data_59N
# 
_chem_comp.id                                    59N 
_chem_comp.name                                  "8-[(trans-4-aminocyclohexyl)methyl]-6-[2-chloro-4-(6-methylpyrazin-2-yl)phenyl]-2-(ethylamino)pyrido[2,3-d]pyrimidin-7(8H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H30 Cl N7 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-08-27 
_chem_comp.pdbx_modified_date                    2016-09-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        504.026 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     59N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5DEW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
59N N3  N1  N  0 1 N N N 10.225 -11.750 -20.864 5.583   2.554  -0.034 N3   59N 1  
59N C4  C1  C  0 1 Y N N 9.060  -11.494 -20.182 4.218   2.382  0.078  C4   59N 2  
59N C6  C2  C  0 1 Y N N 7.970  -11.311 -18.161 2.343   1.150  -0.444 C6   59N 3  
59N C8  C3  C  0 1 N N N 6.842  -11.160 -16.103 0.421   -0.114 -0.981 C8   59N 4  
59N C10 C4  C  0 1 N N N 5.601  -10.788 -16.786 -0.414  0.811  -0.211 C10  59N 5  
59N C13 C5  C  0 1 Y N N 6.832  -10.932 -20.258 2.212   3.135  0.934  C13  59N 6  
59N C15 C6  C  0 1 Y N N 4.419  -10.449 -15.938 -1.875  0.593  -0.113 C15  59N 7  
59N C17 C7  C  0 1 Y N N 2.659  -11.040 -14.402 -3.737  -0.623 0.799  C17  59N 8  
59N C20 C8  C  0 1 Y N N 4.022  -9.108  -15.857 -2.752  1.396  -0.844 C20  59N 9  
59N C21 C9  C  0 1 Y N N 1.106  -9.312  -13.462 -6.076  -0.028 0.174  C21  59N 10 
59N C24 C10 C  0 1 Y N N -0.942 -8.570  -11.859 -8.710  -0.459 0.390  C24  59N 11 
59N C26 C11 C  0 1 Y N N 0.405  -8.121  -13.675 -6.585  -0.968 1.071  C26  59N 12 
59N C1  C12 C  0 1 N N N 12.163 -10.530 -20.071 7.738   3.646  0.347  C1   59N 13 
59N C2  C13 C  0 1 N N N 11.494 -11.903 -20.150 6.235   3.688  0.627  C2   59N 14 
59N N5  N2  N  0 1 Y N N 9.070  -11.565 -18.857 3.654   1.350  -0.529 N5   59N 15 
59N N7  N3  N  0 1 N N N 7.976  -11.380 -16.789 1.750   0.083  -1.070 N7   59N 16 
59N O9  O1  O  0 1 N N N 6.847  -11.247 -14.885 -0.089  -1.067 -1.543 O9   59N 17 
59N C11 C14 C  0 1 N N N 5.584  -10.710 -18.148 0.168   1.882  0.413  C11  59N 18 
59N C12 C15 C  0 1 Y N N 6.783  -10.994 -18.859 1.566   2.060  0.306  C12  59N 19 
59N N14 N4  N  0 1 Y N N 7.969  -11.190 -20.879 3.519   3.256  0.796  N14  59N 20 
59N C16 C16 C  0 1 Y N N 3.730  -11.418 -15.195 -2.377  -0.421 0.708  C16  59N 21 
59N C18 C17 C  0 1 Y N N 2.252  -9.704  -14.337 -4.612  0.185  0.071  C18  59N 22 
59N C19 C18 C  0 1 Y N N 2.949  -8.734  -15.063 -4.111  1.193  -0.753 C19  59N 23 
59N N22 N5  N  0 1 Y N N 0.764  -10.091 -12.432 -6.907  0.672  -0.592 N22  59N 24 
59N C23 C19 C  0 1 Y N N -0.242 -9.743  -11.637 -8.209  0.475  -0.501 C23  59N 25 
59N N25 N6  N  0 1 Y N N -0.601 -7.789  -12.872 -7.888  -1.158 1.154  N25  59N 26 
59N C27 C20 C  0 1 N N N -0.631 -10.624 -10.482 -9.153  1.267  -1.369 C27  59N 27 
59N CL1 CL1 CL 0 0 N N N 4.202  -13.089 -15.259 -1.288  -1.425 1.612  CL28 59N 28 
59N C29 C21 C  0 1 N N N 9.214  -11.740 -16.076 2.572   -0.851 -1.844 C29  59N 29 
59N C30 C22 C  0 1 N N N 10.217 -10.562 -15.988 3.056   -1.980 -0.932 C30  59N 30 
59N C32 C23 C  0 1 N N N 9.512  -9.203  -15.848 3.809   -3.020 -1.764 C32  59N 31 
59N C33 C24 C  0 1 N N N 10.506 -8.049  -15.645 4.294   -4.149 -0.852 C33  59N 32 
59N C34 C25 C  0 1 N N N 11.406 -8.343  -14.452 5.228   -3.576 0.216  C34  59N 33 
59N C36 C26 C  0 1 N N N 12.190 -9.616  -14.754 4.476   -2.536 1.048  C36  59N 34 
59N C37 C27 C  0 1 N N N 11.178 -10.768 -14.806 3.991   -1.407 0.136  C37  59N 35 
59N N38 N7  N  0 1 N N N 12.300 -7.213  -14.174 5.694   -4.660 1.091  N38  59N 36 
59N H1  H1  H  0 1 N N N 10.078 -12.600 -21.370 6.111   1.923  -0.546 H1   59N 37 
59N H2  H2  H  0 1 N N N 5.948  -10.676 -20.823 1.651   3.852  1.516  H2   59N 38 
59N H3  H3  H  0 1 N N N 2.132  -11.787 -13.827 -4.126  -1.403 1.436  H3   59N 39 
59N H4  H4  H  0 1 N N N 4.558  -8.357  -16.419 -2.364  2.176  -1.482 H4   59N 40 
59N H5  H5  H  0 1 N N N -1.760 -8.294  -11.211 -9.776  -0.617 0.462  H5   59N 41 
59N H6  H6  H  0 1 N N N 0.681  -7.471  -14.492 -5.914  -1.540 1.695  H6   59N 42 
59N H7  H7  H  0 1 N N N 13.121 -10.618 -19.538 8.154   2.714  0.730  H7   59N 43 
59N H8  H8  H  0 1 N N N 12.343 -10.151 -21.088 7.909   3.705  -0.728 H8   59N 44 
59N H9  H9  H  0 1 N N N 11.506 -9.833  -19.531 8.223   4.489  0.838  H9   59N 45 
59N H10 H10 H  0 1 N N N 11.307 -12.286 -19.136 5.819   4.620  0.244  H10  59N 46 
59N H11 H11 H  0 1 N N N 12.145 -12.604 -20.693 6.064   3.629  1.702  H11  59N 47 
59N H12 H12 H  0 1 N N N 4.681  -10.439 -18.674 -0.430  2.575  0.985  H12  59N 48 
59N H13 H13 H  0 1 N N N 2.653  -7.697  -15.006 -4.789  1.815  -1.319 H13  59N 49 
59N H14 H14 H  0 1 N N N 0.026  -11.506 -10.455 -9.439  2.183  -0.852 H14  59N 50 
59N H15 H15 H  0 1 N N N -0.529 -10.062 -9.542  -8.658  1.519  -2.307 H15  59N 51 
59N H16 H16 H  0 1 N N N -1.675 -10.948 -10.604 -10.043 0.673  -1.575 H16  59N 52 
59N H17 H17 H  0 1 N N N 8.953  -12.057 -15.056 1.978   -1.270 -2.656 H17  59N 53 
59N H18 H18 H  0 1 N N N 9.696  -12.574 -16.607 3.431   -0.323 -2.256 H18  59N 54 
59N H19 H19 H  0 1 N N N 10.809 -10.548 -16.915 2.200   -2.451 -0.450 H19  59N 55 
59N H20 H20 H  0 1 N N N 8.929  -9.011  -16.761 3.143   -3.428 -2.524 H20  59N 56 
59N H21 H21 H  0 1 N N N 8.835  -9.243  -14.982 4.666   -2.549 -2.246 H21  59N 57 
59N H22 H22 H  0 1 N N N 11.123 -7.936  -16.548 3.437   -4.620 -0.370 H22  59N 58 
59N H23 H23 H  0 1 N N N 9.951  -7.117  -15.462 4.830   -4.890 -1.445 H23  59N 59 
59N H24 H24 H  0 1 N N N 10.771 -8.526  -13.573 6.085   -3.105 -0.266 H24  59N 60 
59N H25 H25 H  0 1 N N N 12.931 -9.800  -13.962 3.619   -3.007 1.530  H25  59N 61 
59N H26 H26 H  0 1 N N N 12.704 -9.522  -15.722 5.142   -2.128 1.808  H26  59N 62 
59N H27 H27 H  0 1 N N N 10.604 -10.793 -13.868 4.848   -0.936 -0.346 H27  59N 63 
59N H28 H28 H  0 1 N N N 11.714 -11.720 -14.933 3.455   -0.666 0.729  H28  59N 64 
59N H29 H29 H  0 1 N N N 12.879 -7.431  -13.388 6.313   -4.308 1.805  H29  59N 65 
59N H31 H31 H  0 1 N N N 12.875 -7.039  -14.973 4.915   -5.155 1.500  H31  59N 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
59N N14 C13 DOUB Y N 1  
59N N14 C4  SING Y N 2  
59N N3  C4  SING N N 3  
59N N3  C2  SING N N 4  
59N C13 C12 SING Y N 5  
59N C4  N5  DOUB Y N 6  
59N C2  C1  SING N N 7  
59N C12 C6  DOUB Y N 8  
59N C12 C11 SING N N 9  
59N N5  C6  SING Y N 10 
59N C6  N7  SING N N 11 
59N C11 C10 DOUB N N 12 
59N N7  C8  SING N N 13 
59N N7  C29 SING N N 14 
59N C10 C8  SING N N 15 
59N C10 C15 SING N N 16 
59N C8  O9  DOUB N N 17 
59N C29 C30 SING N N 18 
59N C30 C32 SING N N 19 
59N C30 C37 SING N N 20 
59N C15 C20 DOUB Y N 21 
59N C15 C16 SING Y N 22 
59N C20 C19 SING Y N 23 
59N C32 C33 SING N N 24 
59N C33 C34 SING N N 25 
59N CL1 C16 SING N N 26 
59N C16 C17 DOUB Y N 27 
59N C19 C18 DOUB Y N 28 
59N C37 C36 SING N N 29 
59N C36 C34 SING N N 30 
59N C34 N38 SING N N 31 
59N C17 C18 SING Y N 32 
59N C18 C21 SING N N 33 
59N C26 C21 DOUB Y N 34 
59N C26 N25 SING Y N 35 
59N C21 N22 SING Y N 36 
59N N25 C24 DOUB Y N 37 
59N N22 C23 DOUB Y N 38 
59N C24 C23 SING Y N 39 
59N C23 C27 SING N N 40 
59N N3  H1  SING N N 41 
59N C13 H2  SING N N 42 
59N C17 H3  SING N N 43 
59N C20 H4  SING N N 44 
59N C24 H5  SING N N 45 
59N C26 H6  SING N N 46 
59N C1  H7  SING N N 47 
59N C1  H8  SING N N 48 
59N C1  H9  SING N N 49 
59N C2  H10 SING N N 50 
59N C2  H11 SING N N 51 
59N C11 H12 SING N N 52 
59N C19 H13 SING N N 53 
59N C27 H14 SING N N 54 
59N C27 H15 SING N N 55 
59N C27 H16 SING N N 56 
59N C29 H17 SING N N 57 
59N C29 H18 SING N N 58 
59N C30 H19 SING N N 59 
59N C32 H20 SING N N 60 
59N C32 H21 SING N N 61 
59N C33 H22 SING N N 62 
59N C33 H23 SING N N 63 
59N C34 H24 SING N N 64 
59N C36 H25 SING N N 65 
59N C36 H26 SING N N 66 
59N C37 H27 SING N N 67 
59N C37 H28 SING N N 68 
59N N38 H29 SING N N 69 
59N N38 H31 SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
59N SMILES           ACDLabs              12.01 "N(c4nc3N(C(=O)C(c1ccc(cc1Cl)c2nc(cnc2)C)=Cc3cn4)CC5CCC(N)CC5)CC"                                                                                                                                    
59N InChI            InChI                1.03  "InChI=1S/C27H30ClN7O/c1-3-31-27-32-13-19-10-22(21-9-6-18(11-23(21)28)24-14-30-12-16(2)33-24)26(36)35(25(19)34-27)15-17-4-7-20(29)8-5-17/h6,9-14,17,20H,3-5,7-8,15,29H2,1-2H3,(H,31,32,34)/t17-,20-" 
59N InChIKey         InChI                1.03  PJYRMGKJLXENCU-IRJFHVNHSA-N                                                                                                                                                                          
59N SMILES_CANONICAL CACTVS               3.385 "CCNc1ncc2C=C(C(=O)N(C[C@H]3CC[C@H](N)CC3)c2n1)c4ccc(cc4Cl)c5cncc(C)n5"                                                                                                                              
59N SMILES           CACTVS               3.385 "CCNc1ncc2C=C(C(=O)N(C[CH]3CC[CH](N)CC3)c2n1)c4ccc(cc4Cl)c5cncc(C)n5"                                                                                                                                
59N SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCNc1ncc2c(n1)N(C(=O)C(=C2)c3ccc(cc3Cl)c4cncc(n4)C)CC5CCC(CC5)N"                                                                                                                                    
59N SMILES           "OpenEye OEToolkits" 1.9.2 "CCNc1ncc2c(n1)N(C(=O)C(=C2)c3ccc(cc3Cl)c4cncc(n4)C)CC5CCC(CC5)N"                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
59N "SYSTEMATIC NAME" ACDLabs              12.01 "8-[(trans-4-aminocyclohexyl)methyl]-6-[2-chloro-4-(6-methylpyrazin-2-yl)phenyl]-2-(ethylamino)pyrido[2,3-d]pyrimidin-7(8H)-one" 
59N "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "8-[(4-azanylcyclohexyl)methyl]-6-[2-chloranyl-4-(6-methylpyrazin-2-yl)phenyl]-2-(ethylamino)pyrido[2,3-d]pyrimidin-7-one"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
59N "Create component" 2015-08-27 RCSB 
59N "Initial release"  2016-09-21 RCSB 
# 
