data_G4N
# 
_chem_comp.id                                    G4N 
_chem_comp.name                                  "~{N}-[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]-3-(propanoylamino)benzamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C36 H35 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-08-28 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        585.695 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     G4N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6HHI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
G4N CAQ C1  C 0 1 Y N N N N N -5.924 1.795  -16.254 5.458   -2.315 -2.152 CAQ G4N 1  
G4N CBB C2  C 0 1 Y N N N N N -7.260 2.179  -16.255 4.599   -3.111 -2.882 CBB G4N 2  
G4N CBD C3  C 0 1 Y N N N N N -8.043 1.993  -15.123 3.272   -3.225 -2.507 CBD G4N 3  
G4N CBE C4  C 0 1 Y N N N N N -7.494 1.421  -13.982 2.798   -2.543 -1.401 CBE G4N 4  
G4N CAZ C5  C 0 1 Y N N N N N -6.163 1.031  -13.986 3.648   -1.745 -0.663 CAZ G4N 5  
G4N CBG C6  C 0 1 Y N N N N N -5.367 1.230  -15.116 4.986   -1.625 -1.035 CBG G4N 6  
G4N CBH C7  C 0 1 Y N N N N N -4.023 0.850  -15.124 5.905   -0.774 -0.244 CBH G4N 7  
G4N CBI C8  C 0 1 Y N N N N N -3.603 0.013  -16.150 7.133   -1.273 0.184  CBI G4N 8  
G4N CBQ C9  C 0 1 Y N N N N N -2.278 -0.394 -16.192 7.960   -0.429 0.926  CBQ G4N 9  
G4N CBR C10 C 0 1 N N N N N N -1.816 -1.236 -17.201 9.270   -0.864 1.419  CBR G4N 10 
G4N OBK O1  O 0 1 N N N N N N -2.569 -1.645 -18.086 9.671   -1.991 1.188  OBK G4N 11 
G4N NBN N1  N 0 1 N N N N N N -0.469 -1.622 -17.208 10.025  -0.004 2.131  NBN G4N 12 
G4N CBO C11 C 0 1 N N N N N N 0.364  -1.201 -16.273 9.611   1.265  2.410  CBO G4N 13 
G4N CBJ C12 C 0 1 N N N N N N -0.073 -0.362 -15.257 8.427   1.746  1.997  CBJ G4N 14 
G4N CBP C13 C 0 1 Y N N N N N -1.400 0.046  -15.213 7.532   0.890  1.217  CBP G4N 15 
G4N NBL N2  N 0 1 Y N N N N N -1.823 0.855  -14.231 6.352   1.324  0.789  NBL G4N 16 
G4N CBM C14 C 0 1 Y N N N N N -3.097 1.273  -14.153 5.548   0.551  0.078  CBM G4N 17 
G4N CBF C15 C 0 1 Y N N N N N -3.431 2.128  -13.096 4.246   1.084  -0.383 CBF G4N 18 
G4N CBA C16 C 0 1 Y N N N N N -4.004 3.371  -13.360 3.723   0.689  -1.613 CBA G4N 19 
G4N CAR C17 C 0 1 Y N N N N N -4.346 4.229  -12.327 2.509   1.190  -2.037 CAR G4N 20 
G4N CAX C18 C 0 1 Y N N N N N -3.173 1.765  -11.777 3.534   1.980  0.416  CAX G4N 21 
G4N CAY C19 C 0 1 Y N N N N N -3.509 2.627  -10.738 2.321   2.474  -0.019 CAY G4N 22 
G4N CBC C20 C 0 1 Y N N N N N -4.089 3.861  -11.015 1.811   2.083  -1.243 CBC G4N 23 
G4N CAW C21 C 0 1 N N N N N N -4.442 4.738  -9.996  0.486   2.626  -1.712 CAW G4N 24 
G4N NAV N3  N 0 1 N N N N N N -3.343 5.043  -9.075  -0.596  1.747  -1.249 NAV G4N 25 
G4N CAU C22 C 0 1 N N N N N N -2.380 5.942  -9.729  -0.702  1.769  0.215  CAU G4N 26 
G4N CAT C23 C 0 1 N N N N N N -1.291 6.386  -8.756  -1.736  0.737  0.669  CAT G4N 27 
G4N CAO C24 C 0 1 N N N N N N -3.957 5.705  -7.917  -1.873  2.107  -1.880 CAO G4N 28 
G4N CAP C25 C 0 1 N N N N N N -2.919 6.112  -6.900  -2.942  1.084  -1.488 CAP G4N 29 
G4N CAS C26 C 0 1 N N N N N N -1.964 7.078  -7.570  -3.091  1.066  0.035  CAS G4N 30 
G4N NAN N4  N 0 1 N N N N N N -0.978 7.589  -6.603  -4.072  0.048  0.420  NAN G4N 31 
G4N CAM C27 C 0 1 N N N N N N -0.100 6.838  -5.920  -5.385  0.348  0.431  CAM G4N 32 
G4N OAL O2  O 0 1 N N N N N N 0.010  5.615  -6.005  -5.757  1.464  0.122  OAL G4N 33 
G4N CAK C28 C 0 1 Y N N N N N 0.718  7.575  -5.073  -6.375  -0.679 0.819  CAK G4N 34 
G4N CAJ C29 C 0 1 Y N N N N N 0.561  8.954  -5.008  -7.735  -0.371 0.831  CAJ G4N 35 
G4N CAC C30 C 0 1 Y N N N N N 1.688  6.950  -4.299  -5.952  -1.963 1.168  CAC G4N 36 
G4N CAD C31 C 0 1 Y N N N N N 2.494  7.710  -3.459  -6.878  -2.921 1.529  CAD G4N 37 
G4N CAH C32 C 0 1 Y N N N N N 2.337  9.089  -3.394  -8.226  -2.614 1.546  CAH G4N 38 
G4N CAI C33 C 0 1 Y N N N N N 1.365  9.710  -4.167  -8.658  -1.340 1.195  CAI G4N 39 
G4N NAB N5  N 0 1 N N N N N N 1.200  11.029 -4.129  -10.024 -1.036 1.210  NAB G4N 40 
G4N CAA C34 C 0 1 N N N N N N 1.804  11.712 -5.110  -10.530 -0.165 0.315  CAA G4N 41 
G4N OAE O3  O 0 1 N N N N N N 2.482  11.182 -5.983  -9.822  0.282  -0.563 OAE G4N 42 
G4N CAF C35 C 0 1 N N N N N N 1.623  13.224 -5.098  -11.974 0.254  0.404  CAF G4N 43 
G4N CAG C36 C 0 1 N N N N N N 2.331  13.948 -6.242  -12.290 1.240  -0.722 CAG G4N 44 
G4N H1  H1  H 0 1 N N N N N N -5.320 1.936  -17.138 6.495   -2.229 -2.442 H1  G4N 45 
G4N H2  H2  H 0 1 N N N N N N -7.691 2.624  -17.140 4.963   -3.645 -3.747 H2  G4N 46 
G4N H3  H3  H 0 1 N N N N N N -9.080 2.293  -15.130 2.603   -3.849 -3.082 H3  G4N 47 
G4N H4  H4  H 0 1 N N N N N N -8.099 1.281  -13.099 1.761   -2.636 -1.114 H4  G4N 48 
G4N H5  H5  H 0 1 N N N N N N -5.738 0.569  -13.107 3.277   -1.212 0.200  H5  G4N 49 
G4N H6  H6  H 0 1 N N N N N N -4.300 -0.317 -16.906 7.436   -2.282 -0.051 H6  G4N 50 
G4N H7  H7  H 0 1 N N N N N N 1.398  -1.513 -16.299 10.261  1.908  2.985  H7  G4N 51 
G4N H8  H8  H 0 1 N N N N N N 0.620  -0.026 -14.500 8.136   2.758  2.240  H8  G4N 52 
G4N H10 H10 H 0 1 N N N N N N -4.184 3.669  -14.382 4.267   -0.007 -2.234 H10 G4N 53 
G4N H11 H11 H 0 1 N N N N N N -4.811 5.180  -12.543 2.102   0.884  -2.990 H11 G4N 54 
G4N H12 H12 H 0 1 N N N N N N -2.711 0.813  -11.560 3.932   2.286  1.372  H12 G4N 55 
G4N H13 H13 H 0 1 N N N N N N -3.319 2.338  -9.715  1.770   3.167  0.599  H13 G4N 56 
G4N H14 H14 H 0 1 N N N N N N -4.785 5.679  -10.451 0.340   3.627  -1.306 H14 G4N 57 
G4N H15 H15 H 0 1 N N N N N N -5.264 4.288  -9.419  0.476   2.671  -2.802 H15 G4N 58 
G4N H17 H17 H 0 1 N N N N N N -1.913 5.414  -10.574 0.267   1.529  0.653  H17 G4N 59 
G4N H18 H18 H 0 1 N N N N N N -2.913 6.830  -10.101 -1.012  2.762  0.542  H18 G4N 60 
G4N H19 H19 H 0 1 N N N N N N -0.726 5.510  -8.405  -1.420  -0.258 0.354  H19 G4N 61 
G4N H20 H20 H 0 1 N N N N N N -0.607 7.087  -9.257  -1.826  0.765  1.755  H20 G4N 62 
G4N H21 H21 H 0 1 N N N N N N -4.493 6.602  -8.260  -2.177  3.098  -1.543 H21 G4N 63 
G4N H22 H22 H 0 1 N N N N N N -4.668 5.012  -7.444  -1.754  2.112  -2.963 H22 G4N 64 
G4N H23 H23 H 0 1 N N N N N N -3.406 6.602  -6.044  -3.893  1.360  -1.944 H23 G4N 65 
G4N H24 H24 H 0 1 N N N N N N -2.370 5.225  -6.551  -2.645  0.095  -1.837 H24 G4N 66 
G4N H25 H25 H 0 1 N N N N N N -2.549 7.925  -7.958  -3.426  2.045  0.380  H25 G4N 67 
G4N H26 H26 H 0 1 N N N N N N -0.961 8.576  -6.442  -3.775  -0.842 0.666  H26 G4N 68 
G4N H27 H27 H 0 1 N N N N N N -0.190 9.439  -5.614  -8.069  0.619  0.558  H27 G4N 69 
G4N H28 H28 H 0 1 N N N N N N 1.815  5.879  -4.350  -4.900  -2.207 1.155  H28 G4N 70 
G4N H29 H29 H 0 1 N N N N N N 3.246  7.226  -2.854  -6.548  -3.913 1.799  H29 G4N 71 
G4N H30 H30 H 0 1 N N N N N N 2.969  9.676  -2.744  -8.946  -3.367 1.829  H30 G4N 72 
G4N H31 H31 H 0 1 N N N N N N 0.662  11.480 -3.417  -10.606 -1.452 1.865  H31 G4N 73 
G4N H32 H32 H 0 1 N N N N N N 2.018  13.611 -4.147  -12.614 -0.624 0.308  H32 G4N 74 
G4N H33 H33 H 0 1 N N N N N N 0.547  13.443 -5.164  -12.155 0.731  1.367  H33 G4N 75 
G4N H34 H34 H 0 1 N N N N N N 2.150  15.030 -6.159  -11.651 2.118  -0.626 H34 G4N 76 
G4N H35 H35 H 0 1 N N N N N N 3.412  13.752 -6.187  -12.109 0.763  -1.685 H35 G4N 77 
G4N H36 H36 H 0 1 N N N N N N 1.941  13.584 -7.204  -13.335 1.543  -0.657 H36 G4N 78 
G4N H37 H37 H 0 1 N N N N N N -0.133 -2.225 -17.932 10.891  -0.297 2.455  H37 G4N 79 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
G4N OBK CBR DOUB N N 1  
G4N NBN CBR SING N N 2  
G4N NBN CBO SING N N 3  
G4N CBR CBQ SING N N 4  
G4N CBO CBJ DOUB N N 5  
G4N CBB CAQ DOUB Y N 6  
G4N CBB CBD SING Y N 7  
G4N CAQ CBG SING Y N 8  
G4N CBQ CBI DOUB Y N 9  
G4N CBQ CBP SING Y N 10 
G4N CBI CBH SING Y N 11 
G4N CBJ CBP SING N N 12 
G4N CBP NBL DOUB Y N 13 
G4N CBH CBG SING N N 14 
G4N CBH CBM DOUB Y N 15 
G4N CBD CBE DOUB Y N 16 
G4N CBG CAZ DOUB Y N 17 
G4N NBL CBM SING Y N 18 
G4N CBM CBF SING N N 19 
G4N CAZ CBE SING Y N 20 
G4N CBA CBF DOUB Y N 21 
G4N CBA CAR SING Y N 22 
G4N CBF CAX SING Y N 23 
G4N CAR CBC DOUB Y N 24 
G4N CAX CAY DOUB Y N 25 
G4N CBC CAY SING Y N 26 
G4N CBC CAW SING N N 27 
G4N CAW NAV SING N N 28 
G4N CAU NAV SING N N 29 
G4N CAU CAT SING N N 30 
G4N NAV CAO SING N N 31 
G4N CAT CAS SING N N 32 
G4N CAO CAP SING N N 33 
G4N CAS CAP SING N N 34 
G4N CAS NAN SING N N 35 
G4N NAN CAM SING N N 36 
G4N CAG CAF SING N N 37 
G4N OAL CAM DOUB N N 38 
G4N OAE CAA DOUB N N 39 
G4N CAM CAK SING N N 40 
G4N CAA CAF SING N N 41 
G4N CAA NAB SING N N 42 
G4N CAK CAJ DOUB Y N 43 
G4N CAK CAC SING Y N 44 
G4N CAJ CAI SING Y N 45 
G4N CAC CAD DOUB Y N 46 
G4N CAI NAB SING N N 47 
G4N CAI CAH DOUB Y N 48 
G4N CAD CAH SING Y N 49 
G4N CAQ H1  SING N N 50 
G4N CBB H2  SING N N 51 
G4N CBD H3  SING N N 52 
G4N CBE H4  SING N N 53 
G4N CAZ H5  SING N N 54 
G4N CBI H6  SING N N 55 
G4N CBO H7  SING N N 56 
G4N CBJ H8  SING N N 57 
G4N CBA H10 SING N N 58 
G4N CAR H11 SING N N 59 
G4N CAX H12 SING N N 60 
G4N CAY H13 SING N N 61 
G4N CAW H14 SING N N 62 
G4N CAW H15 SING N N 63 
G4N CAU H17 SING N N 64 
G4N CAU H18 SING N N 65 
G4N CAT H19 SING N N 66 
G4N CAT H20 SING N N 67 
G4N CAO H21 SING N N 68 
G4N CAO H22 SING N N 69 
G4N CAP H23 SING N N 70 
G4N CAP H24 SING N N 71 
G4N CAS H25 SING N N 72 
G4N NAN H26 SING N N 73 
G4N CAJ H27 SING N N 74 
G4N CAC H28 SING N N 75 
G4N CAD H29 SING N N 76 
G4N CAH H30 SING N N 77 
G4N NAB H31 SING N N 78 
G4N CAF H32 SING N N 79 
G4N CAF H33 SING N N 80 
G4N CAG H34 SING N N 81 
G4N CAG H35 SING N N 82 
G4N CAG H36 SING N N 83 
G4N NBN H37 SING N N 84 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
G4N InChI            InChI                1.03  "InChI=1S/C36H35N5O3/c1-2-33(42)38-29-10-6-9-27(21-29)35(43)39-28-16-19-41(20-17-28)23-24-11-13-26(14-12-24)34-30(25-7-4-3-5-8-25)22-31-32(40-34)15-18-37-36(31)44/h3-15,18,21-22,28H,2,16-17,19-20,23H2,1H3,(H,37,44)(H,38,42)(H,39,43)" 
G4N InChIKey         InChI                1.03  IWMRYSJODDURNY-UHFFFAOYSA-N                                                                                                                                                                                                               
G4N SMILES_CANONICAL CACTVS               3.385 "CCC(=O)Nc1cccc(c1)C(=O)NC2CCN(CC2)Cc3ccc(cc3)c4nc5C=CNC(=O)c5cc4c6ccccc6"                                                                                                                                                                
G4N SMILES           CACTVS               3.385 "CCC(=O)Nc1cccc(c1)C(=O)NC2CCN(CC2)Cc3ccc(cc3)c4nc5C=CNC(=O)c5cc4c6ccccc6"                                                                                                                                                                
G4N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCC(=O)Nc1cccc(c1)C(=O)NC2CCN(CC2)Cc3ccc(cc3)c4c(cc5c(n4)C=CNC5=O)c6ccccc6"                                                                                                                                                              
G4N SMILES           "OpenEye OEToolkits" 2.0.6 "CCC(=O)Nc1cccc(c1)C(=O)NC2CCN(CC2)Cc3ccc(cc3)c4c(cc5c(n4)C=CNC5=O)c6ccccc6"                                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           G4N 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "~{N}-[1-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperidin-4-yl]-3-(propanoylamino)benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
G4N "Create component" 2018-08-28 EBI  
G4N "Initial release"  2019-02-20 RCSB 
G4N "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            G4N 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CAG 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
