data_O7N
#

_chem_comp.id                                   O7N
_chem_comp.name                                 "1-[(8~{R},15~{S},18~{S})-15,18-bis(4-azanylbutyl)-4,7,14,17,20-pentakis(oxidanylidene)-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C30 H50 N10 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-18
_chem_comp.pdbx_modified_date                   2020-07-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       630.782
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    O7N
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6Y3B
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
O7N  O3   O1   O  0  1  N  N  N  10.270  -16.541   2.451  -3.826   4.191   1.019  O3   O7N   1  
O7N  C4   C1   C  0  1  N  N  N   4.003  -15.006   7.069  -3.678  -3.530  -1.391  C4   O7N   2  
O7N  C5   C2   C  0  1  N  N  N   2.803  -15.679   6.413  -2.492  -3.921  -2.275  C5   O7N   3  
O7N  O4   O2   O  0  1  N  N  N   7.405  -14.782   3.880  -4.269   0.872  -2.362  O4   O7N   4  
O7N  C6   C3   C  0  1  N  N  N   2.411  -14.917   4.119  -0.150  -3.581  -1.840  C6   O7N   5  
O7N  N1   N1   N  0  1  N  N  N  10.010  -11.068   6.853  -7.052  -1.674   1.156  N1   O7N   6  
O7N  C7   C4   C  0  1  N  N  S   1.779  -13.840   3.247   1.098  -3.768  -1.016  C7   O7N   7  
O7N  C8   C5   C  0  1  N  N  N   1.247  -14.448   1.951   0.735  -3.780   0.470  C8   O7N   8  
O7N  N2   N2   N  0  1  N  N  N   8.294  -12.568   6.537  -5.013  -0.537   0.687  N2   O7N   9  
O7N  C9   C6   C  0  1  N  N  N   0.659  -13.411   1.006   1.994  -4.034   1.301  C9   O7N  10  
O7N  C10  C7   C  0  1  N  N  N  -0.627  -12.749   1.489   1.631  -4.045   2.787  C10  O7N  11  
O7N  C11  C8   C  0  1  N  N  N  -1.085  -11.688   0.504   2.891  -4.299   3.618  C11  O7N  12  
O7N  C12  C9   C  0  1  N  N  N   2.676  -11.564   3.414   2.193  -1.739  -0.298  C12  O7N  13  
O7N  N3   N3   N  0  1  N  N  N   2.183  -14.803   5.426  -1.314  -4.153  -1.409  N3   O7N  14  
O7N  C13  C10  C  0  1  N  N  S   3.721  -10.573   2.911   3.123  -0.575  -0.522  C13  O7N  15  
O7N  C14  C11  C  0  1  N  N  N   2.978   -9.385   2.289   4.549  -1.089  -0.733  C14  O7N  16  
O7N  C15  C12  C  0  1  N  N  N   3.876   -8.284   1.753   5.467   0.083  -1.082  C15  O7N  17  
O7N  N4   N4   N  0  1  N  N  N  -2.470  -11.214   0.713   2.542  -4.310   5.045  N4   O7N  18  
O7N  N    N5   N  0  1  N  N  N   8.965  -11.240   4.671  -5.420  -1.433   2.787  N    O7N  19  
O7N  C    C13  C  0  1  N  N  N   9.101  -11.586   5.945  -5.821  -1.218   1.566  C    O7N  20  
O7N  O    O3   O  0  1  N  N  N   3.111  -15.811   3.616  -0.122  -2.933  -2.865  O    O7N  21  
O7N  C1   C14  C  0  1  N  N  R   7.307  -13.315   5.777  -5.464  -0.295  -0.686  C1   O7N  22  
O7N  C16  C15  C  0  1  N  N  N   3.117   -7.020   1.333   6.893  -0.431  -1.293  C16  O7N  23  
O7N  C17  C16  C  0  1  N  N  N   2.199   -7.190   0.140   7.812   0.741  -1.643  C17  O7N  24  
O7N  C18  C17  C  0  1  N  N  N   5.936  -11.390   2.231   2.796   1.616   0.421  C18  O7N  25  
O7N  C19  C18  C  0  1  N  N  N   6.763  -11.779   1.022   2.735   2.576   1.580  C19  O7N  26  
O7N  C2   C19  C  0  1  N  N  N   6.243  -13.855   6.740  -5.159  -1.523  -1.546  C2   O7N  27  
O7N  C20  C20  C  0  1  Y  N  N   8.251  -11.645   1.231   2.072   3.856   1.140  C20  O7N  28  
O7N  C21  C21  C  0  1  Y  N  N   8.890  -10.428   1.058   2.841   4.913   0.690  C21  O7N  29  
O7N  C22  C22  C  0  1  Y  N  N  10.258  -10.323   1.228   2.233   6.086   0.284  C22  O7N  30  
O7N  C23  C23  C  0  1  Y  N  N  11.005  -11.443   1.557   0.856   6.203   0.333  C23  O7N  31  
O7N  C24  C24  C  0  1  Y  N  N  10.393  -12.679   1.707   0.087   5.146   0.784  C24  O7N  32  
O7N  C25  C25  C  0  1  Y  N  N   9.016  -12.764   1.542   0.696   3.972   1.186  C25  O7N  33  
O7N  C26  C26  C  0  1  N  N  N  11.185  -13.912   2.068  -1.412   5.274   0.836  C26  O7N  34  
O7N  C27  C27  C  0  1  N  N  N  10.226  -15.737   3.384  -3.254   3.972  -0.027  C27  O7N  35  
O7N  C28  C28  C  0  1  N  N  N   9.621  -16.131   4.721  -3.917   3.158  -1.107  C28  O7N  36  
O7N  C29  C29  C  0  1  N  N  N   7.911  -14.448   4.945  -4.745   0.904  -1.247  C29  O7N  37  
O7N  C3   C30  C  0  1  N  N  N   5.084  -14.563   6.055  -3.737  -2.007  -1.258  C3   O7N  38  
O7N  N5   N6   N  0  1  N  N  N   2.782  -12.821   2.964   2.024  -2.652  -1.294  N5   O7N  39  
O7N  N6   N7   N  0  1  N  N  N   1.781   -5.836  -0.342   9.180   0.247  -1.845  N6   O7N  40  
O7N  N7   N8   N  0  1  N  N  N   4.644  -11.177   1.957   3.078   0.302   0.671  N7   O7N  41  
O7N  N8   N9   N  0  1  N  N  N  10.710  -14.496   3.316  -2.000   4.459  -0.245  N8   O7N  42  
O7N  N9   N10  N  0  1  N  N  N   9.011  -15.027   5.424  -4.638   2.028  -0.477  N9   O7N  43  
O7N  O1   O4   O  0  1  N  N  N   1.795  -11.193   4.198   1.603  -1.861   0.754  O1   O7N  44  
O7N  O2   O5   O  0  1  N  N  N   6.429  -11.246   3.347   2.599   2.001  -0.712  O2   O7N  45  
O7N  H1   H1   H  0  1  N  N  N   4.457  -15.715   7.777  -4.603  -3.891  -1.842  H1   O7N  46  
O7N  H2   H2   H  0  1  N  N  N   3.651  -14.118   7.614  -3.558  -3.977  -0.403  H2   O7N  47  
O7N  H3   H3   H  0  1  N  N  N   2.063  -15.927   7.188  -2.729  -4.832  -2.823  H3   O7N  48  
O7N  H4   H4   H  0  1  N  N  N   3.136  -16.601   5.915  -2.280  -3.115  -2.978  H4   O7N  49  
O7N  H5   H5   H  0  1  N  N  N  10.024  -11.406   7.794  -7.622  -2.155   1.776  H5   O7N  50  
O7N  H6   H6   H  0  1  N  N  N  10.652  -10.356   6.567  -7.351  -1.514   0.247  H6   O7N  51  
O7N  H7   H7   H  0  1  N  N  N   0.939  -13.389   3.796   1.573  -4.712  -1.283  H7   O7N  52  
O7N  H8   H8   H  0  1  N  N  N   0.463  -15.178   2.202   0.306  -2.817   0.746  H8   O7N  53  
O7N  H9   H9   H  0  1  N  N  N   2.075  -14.960   1.438   0.009  -4.570   0.660  H9   O7N  54  
O7N  H10  H10  H  0  1  N  N  N   8.401  -12.760   7.513  -4.145  -0.215   0.975  H10  O7N  55  
O7N  H11  H11  H  0  1  N  N  N   0.448  -13.906   0.047   2.424  -4.997   1.024  H11  O7N  56  
O7N  H12  H12  H  0  1  N  N  N   1.411  -12.623   0.854   2.721  -3.244   1.110  H12  O7N  57  
O7N  H13  H13  H  0  1  N  N  N  -0.447  -12.280   2.468   1.202  -3.082   3.063  H13  O7N  58  
O7N  H14  H14  H  0  1  N  N  N  -1.412  -13.513   1.588   0.905  -4.835   2.977  H14  O7N  59  
O7N  H15  H15  H  0  1  N  N  N  -1.015  -12.108  -0.510   3.320  -5.262   3.341  H15  O7N  60  
O7N  H16  H16  H  0  1  N  N  N  -0.409  -10.824   0.591   3.617  -3.509   3.427  H16  O7N  61  
O7N  H17  H17  H  0  1  N  N  N   1.561  -14.087   5.744  -1.364  -4.676  -0.594  H17  O7N  62  
O7N  H18  H18  H  0  1  N  N  N   4.290  -10.205   3.777   2.803  -0.014  -1.400  H18  O7N  63  
O7N  H19  H19  H  0  1  N  N  N   2.324   -8.949   3.059   4.901  -1.567   0.182  H19  O7N  64  
O7N  H20  H20  H  0  1  N  N  N   2.365   -9.762   1.457   4.557  -1.813  -1.547  H20  O7N  65  
O7N  H21  H21  H  0  1  N  N  N   4.416   -8.672   0.877   5.115   0.561  -1.996  H21  O7N  66  
O7N  H22  H22  H  0  1  N  N  N   4.597   -8.011   2.537   5.459   0.807  -0.268  H22  O7N  67  
O7N  H23  H23  H  0  1  N  N  N  -2.693  -10.521   0.027   1.822  -4.991   5.236  H23  O7N  68  
O7N  H24  H24  H  0  1  N  N  N  -3.102  -11.984   0.626   3.358  -4.476   5.615  H24  O7N  69  
O7N  H26  H26  H  0  1  N  N  N   9.615  -10.529   4.405  -5.990  -1.914   3.407  H26  O7N  70  
O7N  H27  H27  H  0  1  N  N  N   6.805  -12.625   5.083  -6.538  -0.108  -0.688  H27  O7N  71  
O7N  H28  H28  H  0  1  N  N  N   3.857   -6.244   1.086   7.246  -0.909  -0.379  H28  O7N  72  
O7N  H29  H29  H  0  1  N  N  N   2.508   -6.688   2.187   6.901  -1.155  -2.108  H29  O7N  73  
O7N  H30  H30  H  0  1  N  N  N   1.311   -7.768   0.436   7.459   1.219  -2.557  H30  O7N  74  
O7N  H31  H31  H  0  1  N  N  N   2.731   -7.721  -0.663   7.803   1.465  -0.828  H31  O7N  75  
O7N  H32  H32  H  0  1  N  N  N   6.472  -11.133   0.181   2.159   2.129   2.391  H32  O7N  76  
O7N  H33  H33  H  0  1  N  N  N   6.541  -12.827   0.773   3.745   2.790   1.928  H33  O7N  77  
O7N  H34  H34  H  0  1  N  N  N   6.727  -14.568   7.424  -5.867  -2.317  -1.311  H34  O7N  78  
O7N  H35  H35  H  0  1  N  N  N   5.839  -13.010   7.317  -5.246  -1.259  -2.600  H35  O7N  79  
O7N  H36  H36  H  0  1  N  N  N   8.315   -9.555   0.788   3.916   4.823   0.655  H36  O7N  80  
O7N  H37  H37  H  0  1  N  N  N  10.745   -9.367   1.104   2.833   6.911  -0.071  H37  O7N  81  
O7N  H38  H38  H  0  1  N  N  N  12.072  -11.353   1.698   0.381   7.121   0.019  H38  O7N  82  
O7N  H39  H39  H  0  1  N  N  N   8.529  -13.721   1.658   0.096   3.145   1.536  H39  O7N  83  
O7N  H40  H40  H  0  1  N  N  N  11.081  -14.654   1.262  -1.776   4.918   1.800  H40  O7N  84  
O7N  H41  H41  H  0  1  N  N  N  12.244  -13.638   2.180  -1.695   6.318   0.701  H41  O7N  85  
O7N  H42  H42  H  0  1  N  N  N   8.853  -16.898   4.543  -4.623   3.782  -1.654  H42  O7N  86  
O7N  H43  H43  H  0  1  N  N  N  10.417  -16.550   5.354  -3.161   2.773  -1.791  H43  O7N  87  
O7N  H44  H44  H  0  1  N  N  N   4.629  -13.877   5.326  -3.453  -1.720  -0.246  H44  O7N  88  
O7N  H45  H45  H  0  1  N  N  N   5.468  -15.452   5.533  -3.047  -1.554  -1.971  H45  O7N  89  
O7N  H46  H46  H  0  1  N  N  N   3.579  -13.070   2.413   2.489  -2.574  -2.142  H46  O7N  90  
O7N  H47  H47  H  0  1  N  N  N   1.174   -5.935  -1.130   9.807   1.003  -2.078  H47  O7N  91  
O7N  H48  H48  H  0  1  N  N  N   1.300   -5.355   0.391   9.506  -0.256  -1.034  H48  O7N  92  
O7N  H50  H50  H  0  1  N  N  N   4.296  -11.444   1.058   3.238  -0.033   1.567  H50  O7N  93  
O7N  H51  H51  H  0  1  N  N  N  10.748  -13.947   4.151  -1.519   4.280  -1.069  H51  O7N  94  
O7N  H52  H52  H  0  1  N  N  N   9.417  -14.695   6.276  -5.008   2.081   0.418  H52  O7N  95  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
O7N  N6   C17  SING  N  N   1  
O7N  C17  C16  SING  N  N   2  
O7N  C11  N4   SING  N  N   3  
O7N  C11  C10  SING  N  N   4  
O7N  C9   C10  SING  N  N   5  
O7N  C9   C8   SING  N  N   6  
O7N  C19  C20  SING  N  N   7  
O7N  C19  C18  SING  N  N   8  
O7N  C21  C22  DOUB  Y  N   9  
O7N  C21  C20  SING  Y  N  10  
O7N  C22  C23  SING  Y  N  11  
O7N  C20  C25  DOUB  Y  N  12  
O7N  C16  C15  SING  N  N  13  
O7N  C25  C24  SING  Y  N  14  
O7N  C23  C24  DOUB  Y  N  15  
O7N  C24  C26  SING  N  N  16  
O7N  C15  C14  SING  N  N  17  
O7N  C8   C7   SING  N  N  18  
O7N  N7   C18  SING  N  N  19  
O7N  N7   C13  SING  N  N  20  
O7N  C26  N8   SING  N  N  21  
O7N  C18  O2   DOUB  N  N  22  
O7N  C14  C13  SING  N  N  23  
O7N  O3   C27  DOUB  N  N  24  
O7N  C13  C12  SING  N  N  25  
O7N  N5   C7   SING  N  N  26  
O7N  N5   C12  SING  N  N  27  
O7N  C7   C6   SING  N  N  28  
O7N  N8   C27  SING  N  N  29  
O7N  C27  C28  SING  N  N  30  
O7N  C12  O1   DOUB  N  N  31  
O7N  O    C6   DOUB  N  N  32  
O7N  O4   C29  DOUB  N  N  33  
O7N  C6   N3   SING  N  N  34  
O7N  N    C    DOUB  N  N  35  
O7N  C28  N9   SING  N  N  36  
O7N  C29  N9   SING  N  N  37  
O7N  C29  C1   SING  N  N  38  
O7N  N3   C5   SING  N  N  39  
O7N  C1   N2   SING  N  N  40  
O7N  C1   C2   SING  N  N  41  
O7N  C    N2   SING  N  N  42  
O7N  C    N1   SING  N  N  43  
O7N  C3   C2   SING  N  N  44  
O7N  C3   C4   SING  N  N  45  
O7N  C5   C4   SING  N  N  46  
O7N  C4   H1   SING  N  N  47  
O7N  C4   H2   SING  N  N  48  
O7N  C5   H3   SING  N  N  49  
O7N  C5   H4   SING  N  N  50  
O7N  N1   H5   SING  N  N  51  
O7N  N1   H6   SING  N  N  52  
O7N  C7   H7   SING  N  N  53  
O7N  C8   H8   SING  N  N  54  
O7N  C8   H9   SING  N  N  55  
O7N  N2   H10  SING  N  N  56  
O7N  C9   H11  SING  N  N  57  
O7N  C9   H12  SING  N  N  58  
O7N  C10  H13  SING  N  N  59  
O7N  C10  H14  SING  N  N  60  
O7N  C11  H15  SING  N  N  61  
O7N  C11  H16  SING  N  N  62  
O7N  N3   H17  SING  N  N  63  
O7N  C13  H18  SING  N  N  64  
O7N  C14  H19  SING  N  N  65  
O7N  C14  H20  SING  N  N  66  
O7N  C15  H21  SING  N  N  67  
O7N  C15  H22  SING  N  N  68  
O7N  N4   H23  SING  N  N  69  
O7N  N4   H24  SING  N  N  70  
O7N  N    H26  SING  N  N  71  
O7N  C1   H27  SING  N  N  72  
O7N  C16  H28  SING  N  N  73  
O7N  C16  H29  SING  N  N  74  
O7N  C17  H30  SING  N  N  75  
O7N  C17  H31  SING  N  N  76  
O7N  C19  H32  SING  N  N  77  
O7N  C19  H33  SING  N  N  78  
O7N  C2   H34  SING  N  N  79  
O7N  C2   H35  SING  N  N  80  
O7N  C21  H36  SING  N  N  81  
O7N  C22  H37  SING  N  N  82  
O7N  C23  H38  SING  N  N  83  
O7N  C25  H39  SING  N  N  84  
O7N  C26  H40  SING  N  N  85  
O7N  C26  H41  SING  N  N  86  
O7N  C28  H42  SING  N  N  87  
O7N  C28  H43  SING  N  N  88  
O7N  C3   H44  SING  N  N  89  
O7N  C3   H45  SING  N  N  90  
O7N  N5   H46  SING  N  N  91  
O7N  N6   H47  SING  N  N  92  
O7N  N6   H48  SING  N  N  93  
O7N  N7   H50  SING  N  N  94  
O7N  N8   H51  SING  N  N  95  
O7N  N9   H52  SING  N  N  96  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
O7N  InChI             InChI                 1.03   "InChI=1S/C30H50N10O5/c31-13-4-1-10-22-27(43)35-15-6-3-12-23(40-30(33)34)28(44)37-19-26(42)36-18-21-9-7-8-20(16-21)17-25(41)38-24(29(45)39-22)11-2-5-14-32/h7-9,16,22-24H,1-6,10-15,17-19,31-32H2,(H,35,43)(H,36,42)(H,37,44)(H,38,41)(H,39,45)(H4,33,34,40)/t22-,23+,24-/m0/s1"  
O7N  InChIKey          InChI                 1.03   MJPHQBODCHXACB-VXNXHJTFSA-N  
O7N  SMILES_CANONICAL  CACTVS                3.385  "NCCCC[C@@H]1NC(=O)Cc2cccc(CNC(=O)CNC(=O)[C@@H](CCCCNC(=O)[C@H](CCCCN)NC1=O)NC(N)=N)c2"  
O7N  SMILES            CACTVS                3.385  "NCCCC[CH]1NC(=O)Cc2cccc(CNC(=O)CNC(=O)[CH](CCCCNC(=O)[CH](CCCCN)NC1=O)NC(N)=N)c2"  
O7N  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[H]/N=C(/N)\N[C@@H]1CCCCNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)Cc2cccc(c2)CNC(=O)CNC1=O)CCCCN)CCCCN"  
O7N  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc2cc(c1)CNC(=O)CNC(=O)C(CCCCNC(=O)C(NC(=O)C(NC(=O)C2)CCCCN)CCCCN)NC(=N)N"  
#
_pdbx_chem_comp_identifier.comp_id          O7N
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "1-[(8~{R},15~{S},18~{S})-15,18-bis(4-azanylbutyl)-4,7,14,17,20-pentakis(oxidanylidene)-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
O7N  "Create component"  2020-02-18  PDBE  
O7N  "Initial release"   2020-07-08  RCSB  
##
