data_L4N
# 
_chem_comp.id                                    L4N 
_chem_comp.name                                  "(5R)-N-(4-methylpyridin-3-yl)spiro[2.4]heptane-5-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H18 N2 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-15 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        230.306 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     L4N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GC0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
L4N N1  N1  N 0 1 N N N N N N 8.883  -0.566 20.967 0.895  0.730  -0.082 N1  L4N 1  
L4N C4  C1  C 0 1 Y N N N N N 8.359  -0.122 18.614 2.231  -1.249 0.313  C4  L4N 2  
L4N C5  C2  C 0 1 Y N N N N N 8.007  -0.097 19.965 2.143  0.112  0.049  C5  L4N 3  
L4N C6  C3  C 0 1 N N N N N N 10.061 0.014  21.267 -0.181 0.006  -0.449 C6  L4N 4  
L4N C7  C4  C 0 1 N N R N N N 10.805 -0.644 22.396 -1.547 0.642  -0.467 C7  L4N 5  
L4N C8  C5  C 0 1 N N N N N N 11.511 0.369  23.319 -1.941 1.120  0.954  C8  L4N 6  
L4N C10 C6  C 0 1 N N N N N N 13.192 -0.958 22.154 -3.853 -0.074 0.032  C10 L4N 7  
L4N C13 C7  C 0 1 N N N N N N 11.841 -1.661 21.907 -2.625 -0.403 -0.828 C13 L4N 8  
L4N O   O1  O 0 1 N N N N N N 10.507 0.996  20.675 -0.049 -1.157 -0.766 O   L4N 9  
L4N C12 C8  C 0 1 N N N N N N 14.299 -1.097 21.162 -4.742 -1.181 0.590  C12 L4N 10 
L4N C11 C9  C 0 1 N N N N N N 14.401 -1.759 22.511 -5.266 -0.256 -0.511 C11 L4N 11 
L4N C9  C10 C 0 1 N N N N N N 12.971 0.414  22.836 -3.489 1.151  0.889  C9  L4N 12 
L4N C1  C11 C 0 1 Y N N N N N 6.767  0.454  20.334 3.316  0.851  -0.085 C1  L4N 13 
L4N C   C12 C 0 1 N N N N N N 6.344  0.580  21.777 3.268  2.330  -0.371 C   L4N 14 
L4N N   N2  N 0 1 Y N N N N N 7.575  0.361  17.642 3.405  -1.834 0.442  N   L4N 15 
L4N C3  C13 C 0 1 Y N N N N N 6.395  0.879  18.005 4.534  -1.161 0.326  C3  L4N 16 
L4N C2  C14 C 0 1 Y N N N N N 5.957  0.940  19.314 4.528  0.194  0.053  C2  L4N 17 
L4N H1  H1  H 0 1 N N N N N N 8.613  -1.377 21.485 0.803  1.679  0.096  H1  L4N 18 
L4N H2  H2  H 0 1 N N N N N N 9.311  -0.552 18.339 1.329  -1.832 0.419  H2  L4N 19 
L4N H3  H3  H 0 1 N N N N N N 10.072 -1.189 23.008 -1.570 1.475  -1.169 H3  L4N 20 
L4N H4  H4  H 0 1 N N N N N N 11.045 1.361  23.229 -1.600 0.410  1.708  H4  L4N 21 
L4N H5  H5  H 0 1 N N N N N N 11.462 0.035  24.366 -1.539 2.113  1.152  H5  L4N 22 
L4N H6  H6  H 0 1 N N N N N N 11.702 -1.879 20.838 -2.878 -0.329 -1.885 H6  L4N 23 
L4N H7  H7  H 0 1 N N N N N N 11.775 -2.596 22.483 -2.265 -1.406 -0.598 H7  L4N 24 
L4N H8  H8  H 0 1 N N N N N N 14.155 -1.708 20.258 -4.502 -2.207 0.314  H8  L4N 25 
L4N H9  H9  H 0 1 N N N N N N 14.936 -0.233 20.923 -5.144 -1.046 1.594  H9  L4N 26 
L4N H10 H10 H 0 1 N N N N N N 14.332 -2.854 22.594 -6.013 0.487  -0.232 H10 L4N 27 
L4N H11 H11 H 0 1 N N N N N N 15.113 -1.379 23.259 -5.371 -0.674 -1.513 H11 L4N 28 
L4N H12 H12 H 0 1 N N N N N N 13.658 0.542  23.685 -3.915 1.059  1.888  H12 L4N 29 
L4N H13 H13 H 0 1 N N N N N N 13.119 1.234  22.118 -3.832 2.068  0.409  H13 L4N 30 
L4N H14 H14 H 0 1 N N N N N N 5.786  -0.320 22.076 3.248  2.882  0.569  H14 L4N 31 
L4N H15 H15 H 0 1 N N N N N N 7.236  0.687  22.412 4.149  2.618  -0.943 H15 L4N 32 
L4N H16 H16 H 0 1 N N N N N N 5.702  1.465  21.895 2.371  2.559  -0.946 H16 L4N 33 
L4N H17 H17 H 0 1 N N N N N N 5.750  1.271  17.232 5.475  -1.678 0.438  H17 L4N 34 
L4N H18 H18 H 0 1 N N N N N N 4.990  1.363  19.544 5.457  0.737  -0.041 H18 L4N 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
L4N N   C3  DOUB Y N 1  
L4N N   C4  SING Y N 2  
L4N C3  C2  SING Y N 3  
L4N C4  C5  DOUB Y N 4  
L4N C2  C1  DOUB Y N 5  
L4N C5  C1  SING Y N 6  
L4N C5  N1  SING N N 7  
L4N C1  C   SING N N 8  
L4N O   C6  DOUB N N 9  
L4N N1  C6  SING N N 10 
L4N C12 C10 SING N N 11 
L4N C12 C11 SING N N 12 
L4N C6  C7  SING N N 13 
L4N C13 C10 SING N N 14 
L4N C13 C7  SING N N 15 
L4N C10 C11 SING N N 16 
L4N C10 C9  SING N N 17 
L4N C7  C8  SING N N 18 
L4N C9  C8  SING N N 19 
L4N N1  H1  SING N N 20 
L4N C4  H2  SING N N 21 
L4N C7  H3  SING N N 22 
L4N C8  H4  SING N N 23 
L4N C8  H5  SING N N 24 
L4N C13 H6  SING N N 25 
L4N C13 H7  SING N N 26 
L4N C12 H8  SING N N 27 
L4N C12 H9  SING N N 28 
L4N C11 H10 SING N N 29 
L4N C11 H11 SING N N 30 
L4N C9  H12 SING N N 31 
L4N C9  H13 SING N N 32 
L4N C   H14 SING N N 33 
L4N C   H15 SING N N 34 
L4N C   H16 SING N N 35 
L4N C3  H17 SING N N 36 
L4N C2  H18 SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
L4N SMILES           ACDLabs              12.01 "O=C(Nc1cnccc1C)C1CCC2(CC2)C1"                                                                                         
L4N InChI            InChI                1.06  "InChI=1S/C14H18N2O/c1-10-3-7-15-9-12(10)16-13(17)11-2-4-14(8-11)5-6-14/h3,7,9,11H,2,4-6,8H2,1H3,(H,16,17)/t11-/m1/s1" 
L4N InChIKey         InChI                1.06  FNCISWRYQRGLKF-LLVKDONJSA-N                                                                                            
L4N SMILES_CANONICAL CACTVS               3.385 "Cc1ccncc1NC(=O)[C@@H]2CCC3(CC3)C2"                                                                                    
L4N SMILES           CACTVS               3.385 "Cc1ccncc1NC(=O)[CH]2CCC3(CC3)C2"                                                                                      
L4N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)[C@@H]2CCC3(C2)CC3"                                                                                    
L4N SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)C2CCC3(C2)CC3"                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
L4N "SYSTEMATIC NAME" ACDLabs              12.01 "(5R)-N-(4-methylpyridin-3-yl)spiro[2.4]heptane-5-carboxamide"       
L4N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(6~{R})-~{N}-(4-methylpyridin-3-yl)spiro[2.4]heptane-6-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
L4N "Create component" 2023-08-15 RCSB 
L4N "Initial release"  2023-11-08 RCSB 
# 
