data_L7N
#

_chem_comp.id                                   L7N
_chem_comp.name                                 "(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylidene-[(4~{R})-3-oxidanylidene-1,2-oxazolidin-4-yl]azanium"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H15 N3 O7 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2019-07-26
_chem_comp.pdbx_modified_date                   2020-03-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       332.226
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    L7N
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6SCZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L7N  C3    C1   C  0  1  Y  N  N   5.716  27.638  -12.602  -0.956   2.226  -0.099  C3    L7N   1  
L7N  C4    C2   C  0  1  Y  N  N   4.646  26.964  -12.039  -0.320   0.975  -0.069  C4    L7N   2  
L7N  C5    C3   C  0  1  Y  N  N   4.815  25.641  -11.661   1.079   0.948  -0.031  C5    L7N   3  
L7N  C6    C4   C  0  1  Y  N  N   6.046  25.025  -11.860   1.772   2.141  -0.026  C6    L7N   4  
L7N  C2    C5   C  0  1  Y  N  N   6.923  26.987  -12.783  -0.177   3.374  -0.091  C2    L7N   5  
L7N  N     N1   N  1  1  N  N  N   2.821  28.370  -12.845  -2.388  -0.234  -0.218  N     L7N   6  
L7N  CA    C6   C  0  1  N  N  R   1.572  29.089  -12.667  -3.174  -1.468  -0.144  CA    L7N   7  
L7N  C     C7   C  0  1  N  N  N   1.209  29.858  -13.896  -4.290  -1.333   0.875  C     L7N   8  
L7N  O     O1   O  0  1  N  N  N   2.010  30.474  -14.574  -4.186  -0.886   1.998  O     L7N   9  
L7N  CB    C8   C  0  1  N  N  N   0.297  28.269  -12.518  -3.941  -1.708  -1.464  CB    L7N  10  
L7N  OG    O2   O  0  1  N  N  N  -0.681  29.088  -13.161  -5.183  -2.275  -1.006  OG    L7N  11  
L7N  ND    N2   N  0  1  N  N  N  -0.086  29.763  -14.155  -5.418  -1.802   0.306  ND    L7N  12  
L7N  C2A   C9   C  0  1  N  N  N   8.089  27.715  -13.400  -0.843   4.726  -0.123  C2A   L7N  13  
L7N  C4A   C10  C  0  1  N  N  N   3.361  27.677  -11.844  -1.103  -0.276  -0.075  C4A   L7N  14  
L7N  C5A   C11  C  0  1  N  N  N   3.685  24.853  -11.038   1.818  -0.365   0.003  C5A   L7N  15  
L7N  N1    N3   N  0  1  Y  N  N   7.063  25.697  -12.411   1.138   3.297  -0.055  N1    L7N  16  
L7N  O1    O3   O  0  1  N  N  N   5.583  28.910  -12.970  -2.310   2.312  -0.142  O1    L7N  17  
L7N  O1P   O4   O  0  1  N  N  N   0.626  24.500  -10.665   5.790  -0.660   0.244  O1P   L7N  18  
L7N  O2P   O5   O  0  1  N  N  N   1.781  22.348  -11.073   4.252  -2.144  -1.288  O2P   L7N  19  
L7N  O3P   O6   O  0  1  N  N  N   0.607  23.488  -12.932   4.040  -2.191   1.226  O3P   L7N  20  
L7N  O4P   O7   O  0  1  N  N  N   2.751  24.487  -12.049   3.225  -0.119   0.038  O4P   L7N  21  
L7N  P     P1   P  0  1  N  N  N   1.406  23.685  -11.668   4.320  -1.298   0.080  P     L7N  22  
L7N  H6    H1   H  0  1  N  N  N   6.182  23.994  -11.567   2.852   2.128   0.002  H6    L7N  23  
L7N  HA    H2   H  0  1  N  N  N   1.655  29.780  -11.815  -2.534  -2.318   0.091  HA    L7N  24  
L7N  HB2   H3   H  0  1  N  N  N   0.048  28.112  -11.458  -4.115  -0.767  -1.987  HB2   L7N  25  
L7N  HB1   H4   H  0  1  N  N  N   0.391  27.295  -13.021  -3.404  -2.409  -2.102  HB1   L7N  26  
L7N  H3    H5   H  0  1  N  N  N  -0.546  30.135  -14.961  -6.284  -1.814   0.743  H3    L7N  27  
L7N  H2A2  H6   H  0  0  N  N  N   8.953  27.037  -13.463  -1.030   5.063   0.896  H2A2  L7N  28  
L7N  H2A1  H7   H  0  0  N  N  N   7.816  28.056  -14.410  -0.191   5.440  -0.628  H2A1  L7N  29  
L7N  H2A3  H8   H  0  0  N  N  N   8.349  28.584  -12.778  -1.788   4.653  -0.661  H2A3  L7N  30  
L7N  H4A   H9   H  0  1  N  N  N   2.861  27.634  -10.888  -0.604  -1.227   0.039  H4A   L7N  31  
L7N  H5A2  H10  H  0  0  N  N  N   3.182  25.470  -10.279   1.525  -0.923   0.892  H5A2  L7N  32  
L7N  H5A1  H11  H  0  0  N  N  N   4.088  23.946  -10.564   1.572  -0.944  -0.887  H5A1  L7N  33  
L7N  H2    H12  H  0  1  N  N  N   4.700  29.205  -12.779  -2.730   2.344   0.729  H2    L7N  34  
L7N  H4    H13  H  0  1  N  N  N  -0.220  24.729  -11.032   6.501  -1.314   0.277  H4    L7N  35  
L7N  H5    H14  H  0  1  N  N  N   1.436  21.650  -11.618   4.426  -1.621  -2.083  H5    L7N  36  
L7N  H1    H15  H  0  1  N  N  N   3.282  28.396  -13.732  -2.831   0.615  -0.374  H1    L7N  37  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L7N  O    C     DOUB  N  N   1  
L7N  ND   C     SING  N  N   2  
L7N  ND   OG    SING  N  N   3  
L7N  C    CA    SING  N  N   4  
L7N  C2A  C2    SING  N  N   5  
L7N  OG   CB    SING  N  N   6  
L7N  O1   C3    SING  N  N   7  
L7N  O3P  P     DOUB  N  N   8  
L7N  N    CA    SING  N  N   9  
L7N  N    C4A   DOUB  N  N  10  
L7N  C2   C3    DOUB  Y  N  11  
L7N  C2   N1    SING  Y  N  12  
L7N  CA   CB    SING  N  N  13  
L7N  C3   C4    SING  Y  N  14  
L7N  N1   C6    DOUB  Y  N  15  
L7N  O4P  P     SING  N  N  16  
L7N  O4P  C5A   SING  N  N  17  
L7N  C4   C4A   SING  N  N  18  
L7N  C4   C5    DOUB  Y  N  19  
L7N  C6   C5    SING  Y  N  20  
L7N  P    O2P   SING  N  N  21  
L7N  P    O1P   SING  N  N  22  
L7N  C5   C5A   SING  N  N  23  
L7N  C6   H6    SING  N  N  24  
L7N  CA   HA    SING  N  N  25  
L7N  CB   HB2   SING  N  N  26  
L7N  CB   HB1   SING  N  N  27  
L7N  ND   H3    SING  N  N  28  
L7N  C2A  H2A2  SING  N  N  29  
L7N  C2A  H2A1  SING  N  N  30  
L7N  C2A  H2A3  SING  N  N  31  
L7N  C4A  H4A   SING  N  N  32  
L7N  C5A  H5A2  SING  N  N  33  
L7N  C5A  H5A1  SING  N  N  34  
L7N  O1   H2    SING  N  N  35  
L7N  O1P  H4    SING  N  N  36  
L7N  O2P  H5    SING  N  N  37  
L7N  N    H1    SING  N  N  38  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L7N  InChI             InChI                 1.03   "InChI=1S/C11H14N3O7P/c1-6-10(15)8(3-13-9-5-20-14-11(9)16)7(2-12-6)4-21-22(17,18)19/h2-3,9,15H,4-5H2,1H3,(H,14,16)(H2,17,18,19)/p+1/b13-3+/t9-/m1/s1"  
L7N  InChIKey          InChI                 1.03   PWALIMMCDFLLIJ-RZTFRGLUSA-O  
L7N  SMILES_CANONICAL  CACTVS                3.385  "Cc1ncc(CO[P](O)(O)=O)c(C=[NH+][C@@H]2CONC2=O)c1O"  
L7N  SMILES            CACTVS                3.385  "Cc1ncc(CO[P](O)(O)=O)c(C=[NH+][CH]2CONC2=O)c1O"  
L7N  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1c(c(c(cn1)COP(=O)(O)O)/C=[NH+]/[C@@H]2CONC2=O)O"  
L7N  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1c(c(c(cn1)COP(=O)(O)O)C=[NH+]C2CONC2=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          L7N
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylidene-[(4~{R})-3-oxidanylidene-1,2-oxazolidin-4-yl]azanium"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L7N  "Create component"  2019-07-26  PDBE  
L7N  "Initial release"   2020-04-01  RCSB  
##
