data_GTN
# 
_chem_comp.id                                    GTN 
_chem_comp.name                                  "PHOSPHOAMINOPHOSPHONIC ACID GUANYLATE ESTER" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H17 N6 O13 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2008-10-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   OBS 
_chem_comp.pdbx_replaced_by                      GNP 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        522.196 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GTN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        721P 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GTN PG     PG   P 0 1 N N N 5.153  32.063 22.021 -1.231 -0.295 7.212  PG     GTN 1  
GTN N3B    N3B  N 0 1 N N N 6.749  32.123 21.582 -1.236 -1.064 5.714  N3B    GTN 2  
GTN O1G    O1G  O 0 1 N N N 4.899  32.446 23.420 -1.759 1.078  7.063  O1G    GTN 3  
GTN O2G    O2G  O 0 1 N N N 4.175  32.663 21.132 -2.158 -1.118 8.240  O2G    GTN 4  
GTN O3G    O3G  O 0 1 N N N 4.652  30.549 21.973 0.274  -0.234 7.778  O3G    GTN 5  
GTN PB     PB   P 0 1 N N R 7.308  31.872 20.024 -0.252 -0.151 4.699  PB     GTN 6  
GTN O1B    O1B  O 0 1 N N N 7.464  30.462 19.680 -0.795 1.221  4.589  O1B    GTN 7  
GTN O2B    O2B  O 0 1 N N N 6.634  32.602 18.959 1.237  -0.091 5.307  O2B    GTN 8  
GTN PA     PA   P 0 1 N N S 9.267  34.007 19.557 0.744  0.089  2.326  PA     GTN 9  
GTN O1A    O1A  O 0 1 N N N 9.418  34.078 18.100 0.185  1.458  2.252  O1A    GTN 10 
GTN O2A    O2A  O 0 1 N N N 8.529  35.074 20.303 2.216  0.145  2.974  O2A    GTN 11 
GTN O3A    O3A  O 0 1 N N N 8.773  32.489 19.980 -0.209 -0.830 3.240  O3A    GTN 12 
GTN "O5'"  O5*  O 0 1 N N N 10.745 33.961 20.117 0.832  -0.534 0.845  "O5'"  GTN 13 
GTN "C5'"  C5*  C 0 1 N N N 11.111 33.756 21.476 1.688  0.322  0.086  "C5'"  GTN 14 
GTN "C4'"  C4*  C 0 1 N N R 12.556 34.200 21.659 1.815  -0.217 -1.339 "C4'"  GTN 15 
GTN "O4'"  O4*  O 0 1 N N N 13.486 33.420 20.870 0.524  -0.237 -1.986 "O4'"  GTN 16 
GTN "C3'"  C3*  C 0 1 N N S 12.747 35.664 21.239 2.674  0.734  -2.202 "C3'"  GTN 17 
GTN "O3'"  O3*  O 0 1 N N N 13.669 36.330 22.086 4.018  0.258  -2.285 "O3'"  GTN 18 
GTN "C2'"  C2*  C 0 1 N N R 13.368 35.525 19.868 1.997  0.695  -3.592 "C2'"  GTN 19 
GTN "O2'"  O2*  O 0 1 N N N 14.109 36.694 19.511 2.904  0.196  -4.577 "O2'"  GTN 20 
GTN "C1'"  C1*  C 0 1 N N R 14.275 34.294 20.069 0.808  -0.272 -3.402 "C1'"  GTN 21 
GTN N9     N9   N 0 1 Y N N 14.437 33.559 18.803 -0.352 0.188  -4.166 N9     GTN 22 
GTN C8     C8   C 0 1 Y N N 13.459 33.105 17.932 -1.315 1.051  -3.730 C8     GTN 23 
GTN N7     N7   N 0 1 Y N N 13.902 32.453 16.903 -2.196 1.240  -4.668 N7     GTN 24 
GTN C5     C5   C 0 1 Y N N 15.283 32.503 17.073 -1.853 0.512  -5.759 C5     GTN 25 
GTN C6     C6   C 0 1 Y N N 16.300 31.944 16.305 -2.423 0.330  -7.041 C6     GTN 26 
GTN O6     O6   O 0 1 N N N 16.226 31.385 15.239 -3.453 0.902  -7.354 O6     GTN 27 
GTN N1     N1   N 0 1 Y N N 17.526 32.120 16.874 -1.794 -0.489 -7.912 N1     GTN 28 
GTN C2     C2   C 0 1 Y N N 17.789 32.816 18.030 -0.646 -1.129 -7.549 C2     GTN 29 
GTN N2     N2   N 0 1 N N N 19.080 32.988 18.341 -0.033 -1.960 -8.453 N2     GTN 30 
GTN N3     N3   N 0 1 Y N N 16.837 33.331 18.789 -0.107 -0.968 -6.361 N3     GTN 31 
GTN C4     C4   C 0 1 Y N N 15.618 33.154 18.242 -0.670 -0.168 -5.449 C4     GTN 32 
GTN H3B    H3B  H 0 1 N N N 7.248  31.471 22.186 -2.175 -0.988 5.353  H3B    GTN 33 
GTN HOG2   2HOG H 0 0 N N N 3.259  32.628 21.383 -2.127 -0.645 9.083  HOG2   GTN 34 
GTN HOG3   3HOG H 0 0 N N N 3.736  30.514 22.224 0.579  -1.147 7.860  HOG3   GTN 35 
GTN HOB2   2HOB H 0 0 N N N 6.951  32.459 18.074 1.553  -1.004 5.362  HOB2   GTN 36 
GTN HOA2   2HOA H 0 0 N N N 8.431  35.028 21.246 2.543  -0.764 3.004  HOA2   GTN 37 
GTN "H5'1" 1H5* H 0 0 N N N 10.415 34.259 22.187 2.673  0.356  0.551  "H5'1" GTN 38 
GTN "H5'2" 2H5* H 0 0 N N N 10.939 32.706 21.811 1.265  1.326  0.058  "H5'2" GTN 39 
GTN "H4'"  H4*  H 0 1 N N N 12.766 34.057 22.744 2.251  -1.216 -1.329 "H4'"  GTN 40 
GTN "H3'1" 1H3* H 0 0 N N N 11.797 36.247 21.275 2.652  1.744  -1.793 "H3'1" GTN 41 
GTN "H3'2" 2H3* H 0 0 N N N 13.787 37.236 21.826 4.505  0.889  -2.833 "H3'2" GTN 42 
GTN "H2'1" 1H2* H 0 0 N N N 12.634 35.407 19.037 1.639  1.686  -3.871 "H2'1" GTN 43 
GTN "H2'2" 2H2* H 0 0 N N N 14.499 36.606 18.649 3.651  0.810  -4.606 "H2'2" GTN 44 
GTN "H1'"  H1*  H 0 1 N N N 15.266 34.596 20.479 1.087  -1.281 -3.708 "H1'"  GTN 45 
GTN H8     H8   H 0 1 N N N 12.373 33.256 18.052 -1.341 1.509  -2.752 H8     GTN 46 
GTN H1     H1   H 0 1 N N N 18.316 31.692 16.391 -2.166 -0.630 -8.797 H1     GTN 47 
GTN H21    1H2  H 0 1 N N N 19.275 33.504 19.198 0.786  -2.419 -8.210 H21    GTN 48 
GTN H22    2H2  H 0 1 N N N 19.566 33.425 17.558 -0.421 -2.092 -9.332 H22    GTN 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GTN PG    N3B    SING N N 1  
GTN PG    O1G    DOUB N N 2  
GTN PG    O2G    SING N N 3  
GTN PG    O3G    SING N N 4  
GTN N3B   PB     SING N N 5  
GTN N3B   H3B    SING N N 6  
GTN O2G   HOG2   SING N N 7  
GTN O3G   HOG3   SING N N 8  
GTN PB    O1B    DOUB N N 9  
GTN PB    O2B    SING N N 10 
GTN PB    O3A    SING N N 11 
GTN O2B   HOB2   SING N N 12 
GTN PA    O1A    DOUB N N 13 
GTN PA    O2A    SING N N 14 
GTN PA    O3A    SING N N 15 
GTN PA    "O5'"  SING N N 16 
GTN O2A   HOA2   SING N N 17 
GTN "O5'" "C5'"  SING N N 18 
GTN "C5'" "C4'"  SING N N 19 
GTN "C5'" "H5'1" SING N N 20 
GTN "C5'" "H5'2" SING N N 21 
GTN "C4'" "O4'"  SING N N 22 
GTN "C4'" "C3'"  SING N N 23 
GTN "C4'" "H4'"  SING N N 24 
GTN "O4'" "C1'"  SING N N 25 
GTN "C3'" "O3'"  SING N N 26 
GTN "C3'" "C2'"  SING N N 27 
GTN "C3'" "H3'1" SING N N 28 
GTN "O3'" "H3'2" SING N N 29 
GTN "C2'" "O2'"  SING N N 30 
GTN "C2'" "C1'"  SING N N 31 
GTN "C2'" "H2'1" SING N N 32 
GTN "O2'" "H2'2" SING N N 33 
GTN "C1'" N9     SING N N 34 
GTN "C1'" "H1'"  SING N N 35 
GTN N9    C8     SING Y N 36 
GTN N9    C4     SING Y N 37 
GTN C8    N7     DOUB Y N 38 
GTN C8    H8     SING N N 39 
GTN N7    C5     SING Y N 40 
GTN C5    C6     SING Y N 41 
GTN C5    C4     DOUB Y N 42 
GTN C6    O6     DOUB N N 43 
GTN C6    N1     SING Y N 44 
GTN N1    C2     SING Y N 45 
GTN N1    H1     SING N N 46 
GTN C2    N2     SING N N 47 
GTN C2    N3     DOUB Y N 48 
GTN N2    H21    SING N N 49 
GTN N2    H22    SING N N 50 
GTN N3    C4     SING Y N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GTN SMILES           ACDLabs              10.04 "O=P(O)(O)NP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O" 
GTN InChI            InChI                1.02b 
"InChI=1/C10H17N6O13P3/c11-10-13-7-4(8(19)14-10)12-2-16(7)9-6(18)5(17)3(28-9)1-27-32(25,26)29-31(23,24)15-30(20,21)22/h2-3,5-6,9,17-18H,1H2,(H,25,26)(H3,11,13,14,19)(H4,15,20,21,22,23,24)/t3-,5-,6-,9-/m1/s1/f/h14-15,20-21,23,25H,11H2" 
GTN InChIKey         InChI                1.02b UQABYHGXWYXDTK-SADWDOFADT 
GTN SMILES_CANONICAL CACTVS               3.341 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)N[P](O)(O)=O)[C@@H](O)[C@H]3O" 
GTN SMILES           CACTVS               3.341 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)N[P](O)(O)=O)[CH](O)[CH]3O" 
GTN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(NP(=O)(O)O)O)O)O)N=C(NC2=O)N" 
GTN SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(NP(=O)(O)O)O)O)O)N=C(NC2=O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GTN "SYSTEMATIC NAME" ACDLabs              10.04 "5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]guanosine"                                                                   
GTN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[[[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]amino]phosphonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GTN "Create component" 1999-07-08 EBI 
# 
