data_J2N
# 
_chem_comp.id                                    J2N 
_chem_comp.name                                  "(3~{S})-~{N}-(4-carbamimidoylphenyl)-2-oxidanylidene-piperidine-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H16 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-01-16 
_chem_comp.pdbx_modified_date                    2019-02-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        260.292 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     J2N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6QH9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
J2N C10 C1  C 0 1 Y N N -22.701 1.190  -23.717 -1.913 1.355  0.847  C10 J2N 1  
J2N C15 C2  C 0 1 N N N -24.050 -0.510 -20.786 1.297  -0.208 0.623  C15 J2N 2  
J2N C17 C3  C 0 1 N N S -23.658 -1.935 -20.389 2.771  0.094  0.715  C17 J2N 3  
J2N C22 C4  C 0 1 N N N -23.212 -3.650 -18.608 5.043  -0.911 0.658  C22 J2N 4  
J2N N01 N1  N 0 1 N N N -23.956 5.767  -24.593 -6.024 0.498  0.224  N01 J2N 5  
J2N C04 C5  C 0 1 N N N -23.222 4.705  -24.959 -5.062 -0.337 -0.301 C04 J2N 6  
J2N N05 N2  N 0 1 N N N -22.556 4.761  -26.070 -5.416 -1.391 -0.982 N05 J2N 7  
J2N C07 C6  C 0 1 Y N N -23.258 3.509  -24.097 -3.629 -0.038 -0.093 C07 J2N 8  
J2N C08 C7  C 0 1 Y N N -22.673 2.317  -24.519 -3.249 1.081  0.650  C08 J2N 9  
J2N C12 C8  C 0 1 Y N N -23.324 1.225  -22.472 -0.944 0.517  0.307  C12 J2N 10 
J2N N13 N3  N 0 1 N N N -23.269 -0.006 -21.770 0.409  0.799  0.504  N13 J2N 11 
J2N O16 O1  O 0 1 N N N -24.947 0.112  -20.209 0.911  -1.357 0.655  O16 J2N 12 
J2N C19 C9  C 0 1 N N N -23.906 -2.325 -18.920 3.552  -1.216 0.842  C19 J2N 13 
J2N C25 C10 C 0 1 N N N -23.679 -4.744 -19.563 5.279  -0.478 -0.790 C25 J2N 14 
J2N N28 N4  N 0 1 N N N -24.162 -4.253 -20.872 4.344  0.575  -1.166 N28 J2N 15 
J2N C30 C11 C 0 1 N N N -24.223 -2.989 -21.328 3.207  0.832  -0.518 C30 J2N 16 
J2N O31 O2  O 0 1 N N N -24.638 -2.735 -22.457 2.487  1.708  -0.948 O31 J2N 17 
J2N C32 C12 C 0 1 Y N N -23.906 2.418  -22.036 -1.319 -0.602 -0.428 C32 J2N 18 
J2N C34 C13 C 0 1 Y N N -23.879 3.543  -22.847 -2.653 -0.883 -0.624 C34 J2N 19 
J2N H1  H1  H 0 1 N N N -22.237 0.277  -24.059 -1.619 2.223  1.418  H1  J2N 20 
J2N H2  H2  H 0 1 N N N -22.567 -1.983 -20.520 2.959  0.714  1.592  H2  J2N 21 
J2N H3  H3  H 0 1 N N N -23.449 -3.947 -17.576 5.339  -0.108 1.333  H3  J2N 22 
J2N H4  H4  H 0 1 N N N -22.125 -3.521 -18.712 5.629  -1.805 0.874  H4  J2N 23 
J2N H5  H5  H 0 1 N N N -24.505 5.731  -23.758 -5.761 1.283  0.731  H5  J2N 24 
J2N H6  H6  H 0 1 N N N -23.954 6.594  -25.155 -6.964 0.302  0.087  H6  J2N 25 
J2N H7  H7  H 0 1 N N N -22.078 3.904  -26.264 -4.739 -1.979 -1.352 H7  J2N 26 
J2N H8  H8  H 0 1 N N N -22.191 2.272  -25.485 -4.002 1.732  1.070  H8  J2N 27 
J2N H9  H9  H 0 1 N N N -22.522 -0.608 -22.052 0.710  1.720  0.556  H9  J2N 28 
J2N H10 H10 H 0 1 N N N -23.505 -1.540 -18.262 3.385  -1.649 1.828  H10 J2N 29 
J2N H11 H11 H 0 1 N N N -24.987 -2.431 -18.749 3.222  -1.915 0.073  H11 J2N 30 
J2N H12 H12 H 0 1 N N N -24.499 -5.295 -19.079 6.299  -0.108 -0.893 H12 J2N 31 
J2N H13 H13 H 0 1 N N N -22.835 -5.426 -19.743 5.138  -1.334 -1.450 H13 J2N 32 
J2N H14 H14 H 0 1 N N N -24.487 -4.956 -21.504 4.563  1.123  -1.936 H14 J2N 33 
J2N H15 H15 H 0 1 N N N -24.378 2.464  -21.066 -0.564 -1.251 -0.846 H15 J2N 34 
J2N H16 H16 H 0 1 N N N -24.344 4.457  -22.507 -2.944 -1.750 -1.199 H16 J2N 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
J2N N05 C04 DOUB N N 1  
J2N C04 N01 SING N N 2  
J2N C04 C07 SING N N 3  
J2N C08 C07 DOUB Y N 4  
J2N C08 C10 SING Y N 5  
J2N C07 C34 SING Y N 6  
J2N C10 C12 DOUB Y N 7  
J2N C34 C32 DOUB Y N 8  
J2N C12 C32 SING Y N 9  
J2N C12 N13 SING N N 10 
J2N O31 C30 DOUB N N 11 
J2N N13 C15 SING N N 12 
J2N C30 N28 SING N N 13 
J2N C30 C17 SING N N 14 
J2N N28 C25 SING N N 15 
J2N C15 C17 SING N N 16 
J2N C15 O16 DOUB N N 17 
J2N C17 C19 SING N N 18 
J2N C25 C22 SING N N 19 
J2N C19 C22 SING N N 20 
J2N C10 H1  SING N N 21 
J2N C17 H2  SING N N 22 
J2N C22 H3  SING N N 23 
J2N C22 H4  SING N N 24 
J2N N01 H5  SING N N 25 
J2N N01 H6  SING N N 26 
J2N N05 H7  SING N N 27 
J2N C08 H8  SING N N 28 
J2N N13 H9  SING N N 29 
J2N C19 H10 SING N N 30 
J2N C19 H11 SING N N 31 
J2N C25 H12 SING N N 32 
J2N C25 H13 SING N N 33 
J2N N28 H14 SING N N 34 
J2N C32 H15 SING N N 35 
J2N C34 H16 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
J2N InChI            InChI                1.03  "InChI=1S/C13H16N4O2/c14-11(15)8-3-5-9(6-4-8)17-13(19)10-2-1-7-16-12(10)18/h3-6,10H,1-2,7H2,(H3,14,15)(H,16,18)(H,17,19)/t10-/m0/s1" 
J2N InChIKey         InChI                1.03  IZWNURHHAQZXMJ-JTQLQIEISA-N                                                                                                          
J2N SMILES_CANONICAL CACTVS               3.385 "NC(=N)c1ccc(NC(=O)[C@H]2CCCNC2=O)cc1"                                                                                               
J2N SMILES           CACTVS               3.385 "NC(=N)c1ccc(NC(=O)[CH]2CCCNC2=O)cc1"                                                                                                
J2N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "[H]/N=C(/c1ccc(cc1)NC(=O)[C@H]2CCCNC2=O)\N"                                                                                         
J2N SMILES           "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1C(=N)N)NC(=O)C2CCCNC2=O"                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
J2N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{S})-~{N}-(4-carbamimidoylphenyl)-2-oxidanylidene-piperidine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
J2N "Create component" 2019-01-16 EBI  
J2N "Initial release"  2019-02-06 RCSB 
# 
