2OS/c1-9-7-10(8-15-9)11(14)13-5-3-12(2)4-6-13/h7-8H,3-6H2,1-2H3" 
VNN InChIKey         InChI                1.06  SXUGOFSFLSCLEM-UHFFFAOYSA-N                                                       
VNN SMILES_CANONICAL CACTVS               3.385 "CN1CCN(CC1)C(=O)c2csc(C)c2"                                                      
VNN SMILES           CACTVS               3.385 "CN1CCN(CC1)C(=O)c2csc(C)c2"                                                      
VNN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(cs1)C(=O)N2CCN(CC2)C"                                                      
VNN SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(cs1)C(=O)N2CCN(CC2)C"                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VNN "SYSTEMATIC NAME" ACDLabs              12.01 "(4-methylpiperazin-1-yl)(5-methylthiophen-3-yl)methanone"  
VNN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(4-methylpiperazin-1-yl)-(5-methylthiophen-3-yl)methanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VNN "Create component" 2022-09-02 RCSB 
VNN "Initial release"  2022-11-02 RCSB 
# 
