data_9VN
# 
_chem_comp.id                                    9VN 
_chem_comp.name                                  "(2~{S})-2-[4-(4,4-dimethylcyclohexen-1-yl)-2-methyl-5-pyridin-4-yl-thiophen-3-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H31 N O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-07-18 
_chem_comp.pdbx_modified_date                    2018-03-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        413.573 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9VN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5OI2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9VN C6  C1  C 0 1 N N N 32.741 -34.212 -26.466 -3.884 -0.107 -1.188 C6  9VN 1  
9VN C7  C2  C 0 1 N N N 32.066 -35.376 -25.751 -4.633 -0.769 -0.030 C7  9VN 2  
9VN C8  C3  C 0 1 N N N 33.915 -33.810 -25.611 -3.090 -1.167 -1.955 C8  9VN 3  
9VN C9  C4  C 0 1 N N N 31.845 -32.944 -26.647 -4.888 0.559  -2.130 C9  9VN 4  
9VN C3  C5  C 0 1 N N N 33.738 -34.547 -30.010 -2.534 0.402  1.633  C3  9VN 5  
9VN C1  C6  C 0 1 N N S 33.778 -33.883 -28.658 -2.003 0.359  0.223  C1  9VN 6  
9VN O4  O1  O 0 1 N N N 34.576 -34.306 -30.892 -3.603 0.916  1.860  O4  9VN 7  
9VN O5  O2  O 0 1 N N N 32.724 -35.355 -30.275 -1.819 -0.131 2.636  O5  9VN 8  
9VN O2  O3  O 0 1 N N N 33.185 -34.780 -27.714 -2.987 0.879  -0.673 O2  9VN 9  
9VN C22 C7  C 0 1 Y N N 35.193 -33.576 -28.373 -0.750 1.192  0.133  C22 9VN 10 
9VN C23 C8  C 0 1 Y N N 35.775 -32.330 -28.565 0.518  0.626  0.050  C23 9VN 11 
9VN C27 C9  C 0 1 N N N 35.003 -31.161 -28.955 0.750  -0.831 0.043  C27 9VN 12 
9VN C26 C10 C 0 1 N N N 34.702 -30.184 -27.855 0.883  -1.519 -1.284 C26 9VN 13 
9VN C28 C11 C 0 1 N N N 34.599 -31.002 -30.206 0.834  -1.449 1.199  C28 9VN 14 
9VN C29 C12 C 0 1 N N N 33.713 -29.856 -30.644 1.076  -2.923 1.342  C29 9VN 15 
9VN C30 C13 C 0 1 N N N 33.149 -29.054 -29.507 0.786  -3.636 0.019  C30 9VN 16 
9VN C51 C14 C 0 1 N N N 32.616 -27.747 -30.042 1.278  -5.082 0.096  C51 9VN 17 
9VN C25 C15 C 0 1 N N N 34.118 -28.879 -28.379 1.528  -2.895 -1.102 C25 9VN 18 
9VN C24 C16 C 0 1 N N N 31.983 -29.784 -28.914 -0.719 -3.618 -0.255 C24 9VN 19 
9VN C21 C17 C 0 1 Y N N 37.191 -32.201 -28.279 1.535  1.547  -0.025 C21 9VN 20 
9VN S35 S1  S 0 1 Y N N 37.725 -33.741 -27.786 0.854  3.168  0.011  S35 9VN 21 
9VN C20 C18 C 0 1 Y N N 36.213 -34.555 -27.999 -0.778 2.523  0.120  C20 9VN 22 
9VN C36 C19 C 0 1 N N N 36.138 -36.008 -27.686 -2.030 3.359  0.192  C36 9VN 23 
9VN C38 C20 C 0 1 Y N N 38.105 -31.054 -28.322 2.971  1.227  -0.119 C38 9VN 24 
9VN C42 C21 C 0 1 Y N N 39.208 -30.990 -27.512 3.786  1.848  -1.076 C42 9VN 25 
9VN C41 C22 C 0 1 Y N N 40.041 -29.876 -27.645 5.123  1.518  -1.128 C41 9VN 26 
9VN N52 N1  N 0 1 Y N N 39.821 -28.853 -28.500 5.637  0.631  -0.295 N52 9VN 27 
9VN C40 C23 C 0 1 Y N N 38.769 -28.916 -29.316 4.905  0.023  0.620  C40 9VN 28 
9VN C39 C24 C 0 1 Y N N 37.898 -30.015 -29.241 3.560  0.296  0.748  C39 9VN 29 
9VN H1  H1  H 0 1 N N N 31.689 -35.038 -24.775 -3.917 -1.244 0.642  H1  9VN 30 
9VN H2  H2  H 0 1 N N N 31.228 -35.744 -26.361 -5.198 -0.014 0.517  H2  9VN 31 
9VN H3  H3  H 0 1 N N N 32.794 -36.187 -25.602 -5.317 -1.522 -0.422 H3  9VN 32 
9VN H4  H4  H 0 1 N N N 33.551 -33.380 -24.666 -3.774 -1.919 -2.347 H4  9VN 33 
9VN H5  H5  H 0 1 N N N 34.533 -34.695 -25.397 -2.557 -0.695 -2.780 H5  9VN 34 
9VN H6  H6  H 0 1 N N N 34.519 -33.062 -26.146 -2.375 -1.641 -1.283 H6  9VN 35 
9VN H7  H7  H 0 1 N N N 31.543 -32.564 -25.660 -5.453 1.315  -1.583 H7  9VN 36 
9VN H8  H8  H 0 1 N N N 32.412 -32.167 -27.181 -4.354 1.031  -2.955 H8  9VN 37 
9VN H9  H9  H 0 1 N N N 30.949 -33.208 -27.228 -5.572 -0.193 -2.523 H9  9VN 38 
9VN H10 H10 H 0 1 N N N 33.202 -32.947 -28.702 -1.774 -0.672 -0.048 H10 9VN 39 
9VN H11 H11 H 0 1 N N N 32.787 -35.659 -31.173 -2.200 -0.079 3.523  H11 9VN 40 
9VN H12 H12 H 0 1 N N N 33.979 -30.642 -27.164 -0.105 -1.639 -1.729 H12 9VN 41 
9VN H13 H13 H 0 1 N N N 35.634 -29.962 -27.315 1.505  -0.915 -1.944 H13 9VN 42 
9VN H14 H14 H 0 1 N N N 34.916 -31.722 -30.946 0.722  -0.862 2.099  H14 9VN 43 
9VN H15 H15 H 0 1 N N N 34.306 -29.184 -31.281 2.115  -3.093 1.623  H15 9VN 44 
9VN H16 H16 H 0 1 N N N 32.876 -30.269 -31.226 0.424  -3.323 2.118  H16 9VN 45 
9VN H17 H17 H 0 1 N N N 32.201 -27.153 -29.214 0.763  -5.599 0.906  H17 9VN 46 
9VN H18 H18 H 0 1 N N N 33.432 -27.187 -30.521 1.070  -5.587 -0.848 H18 9VN 47 
9VN H19 H19 H 0 1 N N N 31.826 -27.948 -30.781 2.352  -5.092 0.284  H19 9VN 48 
9VN H20 H20 H 0 1 N N N 34.946 -28.246 -28.730 1.448  -3.460 -2.030 H20 9VN 49 
9VN H21 H21 H 0 1 N N N 33.597 -28.376 -27.551 2.577  -2.776 -0.831 H21 9VN 50 
9VN H22 H22 H 0 1 N N N 31.568 -29.198 -28.081 -1.084 -2.592 -0.212 H22 9VN 51 
9VN H23 H23 H 0 1 N N N 31.210 -29.926 -29.683 -0.913 -4.032 -1.244 H23 9VN 52 
9VN H24 H24 H 0 1 N N N 32.315 -30.765 -28.543 -1.232 -4.218 0.497  H24 9VN 53 
9VN H25 H25 H 0 1 N N N 37.122 -36.361 -27.345 -2.265 3.571  1.235  H25 9VN 54 
9VN H26 H26 H 0 1 N N N 35.394 -36.174 -26.893 -1.873 4.295  -0.343 H26 9VN 55 
9VN H27 H27 H 0 1 N N N 35.842 -36.563 -28.589 -2.857 2.814  -0.264 H27 9VN 56 
9VN H28 H28 H 0 1 N N N 39.425 -31.771 -26.798 3.373  2.573  -1.761 H28 9VN 57 
9VN H29 H29 H 0 1 N N N 40.922 -29.829 -27.021 5.760  1.991  -1.861 H29 9VN 58 
9VN H30 H30 H 0 1 N N N 38.588 -28.127 -30.030 5.369  -0.692 1.283  H30 9VN 59 
9VN H31 H31 H 0 1 N N N 37.049 -30.061 -29.907 2.968  -0.205 1.499  H31 9VN 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9VN O4  C3  DOUB N N 1  
9VN C29 C28 SING N N 2  
9VN C29 C30 SING N N 3  
9VN O5  C3  SING N N 4  
9VN C28 C27 DOUB N N 5  
9VN C51 C30 SING N N 6  
9VN C3  C1  SING N N 7  
9VN C30 C24 SING N N 8  
9VN C30 C25 SING N N 9  
9VN C40 C39 DOUB Y N 10 
9VN C40 N52 SING Y N 11 
9VN C39 C38 SING Y N 12 
9VN C27 C23 SING N N 13 
9VN C27 C26 SING N N 14 
9VN C1  C22 SING N N 15 
9VN C1  O2  SING N N 16 
9VN C23 C22 SING Y N 17 
9VN C23 C21 DOUB Y N 18 
9VN N52 C41 DOUB Y N 19 
9VN C25 C26 SING N N 20 
9VN C22 C20 DOUB Y N 21 
9VN C38 C21 SING N N 22 
9VN C38 C42 DOUB Y N 23 
9VN C21 S35 SING Y N 24 
9VN C20 S35 SING Y N 25 
9VN C20 C36 SING N N 26 
9VN O2  C6  SING N N 27 
9VN C41 C42 SING Y N 28 
9VN C9  C6  SING N N 29 
9VN C6  C7  SING N N 30 
9VN C6  C8  SING N N 31 
9VN C7  H1  SING N N 32 
9VN C7  H2  SING N N 33 
9VN C7  H3  SING N N 34 
9VN C8  H4  SING N N 35 
9VN C8  H5  SING N N 36 
9VN C8  H6  SING N N 37 
9VN C9  H7  SING N N 38 
9VN C9  H8  SING N N 39 
9VN C9  H9  SING N N 40 
9VN C1  H10 SING N N 41 
9VN O5  H11 SING N N 42 
9VN C26 H12 SING N N 43 
9VN C26 H13 SING N N 44 
9VN C28 H14 SING N N 45 
9VN C29 H15 SING N N 46 
9VN C29 H16 SING N N 47 
9VN C51 H17 SING N N 48 
9VN C51 H18 SING N N 49 
9VN C51 H19 SING N N 50 
9VN C25 H20 SING N N 51 
9VN C25 H21 SING N N 52 
9VN C24 H22 SING N N 53 
9VN C24 H23 SING N N 54 
9VN C24 H24 SING N N 55 
9VN C36 H25 SING N N 56 
9VN C36 H26 SING N N 57 
9VN C36 H27 SING N N 58 
9VN C42 H28 SING N N 59 
9VN C41 H29 SING N N 60 
9VN C40 H30 SING N N 61 
9VN C39 H31 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9VN InChI            InChI                1.03  "InChI=1S/C24H31NO3S/c1-15-18(20(22(26)27)28-23(2,3)4)19(16-7-11-24(5,6)12-8-16)21(29-15)17-9-13-25-14-10-17/h7,9-10,13-14,20H,8,11-12H2,1-6H3,(H,26,27)/t20-/m0/s1" 
9VN InChIKey         InChI                1.03  AOGLTJVFULDNHV-FQEVSTJZSA-N                                                                                                                                          
9VN SMILES_CANONICAL CACTVS               3.385 "Cc1sc(c2ccncc2)c(C3=CCC(C)(C)CC3)c1[C@H](OC(C)(C)C)C(O)=O"                                                                                                          
9VN SMILES           CACTVS               3.385 "Cc1sc(c2ccncc2)c(C3=CCC(C)(C)CC3)c1[CH](OC(C)(C)C)C(O)=O"                                                                                                           
9VN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(s1)c2ccncc2)C3=CCC(CC3)(C)C)[C@@H](C(=O)O)OC(C)(C)C"                                                                                                       
9VN SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(s1)c2ccncc2)C3=CCC(CC3)(C)C)C(C(=O)O)OC(C)(C)C"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9VN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-[4-(4,4-dimethylcyclohexen-1-yl)-2-methyl-5-pyridin-4-yl-thiophen-3-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9VN "Create component" 2017-07-18 EBI  
9VN "Initial release"  2018-03-07 RCSB 
# 
