data_BYN
# 
_chem_comp.id                                    BYN 
_chem_comp.name                                  "hydroxylated prenyl-FMN" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H31 N4 O10 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-11-01 
_chem_comp.pdbx_modified_date                    2017-12-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        542.476 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     BYN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6EV9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
BYN C1  C1  C 0 1 N N N 22.660 11.615 26.844 2.009  -4.081 -0.844 C1  BYN 1  
BYN N1  N1  N 0 1 N N N 22.278 12.877 26.585 3.090  -4.068 -0.023 N1  BYN 2  
BYN C2  C2  C 0 1 N N N 21.635 13.197 25.414 3.596  -2.895 0.423  C2  BYN 3  
BYN C3  C3  C 0 1 N N N 21.366 12.112 24.530 2.933  -1.711 0.094  C3  BYN 4  
BYN C4  C4  C 0 1 N N N 21.828 10.838 24.877 1.807  -1.788 -0.721 C4  BYN 5  
BYN N2  N2  N 0 1 N N N 22.436 10.598 26.061 1.378  -2.974 -1.161 N2  BYN 6  
BYN N3  N3  N 0 1 N N N 20.702 12.286 23.306 3.349  -0.447 0.545  N3  BYN 7  
BYN C5  C5  C 0 1 Y N N 20.860 11.286 22.328 2.941  0.713  -0.138 C5  BYN 8  
BYN C6  C6  C 0 1 Y N N 21.279 10.004 22.684 1.819  0.612  -0.965 C6  BYN 9  
BYN N4  N4  N 0 1 N N N 21.617 9.759  24.012 1.153  -0.618 -1.080 N4  BYN 10 
BYN C7  C7  C 0 1 Y N N 20.509 11.570 20.991 3.631  1.913  0.011  C7  BYN 11 
BYN C8  C8  C 0 1 Y N N 20.620 10.579 20.022 3.129  3.030  -0.637 C8  BYN 12 
BYN C9  C9  C 0 1 Y N N 21.067 9.295  20.353 2.022  2.929  -1.469 C9  BYN 13 
BYN C10 C10 C 0 1 Y N N 21.401 8.994  21.671 1.370  1.725  -1.648 C10 BYN 14 
BYN C11 C11 C 0 1 N N R 19.724 13.411 23.164 4.178  -0.276 1.741  C11 BYN 15 
BYN C12 C12 C 0 1 N N N 19.030 13.360 21.809 5.362  0.582  1.301  C12 BYN 16 
BYN C13 C13 C 0 1 N N N 20.045 13.004 20.712 4.888  1.964  0.837  C13 BYN 17 
BYN O1  O1  O 0 1 N N N 23.258 11.465 28.034 1.565  -5.258 -1.334 O1  BYN 18 
BYN C14 C14 C 0 1 N N N 21.160 8.231  19.290 1.528  4.163  -2.184 C14 BYN 19 
BYN C15 C15 C 0 1 N N N 20.250 10.921 18.604 3.686  4.425  -0.480 C15 BYN 20 
BYN O2  O2  O 0 1 N N N 18.710 13.366 24.191 3.425  0.358  2.774  O2  BYN 21 
BYN C16 C16 C 0 1 N N N 19.396 13.188 19.337 4.705  2.854  2.067  C16 BYN 22 
BYN C17 C17 C 0 1 N N N 21.238 13.964 20.795 6.044  2.526  -0.013 C17 BYN 23 
BYN C18 C18 C 0 1 N N N 21.729 8.396  24.525 -0.229 -0.687 -1.561 C18 BYN 24 
BYN O3  O3  O 0 1 N N N 21.331 14.381 25.231 4.626  -2.900 1.079  O3  BYN 25 
BYN C19 C19 C 0 1 N N S 23.171 7.958  24.781 -1.188 -0.435 -0.396 C19 BYN 26 
BYN C20 C20 C 0 1 N N S 23.177 6.519  25.303 -2.618 -0.324 -0.929 C20 BYN 27 
BYN C21 C21 C 0 1 N N R 24.573 5.905  25.440 -3.578 -0.072 0.236  C21 BYN 28 
BYN C22 C22 C 0 1 N N N 25.549 6.792  26.171 -5.008 0.040  -0.296 C22 BYN 29 
BYN O4  O4  O 0 1 N N N 23.908 8.035  23.574 -1.108 -1.521 0.530  O4  BYN 30 
BYN O5  O5  O 0 1 N N N 22.510 6.473  26.563 -2.698 0.762  -1.855 O5  BYN 31 
BYN O6  O6  O 0 1 N N N 24.486 4.638  26.097 -3.498 -1.157 1.162  O6  BYN 32 
BYN O7  O7  O 0 1 N N N 26.858 6.184  26.062 -5.888 0.391  0.773  O7  BYN 33 
BYN P1  P1  P 0 1 N N N 27.626 5.698  27.403 -7.473 0.593  0.574  P1  BYN 34 
BYN O8  O8  O 0 1 N N N 29.079 5.519  26.979 -7.712 1.595  -0.489 O8  BYN 35 
BYN O9  O9  O 0 1 N N N 26.951 4.394  27.777 -8.144 -0.808 0.152  O9  BYN 36 
BYN O10 O10 O 0 1 N N N 27.422 6.788  28.436 -8.126 1.107  1.953  O10 BYN 37 
BYN H1  H1  H 0 1 N N N 22.465 13.595 27.256 3.504  -4.903 0.248  H1  BYN 38 
BYN H3  H3  H 0 1 N N N 21.750 8.005  21.930 0.531  1.674  -2.325 H3  BYN 39 
BYN H4  H4  H 0 1 N N N 20.271 14.362 23.235 4.534  -1.239 2.104  H4  BYN 40 
BYN H5  H5  H 0 1 N N N 18.586 14.342 21.590 6.057  0.705  2.136  H5  BYN 41 
BYN H6  H6  H 0 1 N N N 18.238 12.597 21.834 5.886  0.089  0.477  H6  BYN 42 
BYN H7  H7  H 0 1 N N N 22.162 8.252  18.836 2.026  4.246  -3.150 H7  BYN 43 
BYN H8  H8  H 0 1 N N N 20.983 7.244  19.743 0.451  4.088  -2.335 H8  BYN 44 
BYN H9  H9  H 0 1 N N N 20.403 8.420  18.515 1.751  5.044  -1.583 H9  BYN 45 
BYN H10 H10 H 0 1 N N N 19.182 10.713 18.443 3.220  4.908  0.379  H10 BYN 46 
BYN H11 H11 H 0 1 N N N 20.447 11.988 18.421 4.764  4.370  -0.325 H11 BYN 47 
BYN H12 H12 H 0 1 N N N 20.851 10.313 17.912 3.478  5.003  -1.380 H12 BYN 48 
BYN H13 H13 H 0 1 N N N 19.077 13.672 25.012 2.639  -0.136 3.047  H13 BYN 49 
BYN H14 H14 H 0 1 N N N 18.534 12.511 19.244 4.589  3.891  1.751  H14 BYN 50 
BYN H15 H15 H 0 1 N N N 19.058 14.229 19.227 3.816  2.539  2.614  H15 BYN 51 
BYN H16 H16 H 0 1 N N N 20.130 12.956 18.551 5.579  2.766  2.712  H16 BYN 52 
BYN H17 H17 H 0 1 N N N 21.728 13.857 21.774 5.999  3.615  -0.013 H17 BYN 53 
BYN H18 H18 H 0 1 N N N 21.957 13.725 19.997 6.996  2.202  0.408  H18 BYN 54 
BYN H19 H19 H 0 1 N N N 20.885 14.999 20.673 5.955  2.159  -1.035 H19 BYN 55 
BYN H20 H20 H 0 1 N N N 21.173 8.333  25.472 -0.384 0.070  -2.330 H20 BYN 56 
BYN H21 H21 H 0 1 N N N 21.282 7.710  23.791 -0.418 -1.675 -1.981 H21 BYN 57 
BYN H22 H22 H 0 1 N N N 23.613 8.615  25.544 -0.914 0.492  0.106  H22 BYN 58 
BYN H23 H23 H 0 1 N N N 22.616 5.905  24.583 -2.892 -1.251 -1.431 H23 BYN 59 
BYN H24 H24 H 0 1 N N N 24.963 5.747  24.424 -3.303 0.856  0.739  H24 BYN 60 
BYN H25 H25 H 0 1 N N N 25.561 7.793  25.715 -5.049 0.809  -1.068 H25 BYN 61 
BYN H26 H26 H 0 1 N N N 25.261 6.875  27.229 -5.314 -0.916 -0.720 H26 BYN 62 
BYN H27 H27 H 0 1 N N N 24.804 7.763  23.732 -1.278 -2.387 0.136  H27 BYN 63 
BYN H28 H28 H 0 1 N N N 22.512 5.581  26.890 -2.467 1.621  -1.475 H28 BYN 64 
BYN H29 H29 H 0 1 N N N 25.355 4.263  26.179 -3.729 -2.016 0.783  H29 BYN 65 
BYN H30 H30 H 0 1 N N N 27.568 3.678  27.679 -8.026 -1.513 0.804  H30 BYN 66 
BYN H31 H31 H 0 1 N N N 28.259 7.184  28.648 -9.081 1.251  1.907  H31 BYN 67 
BYN H2  H2  H 0 1 N N N 23.464 10.548 28.172 0.792  -5.177 -1.910 H2  BYN 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
BYN C15 C8  SING N N 1  
BYN C14 C9  SING N N 2  
BYN C16 C13 SING N N 3  
BYN C8  C9  DOUB Y N 4  
BYN C8  C7  SING Y N 5  
BYN C9  C10 SING Y N 6  
BYN C13 C17 SING N N 7  
BYN C13 C7  SING N N 8  
BYN C13 C12 SING N N 9  
BYN C7  C5  DOUB Y N 10 
BYN C10 C6  DOUB Y N 11 
BYN C12 C11 SING N N 12 
BYN C5  C6  SING Y N 13 
BYN C5  N3  SING N N 14 
BYN C6  N4  SING N N 15 
BYN C11 N3  SING N N 16 
BYN C11 O2  SING N N 17 
BYN N3  C3  SING N N 18 
BYN O4  C19 SING N N 19 
BYN N4  C18 SING N N 20 
BYN N4  C4  SING N N 21 
BYN C18 C19 SING N N 22 
BYN C3  C4  DOUB N N 23 
BYN C3  C2  SING N N 24 
BYN C19 C20 SING N N 25 
BYN C4  N2  SING N N 26 
BYN O3  C2  DOUB N N 27 
BYN C20 C21 SING N N 28 
BYN C20 O5  SING N N 29 
BYN C2  N1  SING N N 30 
BYN C21 O6  SING N N 31 
BYN C21 C22 SING N N 32 
BYN N2  C1  DOUB N N 33 
BYN O7  C22 SING N N 34 
BYN O7  P1  SING N N 35 
BYN N1  C1  SING N N 36 
BYN C1  O1  SING N N 37 
BYN O8  P1  DOUB N N 38 
BYN P1  O9  SING N N 39 
BYN P1  O10 SING N N 40 
BYN N1  H1  SING N N 41 
BYN C10 H3  SING N N 42 
BYN C11 H4  SING N N 43 
BYN C12 H5  SING N N 44 
BYN C12 H6  SING N N 45 
BYN C14 H7  SING N N 46 
BYN C14 H8  SING N N 47 
BYN C14 H9  SING N N 48 
BYN C15 H10 SING N N 49 
BYN C15 H11 SING N N 50 
BYN C15 H12 SING N N 51 
BYN O2  H13 SING N N 52 
BYN C16 H14 SING N N 53 
BYN C16 H15 SING N N 54 
BYN C16 H16 SING N N 55 
BYN C17 H17 SING N N 56 
BYN C17 H18 SING N N 57 
BYN C17 H19 SING N N 58 
BYN C18 H20 SING N N 59 
BYN C18 H21 SING N N 60 
BYN C19 H22 SING N N 61 
BYN C20 H23 SING N N 62 
BYN C21 H24 SING N N 63 
BYN C22 H25 SING N N 64 
BYN C22 H26 SING N N 65 
BYN O4  H27 SING N N 66 
BYN O5  H28 SING N N 67 
BYN O6  H29 SING N N 68 
BYN O9  H30 SING N N 69 
BYN O10 H31 SING N N 70 
BYN O1  H2  SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
BYN InChI            InChI                1.03  
"InChI=1S/C22H31N4O10P/c1-9-5-11-16-15(10(9)2)22(3,4)6-14(29)26(16)17-19(23-21(32)24-20(17)31)25(11)7-12(27)18(30)13(28)8-36-37(33,34)35/h5,12-14,18,27-30H,6-8H2,1-4H3,(H2,33,34,35)(H2,23,24,31,32)/t12-,13+,14+,18-/m0/s1" 
BYN InChIKey         InChI                1.03  BDNVCRCOZIAGID-LWGWVAHUSA-N 
BYN SMILES_CANONICAL CACTVS               3.385 "Cc1cc2N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)C3=C(N4[C@H](O)CC(C)(C)c(c1C)c24)C(=O)NC(=N3)O" 
BYN SMILES           CACTVS               3.385 "Cc1cc2N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)C3=C(N4[CH](O)CC(C)(C)c(c1C)c24)C(=O)NC(=N3)O" 
BYN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc2c3c(c1C)C(C[C@H](N3C4=C(N2C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)N=C(NC4=O)O)O)(C)C" 
BYN SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc2c3c(c1C)C(CC(N3C4=C(N2CC(C(C(COP(=O)(O)O)O)O)O)N=C(NC4=O)O)O)(C)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
BYN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"[(2~{R},3~{S},4~{S})-2,3,4-tris(oxidanyl)-5-[(16~{R})-11,12,14,14-tetramethyl-5,16-bis(oxidanyl)-3-oxidanylidene-1,4,6,8-tetrazatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadeca-2(7),5,9,11,13(17)-pentaen-8-yl]pentyl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
BYN "Create component" 2017-11-01 RCSB 
BYN "Initial release"  2017-12-20 RCSB 
# 
