data_G9N
# 
_chem_comp.id                                    G9N 
_chem_comp.name                                  "(2~{S})-2-[2-chloranylethanoyl-(3-chloranyl-4-methoxy-phenyl)amino]-~{N}-(2-phenylethyl)-2-thiophen-2-yl-ethanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H22 Cl2 N2 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-09-07 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        477.403 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     G9N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6HKQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
G9N C4  C1  C  0 1 Y N N N N N -25.131 12.385 1.196  -5.907 0.639  -0.223 C4  G9N 1  
G9N C5  C2  C  0 1 Y N N N N N -24.627 11.948 -0.026 -7.053 1.150  0.356  C5  G9N 2  
G9N C6  C3  C  0 1 Y N N N N N -23.292 12.191 -0.366 -7.724 0.421  1.321  C6  G9N 3  
G9N C7  C4  C  0 1 N N N N N N -24.844 13.571 3.412  -4.186 -1.160 -0.476 C7  G9N 4  
G9N C8  C5  C  0 1 N N N N N N -24.121 12.905 4.584  -2.961 -0.725 0.331  C8  G9N 5  
G9N C10 C6  C  0 1 N N N N N N -23.828 10.450 4.417  -0.543 -1.014 0.255  C10 G9N 6  
G9N C17 C7  C  0 1 Y N N N N N -27.812 8.200  5.910  0.467  -1.301 -4.098 C17 G9N 7  
G9N C20 C8  C  0 1 N N N N N N -21.441 6.552  3.142  2.549  -3.399 0.763  C20 G9N 8  
G9N C24 C9  C  0 1 Y N N N N N -24.210 8.621  1.580  3.236  0.817  1.016  C24 G9N 9  
G9N C26 C10 C  0 1 Y N N N N N -25.927 7.374  0.397  2.417  3.055  0.752  C26 G9N 10 
G9N C28 C11 C  0 1 Y N N N N N -25.290 6.759  2.662  1.061  1.199  0.065  C28 G9N 11 
G9N C31 C12 C  0 1 N N N N N N -26.485 7.824  -1.904 3.827  4.833  1.465  C31 G9N 12 
G9N O30 O1  O  0 1 N N N N N N -26.740 7.084  -0.684 2.593  4.396  0.892  O30 G9N 13 
G9N C27 C13 C  0 1 Y N N N N N -26.061 6.563  1.520  1.241  2.562  0.203  C27 G9N 14 
G9N CL  CL1 CL 0 0 N N N N N N -27.220 5.286  1.481  -0.005 3.659  -0.306 CL  G9N 15 
G9N C25 C14 C  0 1 Y N N N N N -24.984 8.409  0.431  3.413  2.180  1.158  C25 G9N 16 
G9N C23 C15 C  0 1 Y N N N N N -24.344 7.788  2.700  2.060  0.323  0.467  C23 G9N 17 
G9N N13 N1  N  0 1 N N N N N N -23.614 8.008  3.820  1.882  -1.058 0.318  N13 G9N 18 
G9N C19 C16 C  0 1 N N N N N N -22.357 7.457  4.077  2.797  -1.913 0.818  C19 G9N 19 
G9N O22 O2  O  0 1 N N N N N N -21.874 7.761  5.169  3.819  -1.487 1.313  O22 G9N 20 
G9N C11 C17 C  0 1 N N S N N N -24.279 8.988  4.784  0.703  -1.574 -0.381 C11 G9N 21 
G9N C14 C18 C  0 1 Y N N N N N -25.834 8.864  4.998  0.757  -1.160 -1.829 C14 G9N 22 
G9N C18 C19 C  0 1 Y N N N N N -26.462 8.150  5.968  0.312  -1.889 -2.854 C18 G9N 23 
G9N C16 C20 C  0 1 Y N N N N N -28.347 8.977  4.946  1.042  -0.098 -4.083 C16 G9N 24 
G9N S15 S1  S  0 1 Y N N N N N -27.039 9.628  4.058  1.424  0.353  -2.427 S15 G9N 25 
G9N O12 O3  O  0 1 N N N N N N -22.806 10.626 3.758  -0.460 -0.335 1.256  O12 G9N 26 
G9N N9  N2  N  0 1 N N N N N N -24.551 11.498 4.844  -1.750 -1.269 -0.287 N9  G9N 27 
G9N C3  C21 C  0 1 Y N N N N N -24.295 13.085 2.074  -5.432 -0.601 0.161  C3  G9N 28 
G9N C2  C22 C  0 1 Y N N N N N -22.963 13.343 1.733  -6.100 -1.327 1.129  C2  G9N 29 
G9N C1  C23 C  0 1 Y N N N N N -22.461 12.894 0.508  -7.249 -0.819 1.705  C1  G9N 30 
G9N H1  H1  H  0 1 N N N N N N -26.158 12.186 1.464  -5.385 1.207  -0.979 H1  G9N 31 
G9N H2  H2  H  0 1 N N N N N N -25.269 11.419 -0.714 -7.425 2.119  0.057  H2  G9N 32 
G9N H3  H3  H  0 1 N N N N N N -22.903 11.833 -1.308 -8.619 0.821  1.774  H3  G9N 33 
G9N H4  H4  H  0 1 N N N N N N -24.709 14.661 3.480  -4.100 -0.787 -1.496 H4  G9N 34 
G9N H5  H5  H  0 1 N N N N N N -25.916 13.330 3.468  -4.243 -2.249 -0.491 H5  G9N 35 
G9N H6  H6  H  0 1 N N N N N N -23.042 12.903 4.368  -2.904 0.363  0.347  H6  G9N 36 
G9N H7  H7  H  0 1 N N N N N N -24.312 13.498 5.490  -3.047 -1.099 1.352  H7  G9N 37 
G9N H8  H8  H  0 1 N N N N N N -28.431 7.646  6.601  0.150  -1.783 -5.011 H8  G9N 38 
G9N H9  H9  H  0 1 N N N N N N -21.556 5.459  3.190  1.593  -3.626 1.235  H9  G9N 39 
G9N H10 H10 H  0 1 N N N N N N -21.289 6.859  2.097  2.526  -3.725 -0.277 H10 G9N 40 
G9N H12 H12 H  0 1 N N N N N N -23.502 9.436  1.603  4.014  0.136  1.328  H12 G9N 41 
G9N H13 H13 H  0 1 N N N N N N -25.422 6.116  3.519  0.146  0.816  -0.362 H13 G9N 42 
G9N H14 H14 H  0 1 N N N N N N -27.193 7.504  -2.683 3.929  4.418  2.467  H14 G9N 43 
G9N H15 H15 H  0 1 N N N N N N -26.612 8.900  -1.713 4.656  4.492  0.845  H15 G9N 44 
G9N H16 H16 H  0 1 N N N N N N -25.456 7.630  -2.242 3.837  5.921  1.519  H16 G9N 45 
G9N H17 H17 H  0 1 N N N N N N -24.853 9.046  -0.431 4.328  2.563  1.584  H17 G9N 46 
G9N H18 H18 H  0 1 N N N N N N -23.834 8.786  5.769  0.688  -2.662 -0.315 H18 G9N 47 
G9N H19 H19 H  0 1 N N N N N N -25.928 7.590  6.722  -0.136 -2.863 -2.724 H19 G9N 48 
G9N H20 H20 H  0 1 N N N N N N -29.398 9.154  4.769  1.243  0.507  -4.956 H20 G9N 49 
G9N H21 H21 H  0 1 N N N N N N -25.398 11.333 5.349  -1.817 -1.813 -1.088 H21 G9N 50 
G9N H22 H22 H  0 1 N N N N N N -22.325 13.887 2.414  -5.728 -2.296 1.429  H22 G9N 51 
G9N H23 H23 H  0 1 N N N N N N -21.434 13.090 0.239  -7.773 -1.388 2.458  H23 G9N 52 
G9N CL1 CL2 CL 0 0 N Y N N N N -19.936 7.858  5.183  3.871  -4.261 1.634  CL1 G9N 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
G9N C31 O30 SING N N 1  
G9N O30 C26 SING N N 2  
G9N C6  C5  DOUB Y N 3  
G9N C6  C1  SING Y N 4  
G9N C5  C4  SING Y N 5  
G9N C26 C25 DOUB Y N 6  
G9N C26 C27 SING Y N 7  
G9N C25 C24 SING Y N 8  
G9N C1  C2  DOUB Y N 9  
G9N C4  C3  DOUB Y N 10 
G9N CL  C27 SING N N 11 
G9N C27 C28 DOUB Y N 12 
G9N C24 C23 DOUB Y N 13 
G9N C2  C3  SING Y N 14 
G9N C3  C7  SING N N 15 
G9N C28 C23 SING Y N 16 
G9N C23 N13 SING N N 17 
G9N C20 C19 SING N N 18 
G9N C7  C8  SING N N 19 
G9N O12 C10 DOUB N N 20 
G9N N13 C19 SING N N 21 
G9N N13 C11 SING N N 22 
G9N S15 C16 SING Y N 23 
G9N S15 C14 SING Y N 24 
G9N C19 O22 DOUB N N 25 
G9N C10 C11 SING N N 26 
G9N C10 N9  SING N N 27 
G9N C8  N9  SING N N 28 
G9N C11 C14 SING N N 29 
G9N C16 C17 DOUB Y N 30 
G9N C14 C18 DOUB Y N 31 
G9N C17 C18 SING Y N 32 
G9N C4  H1  SING N N 33 
G9N C5  H2  SING N N 34 
G9N C6  H3  SING N N 35 
G9N C7  H4  SING N N 36 
G9N C7  H5  SING N N 37 
G9N C8  H6  SING N N 38 
G9N C8  H7  SING N N 39 
G9N C17 H8  SING N N 40 
G9N C20 H9  SING N N 41 
G9N C20 H10 SING N N 42 
G9N C24 H12 SING N N 43 
G9N C28 H13 SING N N 44 
G9N C31 H14 SING N N 45 
G9N C31 H15 SING N N 46 
G9N C31 H16 SING N N 47 
G9N C25 H17 SING N N 48 
G9N C11 H18 SING N N 49 
G9N C18 H19 SING N N 50 
G9N C16 H20 SING N N 51 
G9N N9  H21 SING N N 52 
G9N C2  H22 SING N N 53 
G9N C1  H23 SING N N 54 
G9N C20 CL1 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
G9N InChI            InChI                1.03  "InChI=1S/C23H22Cl2N2O3S/c1-30-19-10-9-17(14-18(19)25)27(21(28)15-24)22(20-8-5-13-31-20)23(29)26-12-11-16-6-3-2-4-7-16/h2-10,13-14,22H,11-12,15H2,1H3,(H,26,29)/t22-/m1/s1" 
G9N InChIKey         InChI                1.03  UNVKYJSNMVDZJE-JOCHJYFZSA-N                                                                                                                                                 
G9N SMILES_CANONICAL CACTVS               3.385 "COc1ccc(cc1Cl)N([C@@H](C(=O)NCCc2ccccc2)c3sccc3)C(=O)CCl"                                                                                                                  
G9N SMILES           CACTVS               3.385 "COc1ccc(cc1Cl)N([CH](C(=O)NCCc2ccccc2)c3sccc3)C(=O)CCl"                                                                                                                    
G9N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "COc1ccc(cc1Cl)N([C@H](c2cccs2)C(=O)NCCc3ccccc3)C(=O)CCl"                                                                                                                   
G9N SMILES           "OpenEye OEToolkits" 2.0.6 "COc1ccc(cc1Cl)N(C(c2cccs2)C(=O)NCCc3ccccc3)C(=O)CCl"                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           G9N 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-[2-chloranylethanoyl-(3-chloranyl-4-methoxy-phenyl)amino]-~{N}-(2-phenylethyl)-2-thiophen-2-yl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
G9N "Create component" 2018-09-07 EBI  
G9N "Initial release"  2020-04-01 RCSB 
G9N "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            G9N 
_pdbx_chem_comp_pcm.modified_residue_id                SEC 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C20 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SE 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
