data_S4N
#

_chem_comp.id                                   S4N
_chem_comp.name                                 "(R)-N2-(4-(cyclopropylmethoxy)-3,5-difluorophenyl)-5-(3-methylpiperazin-1-yl)-N4-(tetrahydro-2H-pyran-4-yl)pyrimidine-2,4-diamine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H32 F2 N6 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "~{N}2-[4-(cyclopropylmethoxy)-3,5-bis(fluoranyl)phenyl]-5-[(3~{R})-3-methylpiperazin-1-yl]-~{N}4-(oxan-4-yl)pyrimidine-2,4-diamine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-11-06
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       474.547
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S4N
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7AVZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S4N  C1   C1   C  0  1  N  N  R  19.914  27.209  -25.053  -4.688  -3.728  -0.783  C1   S4N   1  
S4N  C2   C2   C  0  1  N  N  N  20.660  27.808  -23.808  -3.437  -2.847  -0.770  C2   S4N   2  
S4N  C3   C3   C  0  1  N  N  N  19.058  26.616  -22.336  -3.629  -2.610   1.631  C3   S4N   3  
S4N  C7   C4   C  0  1  Y  N  N  21.628  29.204  -19.106  -0.323   0.649   0.353  C7   S4N   4  
S4N  C8   C5   C  0  1  Y  N  N  19.805  29.151  -20.512  -2.608   0.362   0.245  C8   S4N   5  
S4N  C9   C6   C  0  1  N  N  N  17.776  30.404  -19.880  -4.065   2.345   0.027  C9   S4N   6  
S4N  C10  C7   C  0  1  N  N  N  17.446  31.739  -20.526  -3.934   2.770  -1.439  C10  S4N   7  
S4N  C11  C8   C  0  1  N  N  N  16.587  32.560  -19.590  -4.202   4.273  -1.552  C11  S4N   8  
S4N  C12  C9   C  0  1  N  N  N  15.721  30.639  -18.529  -5.667   4.232   0.346  C12  S4N   9  
S4N  C13  C10  C  0  1  N  N  N  16.511  29.702  -19.411  -5.459   2.728   0.535  C13  S4N  10  
S4N  C14  C11  C  0  1  Y  N  N  21.581  30.466  -16.952   2.067   0.991   0.351  C14  S4N  11  
S4N  C15  C12  C  0  1  Y  N  N  20.748  31.531  -17.292   2.365  -0.131  -0.412  C15  S4N  12  
S4N  C16  C13  C  0  1  Y  N  N  20.174  32.272  -16.289   3.652  -0.639  -0.420  C16  S4N  13  
S4N  C19  C14  C  0  1  Y  N  N  21.810  30.167  -15.611   3.060   1.602   1.105  C19  S4N  14  
S4N  C20  C15  C  0  1  N  N  N  18.722  32.155  -13.246   6.803  -0.018  -0.667  C20  S4N  15  
S4N  C21  C16  C  0  1  N  N  N  17.497  31.979  -14.125   8.168  -0.693  -0.520  C21  S4N  16  
S4N  C22  C17  C  0  1  N  N  N  16.477  30.967  -13.732   9.233  -0.367  -1.569  C22  S4N  17  
S4N  F1   F1   F  0  1  N  N  N  19.370  33.305  -16.630   3.942  -1.730  -1.161  F1   S4N  18  
S4N  C17  C18  C  0  1  Y  N  N  20.372  32.018  -14.936   4.644  -0.028   0.334  C17  S4N  19  
S4N  O1   O1   O  0  1  N  N  N  19.734  32.834  -14.009   5.910  -0.528   0.326  O1   S4N  20  
S4N  C23  C19  C  0  1  N  N  N  16.164  32.417  -13.632   9.359   0.194  -0.151  C23  S4N  21  
S4N  C18  C20  C  0  1  Y  N  N  21.210  30.941  -14.648   4.346   1.093   1.097  C18  S4N  22  
S4N  F    F2   F  0  1  N  N  N  21.441  30.644  -13.354   5.312   1.688   1.830  F    S4N  23  
S4N  N5   N1   N  0  1  N  N  N  22.184  29.677  -17.954   0.766   1.509   0.354  N5   S4N  24  
S4N  N2   N2   N  0  1  Y  N  N  22.380  28.384  -19.851  -0.115  -0.653   0.460  N2   S4N  25  
S4N  C6   C21  C  0  1  Y  N  N  21.808  27.931  -20.974  -1.129  -1.508   0.462  C6   S4N  26  
S4N  N3   N3   N  0  1  Y  N  N  20.378  29.603  -19.385  -1.543   1.155   0.250  N3   S4N  27  
S4N  N4   N4   N  0  1  N  N  N  18.548  29.558  -20.784  -3.885   0.895   0.137  N4   S4N  28  
S4N  O    O2   O  0  1  N  N  N  15.397  31.852  -19.221  -5.501   4.565  -1.034  O    S4N  29  
S4N  C5   C22  C  0  1  Y  N  N  20.518  28.272  -21.377  -2.422  -1.024   0.351  C5   S4N  30  
S4N  N    N5   N  0  1  N  N  N  19.899  27.799  -22.556  -3.520  -1.899   0.350  N    S4N  31  
S4N  C4   C23  C  0  1  N  N  N  18.162  26.354  -23.530  -4.880  -3.491   1.619  C4   S4N  32  
S4N  N1   N6   N  0  1  N  N  N  18.979  26.070  -24.715  -4.797  -4.439   0.499  N1   S4N  33  
S4N  C    C24  C  0  1  N  N  N  20.891  26.706  -26.104  -4.586  -4.743  -1.923  C    S4N  34  
S4N  H1   H1   H  0  1  N  N  N  19.319  28.018  -25.501  -5.571  -3.105  -0.928  H1   S4N  35  
S4N  H2   H2   H  0  1  N  N  N  21.580  27.225  -23.651  -2.553  -3.473  -0.651  H2   S4N  36  
S4N  H3   H3   H  0  1  N  N  N  20.922  28.851  -24.039  -3.371  -2.296  -1.708  H3   S4N  37  
S4N  H4   H4   H  0  1  N  N  N  18.432  26.780  -21.446  -2.746  -3.233   1.777  H4   S4N  38  
S4N  H5   H5   H  0  1  N  N  N  19.704  25.741  -22.173  -3.701  -1.886   2.444  H5   S4N  39  
S4N  H6   H6   H  0  1  N  N  N  18.390  30.609  -18.991  -3.308   2.853   0.623  H6   S4N  40  
S4N  H7   H7   H  0  1  N  N  N  18.378  32.283  -20.738  -2.927   2.552  -1.792  H7   S4N  41  
S4N  H8   H8   H  0  1  N  N  N  16.901  31.566  -21.465  -4.660   2.224  -2.042  H8   S4N  42  
S4N  H9   H9   H  0  1  N  N  N  17.164  32.789  -18.682  -3.451   4.820  -0.981  H9   S4N  43  
S4N  H10  H10  H  0  1  N  N  N  16.305  33.498  -20.092  -4.152   4.573  -2.599  H10  S4N  44  
S4N  H11  H11  H  0  1  N  N  N  14.789  30.142  -18.221  -6.673   4.503   0.666  H11  S4N  45  
S4N  H12  H12  H  0  1  N  N  N  16.319  30.883  -17.638  -4.936   4.779   0.942  H12  S4N  46  
S4N  H13  H13  H  0  1  N  N  N  15.903  29.417  -20.283  -6.215   2.181  -0.028  H13  S4N  47  
S4N  H14  H14  H  0  1  N  N  N  16.780  28.800  -18.842  -5.542   2.479   1.594  H14  S4N  48  
S4N  H15  H15  H  0  1  N  N  N  20.557  31.769  -18.328   1.593  -0.606  -0.998  H15  S4N  49  
S4N  H16  H16  H  0  1  N  N  N  22.448  29.341  -15.333   2.828   2.474   1.698  H16  S4N  50  
S4N  H17  H17  H  0  1  N  N  N  18.461  32.753  -12.360   6.914   1.059  -0.536  H17  S4N  51  
S4N  H18  H18  H  0  1  N  N  N  19.095  31.171  -12.927   6.400  -0.224  -1.658  H18  S4N  52  
S4N  H19  H19  H  0  1  N  N  N  17.671  32.091  -15.205   8.151  -1.706  -0.118  H19  S4N  53  
S4N  H20  H20  H  0  1  N  N  N  15.989  30.351  -14.501   9.917  -1.165  -1.857  H20  S4N  54  
S4N  H21  H21  H  0  1  N  N  N  16.618  30.370  -12.819   8.962   0.329  -2.363  H21  S4N  55  
S4N  H22  H22  H  0  1  N  N  N  16.072  32.893  -12.644   9.170   1.258  -0.012  H22  S4N  56  
S4N  H23  H23  H  0  1  N  N  N  15.444  32.873  -14.327  10.125  -0.236   0.494  H23  S4N  57  
S4N  H24  H24  H  0  1  N  N  N  23.142  29.433  -17.800   0.627   2.469   0.358  H24  S4N  58  
S4N  H25  H25  H  0  1  N  N  N  22.379  27.264  -21.603  -0.949  -2.570   0.549  H25  S4N  59  
S4N  H26  H26  H  0  1  N  N  N  18.600  30.055  -21.650  -4.657   0.309   0.134  H26  S4N  60  
S4N  H27  H27  H  0  1  N  N  N  17.539  27.241  -23.720  -4.946  -4.041   2.557  H27  S4N  61  
S4N  H28  H28  H  0  1  N  N  N  17.515  25.490  -23.318  -5.764  -2.865   1.501  H28  S4N  62  
S4N  H29  H29  H  0  1  N  N  N  18.372  25.910  -25.493  -5.586  -5.068   0.498  H29  S4N  63  
S4N  H31  H31  H  0  1  N  N  N  21.588  27.513  -26.373  -5.477  -5.372  -1.930  H31  S4N  64  
S4N  H32  H32  H  0  1  N  N  N  21.456  25.853  -25.701  -4.506  -4.216  -2.873  H32  S4N  65  
S4N  H33  H33  H  0  1  N  N  N  20.335  26.388  -26.998  -3.703  -5.366  -1.777  H33  S4N  66  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S4N  C    C1   SING  N  N   1  
S4N  C1   N1   SING  N  N   2  
S4N  C1   C2   SING  N  N   3  
S4N  N1   C4   SING  N  N   4  
S4N  C2   N    SING  N  N   5  
S4N  C4   C3   SING  N  N   6  
S4N  N    C3   SING  N  N   7  
S4N  N    C5   SING  N  N   8  
S4N  C5   C6   DOUB  Y  N   9  
S4N  C5   C8   SING  Y  N  10  
S4N  C6   N2   SING  Y  N  11  
S4N  N4   C8   SING  N  N  12  
S4N  N4   C9   SING  N  N  13  
S4N  C10  C9   SING  N  N  14  
S4N  C10  C11  SING  N  N  15  
S4N  C8   N3   DOUB  Y  N  16  
S4N  C9   C13  SING  N  N  17  
S4N  N2   C7   DOUB  Y  N  18  
S4N  C11  O    SING  N  N  19  
S4N  C13  C12  SING  N  N  20  
S4N  N3   C7   SING  Y  N  21  
S4N  O    C12  SING  N  N  22  
S4N  C7   N5   SING  N  N  23  
S4N  N5   C14  SING  N  N  24  
S4N  C15  C14  DOUB  Y  N  25  
S4N  C15  C16  SING  Y  N  26  
S4N  C14  C19  SING  Y  N  27  
S4N  F1   C16  SING  N  N  28  
S4N  C16  C17  DOUB  Y  N  29  
S4N  C19  C18  DOUB  Y  N  30  
S4N  C17  C18  SING  Y  N  31  
S4N  C17  O1   SING  N  N  32  
S4N  C18  F    SING  N  N  33  
S4N  C21  C22  SING  N  N  34  
S4N  C21  C23  SING  N  N  35  
S4N  C21  C20  SING  N  N  36  
S4N  O1   C20  SING  N  N  37  
S4N  C22  C23  SING  N  N  38  
S4N  C1   H1   SING  N  N  39  
S4N  C2   H2   SING  N  N  40  
S4N  C2   H3   SING  N  N  41  
S4N  C3   H4   SING  N  N  42  
S4N  C3   H5   SING  N  N  43  
S4N  C9   H6   SING  N  N  44  
S4N  C10  H7   SING  N  N  45  
S4N  C10  H8   SING  N  N  46  
S4N  C11  H9   SING  N  N  47  
S4N  C11  H10  SING  N  N  48  
S4N  C12  H11  SING  N  N  49  
S4N  C12  H12  SING  N  N  50  
S4N  C13  H13  SING  N  N  51  
S4N  C13  H14  SING  N  N  52  
S4N  C15  H15  SING  N  N  53  
S4N  C19  H16  SING  N  N  54  
S4N  C20  H17  SING  N  N  55  
S4N  C20  H18  SING  N  N  56  
S4N  C21  H19  SING  N  N  57  
S4N  C22  H20  SING  N  N  58  
S4N  C22  H21  SING  N  N  59  
S4N  C23  H22  SING  N  N  60  
S4N  C23  H23  SING  N  N  61  
S4N  N5   H24  SING  N  N  62  
S4N  C6   H25  SING  N  N  63  
S4N  N4   H26  SING  N  N  64  
S4N  C4   H27  SING  N  N  65  
S4N  C4   H28  SING  N  N  66  
S4N  N1   H29  SING  N  N  67  
S4N  C    H31  SING  N  N  68  
S4N  C    H32  SING  N  N  69  
S4N  C    H33  SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S4N  InChI             InChI                 1.03   "InChI=1S/C24H32F2N6O2/c1-15-13-32(7-6-27-15)21-12-28-24(31-23(21)29-17-4-8-33-9-5-17)30-18-10-19(25)22(20(26)11-18)34-14-16-2-3-16/h10-12,15-17,27H,2-9,13-14H2,1H3,(H2,28,29,30,31)/t15-/m1/s1"  
S4N  InChIKey          InChI                 1.03   FPYULJCYPOLXGV-OAHLLOKOSA-N  
S4N  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H]1CN(CCN1)c2cnc(Nc3cc(F)c(OCC4CC4)c(F)c3)nc2NC5CCOCC5"  
S4N  SMILES            CACTVS                3.385  "C[CH]1CN(CCN1)c2cnc(Nc3cc(F)c(OCC4CC4)c(F)c3)nc2NC5CCOCC5"  
S4N  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H]1CN(CCN1)c2cnc(nc2NC3CCOCC3)Nc4cc(c(c(c4)F)OCC5CC5)F"  
S4N  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1CN(CCN1)c2cnc(nc2NC3CCOCC3)Nc4cc(c(c(c4)F)OCC5CC5)F"  
#
_pdbx_chem_comp_identifier.comp_id          S4N
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}2-[4-(cyclopropylmethoxy)-3,5-bis(fluoranyl)phenyl]-5-[(3~{R})-3-methylpiperazin-1-yl]-~{N}4-(oxan-4-yl)pyrimidine-2,4-diamine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S4N  "Create component"  2020-11-06  PDBE  
S4N  "Initial release"   2021-03-03  RCSB  
S4N  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     S4N
_pdbx_chem_comp_synonyms.name        "~{N}2-[4-(cyclopropylmethoxy)-3,5-bis(fluoranyl)phenyl]-5-[(3~{R})-3-methylpiperazin-1-yl]-~{N}4-(oxan-4-yl)pyrimidine-2,4-diamine"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
