data_A3N
# 
_chem_comp.id                                    A3N 
_chem_comp.name                                  "5'-deoxy-5'-(prop-2-yn-1-ylamino)adenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H16 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-01-05 
_chem_comp.pdbx_modified_date                    2012-03-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        304.305 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A3N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3V7Y 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A3N C13 C13 C 0 1 N N N 15.215 10.563 13.589 -6.469 -2.936 0.905  C13 A3N 1  
A3N C12 C12 C 0 1 N N N 14.448 10.429 13.113 -5.941 -2.107 0.263  C12 A3N 2  
A3N C11 C11 C 0 1 N N N 13.292 10.235 12.408 -5.279 -1.067 -0.542 C11 A3N 3  
A3N N5  N5  N 0 1 N N N 13.531 9.283  11.335 -4.141 -0.519 0.207  N5  A3N 4  
A3N C10 C10 C 0 1 N N N 13.851 10.015 10.116 -3.454 0.524  -0.567 C10 A3N 5  
A3N C9  C9  C 0 1 N N R 15.308 9.774  9.723  -2.276 1.069  0.243  C9  A3N 6  
A3N O1  O1  O 0 1 N N N 15.639 8.409  9.744  -1.280 0.046  0.406  O1  A3N 7  
A3N C8  C8  C 0 1 N N S 15.474 10.142 8.277  -1.615 2.237  -0.514 C8  A3N 8  
A3N O2  O2  O 0 1 N N N 15.692 11.531 8.185  -1.673 3.434  0.265  O2  A3N 9  
A3N C7  C7  C 0 1 N N R 16.705 9.369  7.938  -0.148 1.782  -0.706 C7  A3N 10 
A3N O3  O3  O 0 1 N N N 17.764 10.213 7.997  0.756  2.867  -0.487 O3  A3N 11 
A3N C6  C6  C 0 1 N N R 16.836 8.331  9.044  0.005  0.704  0.398  C6  A3N 12 
A3N N3  N3  N 0 1 Y N N 16.919 6.997  8.448  1.068  -0.243 0.051  N3  A3N 13 
A3N C5  C5  C 0 1 Y N N 15.939 6.356  7.845  0.906  -1.443 -0.575 C5  A3N 14 
A3N N4  N4  N 0 1 Y N N 16.405 5.196  7.438  2.060  -2.025 -0.727 N4  A3N 15 
A3N C2  C2  C 0 1 Y N N 17.680 5.112  7.776  3.033  -1.237 -0.210 C2  A3N 16 
A3N C3  C3  C 0 1 Y N N 17.990 6.234  8.402  2.409  -0.082 0.290  C3  A3N 17 
A3N N2  N2  N 0 1 Y N N 19.205 6.431  8.851  3.154  0.862  0.856  N2  A3N 18 
A3N C4  C4  C 0 1 Y N N 20.136 5.463  8.682  4.460  0.720  0.949  C4  A3N 19 
A3N N1  N1  N 0 1 Y N N 19.848 4.363  8.067  5.091  -0.348 0.494  N1  A3N 20 
A3N C1  C1  C 0 1 Y N N 18.604 4.179  7.597  4.429  -1.341 -0.091 C1  A3N 21 
A3N N6  N6  N 0 1 N N N 18.279 3.065  6.977  5.100  -2.453 -0.569 N6  A3N 22 
A3N H1  H1  H 0 1 N N N 16.106 10.719 14.142 -6.942 -3.678 1.479  H1  A3N 23 
A3N H2  H2  H 0 1 N N N 12.958 11.192 11.981 -4.925 -1.502 -1.477 H2  A3N 24 
A3N H3  H3  H 0 1 N N N 12.515 9.842  13.080 -5.989 -0.269 -0.759 H3  A3N 25 
A3N H4  H4  H 0 1 N N N 12.711 8.730  11.189 -3.500 -1.251 0.476  H4  A3N 26 
A3N H6  H6  H 0 1 N N N 13.694 11.090 10.286 -3.087 0.100  -1.502 H6  A3N 27 
A3N H7  H7  H 0 1 N N N 13.194 9.672  9.303  -4.151 1.333  -0.785 H7  A3N 28 
A3N H8  H8  H 0 1 N N N 15.978 10.374 10.356 -2.624 1.406  1.220  H8  A3N 29 
A3N H9  H9  H 0 1 N N N 14.613 9.807  7.679  -2.097 2.387  -1.479 H9  A3N 30 
A3N H10 H10 H 0 1 N N N 14.892 11.993 8.406  -1.270 4.201  -0.164 H10 A3N 31 
A3N H11 H11 H 0 1 N N N 16.601 8.876  6.960  -0.001 1.349  -1.695 H11 A3N 32 
A3N H12 H12 H 0 1 N N N 18.559 9.739  7.784  0.637  3.607  -1.098 H12 A3N 33 
A3N H13 H13 H 0 1 N N N 17.711 8.546  9.675  0.204  1.169  1.363  H13 A3N 34 
A3N H14 H14 H 0 1 N N N 14.931 6.719  7.709  -0.041 -1.851 -0.897 H14 A3N 35 
A3N H15 H15 H 0 1 N N N 21.134 5.612  9.067  5.036  1.505  1.414  H15 A3N 36 
A3N H16 H16 H 0 1 N N N 19.074 2.459  6.940  4.606  -3.172 -0.993 H16 A3N 37 
A3N H17 H17 H 0 1 N N N 17.538 2.612  7.472  6.064  -2.513 -0.481 H17 A3N 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A3N N6  C1  SING N N 1  
A3N N4  C2  SING Y N 2  
A3N N4  C5  DOUB Y N 3  
A3N C1  C2  DOUB Y N 4  
A3N C1  N1  SING Y N 5  
A3N C2  C3  SING Y N 6  
A3N C5  N3  SING Y N 7  
A3N C7  O3  SING N N 8  
A3N C7  C8  SING N N 9  
A3N C7  C6  SING N N 10 
A3N N1  C4  DOUB Y N 11 
A3N O2  C8  SING N N 12 
A3N C8  C9  SING N N 13 
A3N C3  N3  SING Y N 14 
A3N C3  N2  DOUB Y N 15 
A3N N3  C6  SING N N 16 
A3N C4  N2  SING Y N 17 
A3N C6  O1  SING N N 18 
A3N C9  O1  SING N N 19 
A3N C9  C10 SING N N 20 
A3N C10 N5  SING N N 21 
A3N N5  C11 SING N N 22 
A3N C11 C12 SING N N 23 
A3N C12 C13 TRIP N N 24 
A3N C13 H1  SING N N 25 
A3N C11 H2  SING N N 26 
A3N C11 H3  SING N N 27 
A3N N5  H4  SING N N 28 
A3N C10 H6  SING N N 29 
A3N C10 H7  SING N N 30 
A3N C9  H8  SING N N 31 
A3N C8  H9  SING N N 32 
A3N O2  H10 SING N N 33 
A3N C7  H11 SING N N 34 
A3N O3  H12 SING N N 35 
A3N C6  H13 SING N N 36 
A3N C5  H14 SING N N 37 
A3N C4  H15 SING N N 38 
A3N N6  H16 SING N N 39 
A3N N6  H17 SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A3N SMILES           ACDLabs              12.01 "n2c1c(ncnc1n(c2)C3OC(C(O)C3O)CNCC#C)N"                                                                                                                  
A3N InChI            InChI                1.03  "InChI=1S/C13H16N6O3/c1-2-3-15-4-7-9(20)10(21)13(22-7)19-6-18-8-11(14)16-5-17-12(8)19/h1,5-7,9-10,13,15,20-21H,3-4H2,(H2,14,16,17)/t7-,9-,10-,13-/m1/s1" 
A3N InChIKey         InChI                1.03  WYZJLWUBEMXBJJ-QYVSTXNMSA-N                                                                                                                              
A3N SMILES_CANONICAL CACTVS               3.370 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CNCC#C)[C@@H](O)[C@H]3O"                                                                                                  
A3N SMILES           CACTVS               3.370 "Nc1ncnc2n(cnc12)[CH]3O[CH](CNCC#C)[CH](O)[CH]3O"                                                                                                        
A3N SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C#CCNC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O"                                                                                                  
A3N SMILES           "OpenEye OEToolkits" 1.7.6 "C#CCNCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O"                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A3N "SYSTEMATIC NAME" ACDLabs              12.01 "5'-deoxy-5'-(prop-2-yn-1-ylamino)adenosine"                                       
A3N "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-[(prop-2-ynylamino)methyl]oxolane-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A3N "Create component" 2012-01-05 RCSB 
# 
