data_7JN
# 
_chem_comp.id                                    7JN 
_chem_comp.name                                  "4'-fluoro-4,5-dihydroxy-N-{[(1R,2R)-2-{(2S,4R,5R)-4-hydroxy-5-[6-(methylamino)-9H-purin-9-yl]oxolan-2-yl}cyclopropyl]methyl}[1,1'-biphenyl]-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H27 F N6 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-11-02 
_chem_comp.pdbx_modified_date                    2017-11-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        534.539 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7JN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5P9W 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7JN N1  N1  N 0 1 Y N N -6.154 21.186 12.960 -4.731 -0.060 0.101  N1  7JN 1  
7JN C4  C1  C 0 1 Y N N -7.170 21.627 11.073 -6.047 0.864  -1.426 C4  7JN 2  
7JN C6  C2  C 0 1 Y N N -0.370 13.970 14.574 4.267  -1.552 -0.884 C6  7JN 3  
7JN C7  C3  C 0 1 Y N N -6.685 20.087 12.480 -4.391 -0.507 -1.141 C7  7JN 4  
7JN C10 C4  C 0 1 N N S -4.954 19.293 15.350 -2.404 -1.691 2.288  C10 7JN 5  
7JN C13 C5  C 0 1 Y N N 0.830  14.444 14.091 5.217  -2.005 -1.808 C13 7JN 6  
7JN C15 C6  C 0 1 N N N -1.678 14.663 14.351 3.068  -2.362 -0.598 C15 7JN 7  
7JN C20 C7  C 0 1 Y N N 0.788  12.029 15.464 5.597  0.421  -0.498 C20 7JN 8  
7JN C21 C8  C 0 1 Y N N 2.032  13.778 14.340 6.351  -1.240 -2.070 C21 7JN 9  
7JN C26 C9  C 0 1 N N N -2.802 16.720 13.595 0.967  -2.732 0.580  C26 7JN 10 
7JN F38 F1  F 0 1 N N N 0.570  7.223  18.347 6.379  5.316  2.116  F38 7JN 11 
7JN C35 C10 C 0 1 Y N N 0.606  8.366  17.623 6.191  4.136  1.487  C35 7JN 12 
7JN C37 C11 C 0 1 Y N N -0.209 9.388  18.014 5.054  3.388  1.746  C37 7JN 13 
7JN C30 C12 C 0 1 Y N N -0.197 10.574 17.312 4.858  2.181  1.106  C30 7JN 14 
7JN C36 C13 C 0 1 Y N N 1.516  8.494  16.608 7.133  3.679  0.579  C36 7JN 15 
7JN C31 C14 C 0 1 Y N N 1.540  9.691  15.888 6.942  2.476  -0.069 C31 7JN 16 
7JN C27 C15 C 0 1 Y N N 0.698  10.728 16.258 5.806  1.715  0.197  C27 7JN 17 
7JN C23 C16 C 0 1 Y N N 2.007  12.574 15.021 6.540  -0.035 -1.420 C23 7JN 18 
7JN O33 O1  O 0 1 N N N 3.252  14.247 13.876 7.273  -1.679 -2.968 O33 7JN 19 
7JN O32 O2  O 0 1 N N N 1.001  15.598 13.381 5.033  -3.188 -2.447 O32 7JN 20 
7JN C14 C17 C 0 1 Y N N -0.372 12.747 15.272 4.463  -0.335 -0.229 C14 7JN 21 
7JN O28 O3  O 0 1 N N N -2.760 14.145 14.658 2.900  -3.422 -1.169 O28 7JN 22 
7JN N24 N2  N 0 1 N N N -1.626 15.914 13.846 2.158  -1.927 0.296  N24 7JN 23 
7JN C12 C18 C 0 1 N N R -3.272 17.473 14.831 0.105  -2.017 1.623  C12 7JN 24 
7JN C11 C19 C 0 1 N N N -4.272 16.802 15.777 -0.094 -2.711 2.971  C11 7JN 25 
7JN C9  C20 C 0 1 N N R -4.743 17.897 14.823 -1.248 -2.641 1.969  C9  7JN 26 
7JN O8  O4  O 0 1 N N N -4.531 20.255 14.365 -2.746 -0.904 1.127  O8  7JN 27 
7JN C19 C21 C 0 1 N N N -6.383 19.637 15.678 -3.684 -2.491 2.613  C19 7JN 28 
7JN C18 C22 C 0 1 N N R -6.412 21.134 15.404 -4.821 -1.650 1.991  C18 7JN 29 
7JN O34 O5  O 0 1 N N N -5.798 21.760 16.536 -5.734 -1.216 3.001  O34 7JN 30 
7JN C3  C23 C 0 1 N N R -5.441 21.322 14.238 -4.093 -0.441 1.364  C3  7JN 31 
7JN N5  N3  N 0 1 Y N N -7.283 20.298 11.329 -5.165 0.037  -2.036 N5  7JN 32 
7JN C2  C24 C 0 1 Y N N -6.475 22.167 12.116 -5.775 0.817  -0.048 C2  7JN 33 
7JN N17 N4  N 0 1 Y N N -6.172 23.476 12.173 -6.512 1.550  0.781  N17 7JN 34 
7JN C25 C25 C 0 1 Y N N -6.574 24.232 11.157 -7.482 2.311  0.322  C25 7JN 35 
7JN N22 N5  N 0 1 Y N N -7.287 23.749 10.122 -7.775 2.388  -0.964 N22 7JN 36 
7JN C16 C26 C 0 1 Y N N -7.627 22.447 10.084 -7.093 1.692  -1.868 C16 7JN 37 
7JN N29 N6  N 0 1 N N N -8.352 22.069 9.032  -7.407 1.780  -3.213 N29 7JN 38 
7JN C39 C27 C 0 1 N N N -8.930 20.721 8.885  -8.500 2.649  -3.655 C39 7JN 39 
7JN H1  H1  H 0 1 N N N -6.637 19.126 12.971 -3.598 -1.208 -1.352 H1  7JN 40 
7JN H2  H2  H 0 1 N N N -4.349 19.416 16.261 -2.140 -1.041 3.123  H2  7JN 41 
7JN H3  H3  H 0 1 N N N -2.567 17.450 12.806 0.392  -2.865 -0.336 H3  7JN 42 
7JN H4  H4  H 0 1 N N N -3.614 16.061 13.254 1.269  -3.706 0.965  H4  7JN 43 
7JN H5  H5  H 0 1 N N N -0.859 9.268  18.868 4.320  3.750  2.451  H5  7JN 44 
7JN H6  H6  H 0 1 N N N -0.873 11.373 17.577 3.971  1.599  1.310  H6  7JN 45 
7JN H7  H7  H 0 1 N N N 2.197  7.691  16.370 8.017  4.265  0.380  H7  7JN 46 
7JN H8  H8  H 0 1 N N N 2.210  9.808  15.049 7.679  2.119  -0.773 H8  7JN 47 
7JN H9  H9  H 0 1 N N N 2.930  12.048 15.214 7.420  0.556  -1.626 H9  7JN 48 
7JN H10 H10 H 0 1 N N N 3.944  13.656 14.149 7.109  -1.389 -3.875 H10 7JN 49 
7JN H11 H11 H 0 1 N N N 0.157  16.011 13.239 5.411  -3.948 -1.985 H11 7JN 50 
7JN H12 H12 H 0 1 N N N -1.302 12.364 15.665 3.733  0.019  0.484  H12 7JN 51 
7JN H13 H13 H 0 1 N N N -0.730 16.304 13.635 2.292  -1.082 0.752  H13 7JN 52 
7JN H14 H14 H 0 1 N N N -2.558 18.176 15.285 0.172  -0.929 1.622  H14 7JN 53 
7JN H15 H15 H 0 1 N N N -4.223 16.999 16.858 0.389  -3.678 3.116  H15 7JN 54 
7JN H16 H16 H 0 1 N N N -4.574 15.758 15.607 -0.157 -2.080 3.858  H16 7JN 55 
7JN H17 H17 H 0 1 N N N -5.349 17.583 13.960 -1.524 -3.561 1.454  H17 7JN 56 
7JN H18 H18 H 0 1 N N N -7.085 19.097 15.026 -3.644 -3.479 2.153  H18 7JN 57 
7JN H19 H19 H 0 1 N N N -6.617 19.418 16.730 -3.817 -2.579 3.691  H19 7JN 58 
7JN H20 H20 H 0 1 N N N -7.422 21.504 15.176 -5.345 -2.222 1.225  H20 7JN 59 
7JN H21 H21 H 0 1 N N N -6.364 21.671 17.293 -6.174 -1.938 3.470  H21 7JN 60 
7JN H22 H22 H 0 1 N N N -4.943 22.300 14.311 -4.089 0.402  2.055  H22 7JN 61 
7JN H23 H23 H 0 1 N N N -6.317 25.281 11.162 -8.062 2.894  1.022  H23 7JN 62 
7JN H24 H24 H 0 1 N N N -7.766 22.204 8.233  -6.902 1.267  -3.863 H24 7JN 63 
7JN H25 H25 H 0 1 N N N -9.482 20.660 7.935  -9.431 2.326  -3.188 H25 7JN 64 
7JN H26 H26 H 0 1 N N N -8.123 19.974 8.889  -8.287 3.678  -3.366 H26 7JN 65 
7JN H27 H27 H 0 1 N N N -9.617 20.524 9.721  -8.597 2.588  -4.739 H27 7JN 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7JN C39 N29 SING N N 1  
7JN N29 C16 SING N N 2  
7JN C16 N22 DOUB Y N 3  
7JN C16 C4  SING Y N 4  
7JN N22 C25 SING Y N 5  
7JN C4  N5  SING Y N 6  
7JN C4  C2  DOUB Y N 7  
7JN C25 N17 DOUB Y N 8  
7JN N5  C7  DOUB Y N 9  
7JN C2  N17 SING Y N 10 
7JN C2  N1  SING Y N 11 
7JN C7  N1  SING Y N 12 
7JN N1  C3  SING N N 13 
7JN O32 C13 SING N N 14 
7JN C26 N24 SING N N 15 
7JN C26 C12 SING N N 16 
7JN N24 C15 SING N N 17 
7JN O33 C21 SING N N 18 
7JN C13 C21 DOUB Y N 19 
7JN C13 C6  SING Y N 20 
7JN C3  O8  SING N N 21 
7JN C3  C18 SING N N 22 
7JN C21 C23 SING Y N 23 
7JN C15 C6  SING N N 24 
7JN C15 O28 DOUB N N 25 
7JN O8  C10 SING N N 26 
7JN C6  C14 DOUB Y N 27 
7JN C9  C12 SING N N 28 
7JN C9  C10 SING N N 29 
7JN C9  C11 SING N N 30 
7JN C12 C11 SING N N 31 
7JN C23 C20 DOUB Y N 32 
7JN C14 C20 SING Y N 33 
7JN C10 C19 SING N N 34 
7JN C18 C19 SING N N 35 
7JN C18 O34 SING N N 36 
7JN C20 C27 SING N N 37 
7JN C31 C27 DOUB Y N 38 
7JN C31 C36 SING Y N 39 
7JN C27 C30 SING Y N 40 
7JN C36 C35 DOUB Y N 41 
7JN C30 C37 DOUB Y N 42 
7JN C35 C37 SING Y N 43 
7JN C35 F38 SING N N 44 
7JN C7  H1  SING N N 45 
7JN C10 H2  SING N N 46 
7JN C26 H3  SING N N 47 
7JN C26 H4  SING N N 48 
7JN C37 H5  SING N N 49 
7JN C30 H6  SING N N 50 
7JN C36 H7  SING N N 51 
7JN C31 H8  SING N N 52 
7JN C23 H9  SING N N 53 
7JN O33 H10 SING N N 54 
7JN O32 H11 SING N N 55 
7JN C14 H12 SING N N 56 
7JN N24 H13 SING N N 57 
7JN C12 H14 SING N N 58 
7JN C11 H15 SING N N 59 
7JN C11 H16 SING N N 60 
7JN C9  H17 SING N N 61 
7JN C19 H18 SING N N 62 
7JN C19 H19 SING N N 63 
7JN C18 H20 SING N N 64 
7JN O34 H21 SING N N 65 
7JN C3  H22 SING N N 66 
7JN C25 H23 SING N N 67 
7JN N29 H24 SING N N 68 
7JN C39 H25 SING N N 69 
7JN C39 H26 SING N N 70 
7JN C39 H27 SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7JN SMILES           ACDLabs              12.01 "n5(C1OC(CC1O)C4C(CNC(c3cc(c2ccc(F)cc2)cc(c3O)O)=O)C4)cnc6c5ncnc6NC" 
7JN InChI            InChI                1.03  
"InChI=1S/C27H27FN6O5/c1-29-24-22-25(32-11-31-24)34(12-33-22)27-20(36)9-21(39-27)17-7-15(17)10-30-26(38)18-6-14(8-19(35)23(18)37)13-2-4-16(28)5-3-13/h2-6,8,11-12,15,17,20-21,27,35-37H,7,9-10H2,1H3,(H,30,38)(H,29,31,32)/t15-,17+,20+,21-,27+/m0/s1" 
7JN InChIKey         InChI                1.03  HZZZGURCIAIEDZ-YJFPSUCWSA-N 
7JN SMILES_CANONICAL CACTVS               3.385 "CNc1ncnc2n(cnc12)[C@@H]3O[C@@H](C[C@H]3O)[C@@H]4C[C@H]4CNC(=O)c5cc(cc(O)c5O)c6ccc(F)cc6" 
7JN SMILES           CACTVS               3.385 "CNc1ncnc2n(cnc12)[CH]3O[CH](C[CH]3O)[CH]4C[CH]4CNC(=O)c5cc(cc(O)c5O)c6ccc(F)cc6" 
7JN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CNc1c2c(ncn1)n(cn2)[C@H]3[C@@H](C[C@H](O3)[C@@H]4C[C@H]4CNC(=O)c5cc(cc(c5O)O)c6ccc(cc6)F)O" 
7JN SMILES           "OpenEye OEToolkits" 1.7.6 "CNc1c2c(ncn1)n(cn2)C3C(CC(O3)C4CC4CNC(=O)c5cc(cc(c5O)O)c6ccc(cc6)F)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7JN "SYSTEMATIC NAME" ACDLabs              12.01 "4'-fluoro-4,5-dihydroxy-N-{[(1R,2R)-2-{(2S,4R,5R)-4-hydroxy-5-[6-(methylamino)-9H-purin-9-yl]oxolan-2-yl}cyclopropyl]methyl}[1,1'-biphenyl]-3-carboxamide" 
7JN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-(4-fluorophenyl)-N-[[(1R,2R)-2-[(2S,4R,5R)-5-[6-(methylamino)purin-9-yl]-4-oxidanyl-oxolan-2-yl]cyclopropyl]methyl]-2,3-bis(oxidanyl)benzamide"          
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7JN "Create component" 2016-11-02 RCSB 
7JN "Initial release"  2017-11-22 RCSB 
# 
