data_29N
# 
_chem_comp.id                                    29N 
_chem_comp.name                                  "1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H21 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         
;1,1',1''-(1,3,5-triazinane-1,3,5-triyl)triprop-2-en-1-one, bound form
;
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-09-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        255.313 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     29N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4MNX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
29N N1  N1  N 0 1 N N N N N N 25.638 19.292 -9.800  -1.368 -0.140 0.726  N1  29N 1  
29N C2  C2  C 0 1 N N N N N N 25.046 18.209 -10.518 -0.855 1.182  1.117  C2  29N 2  
29N N3  N3  N 0 1 N N N N N N 26.120 17.286 -10.728 0.562  1.255  0.729  N3  29N 3  
29N C4  C4  C 0 1 N N N N N N 26.614 16.664 -9.502  1.451  0.149  1.120  C4  29N 4  
29N N5  N5  N 0 1 N N N N N N 27.209 17.805 -8.780  0.806  -1.115 0.728  N5  29N 5  
29N C6  C6  C 0 1 N N N N N N 26.280 18.916 -8.544  -0.597 -1.331 1.117  C6  29N 6  
29N C7  C7  C 0 1 N N N N N N 25.678 20.669 -10.279 -2.518 -0.258 0.032  C7  29N 7  
29N C8  C8  C 0 1 N N N N N N 25.044 21.040 -11.576 -3.292 0.974  -0.359 C8  29N 8  
29N O9  O9  O 0 1 N N N N N N 26.230 21.539 -9.585  -2.929 -1.356 -0.278 O9  29N 9  
29N C10 C10 C 0 1 N N N N N N 28.608 17.984 -8.402  1.483  -2.050 0.032  C10 29N 10 
29N C11 C11 C 0 1 N N N N N N 29.704 16.983 -8.551  0.803  -3.337 -0.359 C11 29N 11 
29N O12 O12 O 0 1 N N N N N N 28.894 19.041 -7.862  2.638  -1.855 -0.279 O12 29N 12 
29N C13 C13 C 0 1 N N N N N N 26.776 17.207 -12.046 1.035  2.308  0.032  C13 29N 13 
29N C14 C14 C 0 1 N N N N N N 27.960 16.276 -12.267 2.490  2.363  -0.356 C14 29N 14 
29N O15 O15 O 0 1 N N N N N N 26.322 17.887 -12.991 0.289  3.211  -0.283 O15 29N 15 
29N C16 C16 C 0 1 N N N N N N 25.043 22.535 -11.721 -4.547 0.564  -1.133 C16 29N 16 
29N C19 C19 C 0 1 N N N N N N 31.009 17.627 -8.898  1.785  -4.216 -1.135 C19 29N 17 
29N C25 C25 C 0 1 N N N N N N 27.959 15.690 -13.662 2.763  3.652  -1.133 C25 29N 18 
29N H1  H1  H 0 1 N N N N N N 24.639 18.556 -11.479 -1.418 1.962  0.604  H1  29N 19 
29N H2  H2  H 0 1 N N N N N N 24.244 17.743 -9.927  -0.949 1.309  2.196  H2  29N 20 
29N H3  H3  H 0 1 N N N N N N 25.792 16.214 -8.926  2.408  0.247  0.609  H3  29N 21 
29N H4  H4  H 0 1 N N N N N N 27.370 15.896 -9.723  1.605  0.165  2.199  H4  29N 22 
29N H5  H5  H 0 1 N N N N N N 26.834 19.778 -8.144  -0.663 -1.474 2.195  H5  29N 23 
29N H6  H6  H 0 1 N N N N N N 25.513 18.604 -7.820  -0.990 -2.209 0.604  H6  29N 24 
29N H7  H7  H 0 1 N N N N N N 24.009 20.668 -11.598 -3.581 1.521  0.538  H7  29N 25 
29N H8  H8  H 0 1 N N N N N N 25.612 20.591 -12.404 -2.669 1.611  -0.988 H8  29N 26 
29N H9  H9  H 0 1 N N N N N N 29.433 16.277 -9.350  0.476  -3.862 0.539  H9  29N 27 
29N H10 H10 H 0 1 N N N N N N 29.818 16.438 -7.602  -0.061 -3.116 -0.985 H10 29N 28 
29N H11 H11 H 0 1 N N N N N N 27.910 15.456 -11.536 3.107  2.344  0.543  H11 29N 29 
29N H12 H12 H 0 1 N N N N N N 28.891 16.842 -12.119 2.733  1.503  -0.981 H12 29N 30 
29N H13 H13 H 0 1 N N N N N N 24.575 22.811 -12.678 -5.107 1.456  -1.416 H13 29N 31 
29N H14 H14 H 0 1 N N N N N N 24.475 22.983 -10.893 -4.257 0.018  -2.030 H14 29N 32 
29N H15 H15 H 0 1 N N N N N N 26.078 22.906 -11.699 -5.169 -0.072 -0.504 H15 29N 33 
29N H16 H16 H 0 1 N N N N N N 31.785 16.854 -8.998  2.112  -3.691 -2.032 H16 29N 34 
29N H17 H17 H 0 1 N N N N N N 30.908 18.170 -9.849  2.649  -4.437 -0.508 H17 29N 35 
29N H18 H18 H 0 1 N N N N N N 31.293 18.331 -8.102  1.294  -5.147 -1.418 H18 29N 36 
29N H19 H19 H 0 1 N N N N N N 28.827 15.025 -13.782 2.146  3.671  -2.032 H19 29N 37 
29N H20 H20 H 0 1 N N N N N N 27.034 15.116 -13.818 2.521  4.511  -0.508 H20 29N 38 
29N H21 H21 H 0 1 N N N N N N 28.015 16.503 -14.401 3.815  3.691  -1.414 H21 29N 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
29N C25 C14 SING N N 1  
29N O15 C13 DOUB N N 2  
29N C14 C13 SING N N 3  
29N C13 N3  SING N N 4  
29N C16 C8  SING N N 5  
29N C8  C7  SING N N 6  
29N N3  C2  SING N N 7  
29N N3  C4  SING N N 8  
29N C2  N1  SING N N 9  
29N C7  N1  SING N N 10 
29N C7  O9  DOUB N N 11 
29N N1  C6  SING N N 12 
29N C4  N5  SING N N 13 
29N C19 C11 SING N N 14 
29N N5  C6  SING N N 15 
29N N5  C10 SING N N 16 
29N C11 C10 SING N N 17 
29N C10 O12 DOUB N N 18 
29N C2  H1  SING N N 19 
29N C2  H2  SING N N 20 
29N C4  H3  SING N N 21 
29N C4  H4  SING N N 22 
29N C6  H5  SING N N 23 
29N C6  H6  SING N N 24 
29N C8  H7  SING N N 25 
29N C8  H8  SING N N 26 
29N C11 H9  SING N N 27 
29N C11 H10 SING N N 28 
29N C14 H11 SING N N 29 
29N C14 H12 SING N N 30 
29N C16 H13 SING N N 31 
29N C16 H14 SING N N 32 
29N C16 H15 SING N N 33 
29N C19 H16 SING N N 34 
29N C19 H17 SING N N 35 
29N C19 H18 SING N N 36 
29N C25 H19 SING N N 37 
29N C25 H20 SING N N 38 
29N C25 H21 SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
29N SMILES           ACDLabs              12.01 "O=C(N1CN(C(=O)CC)CN(C(=O)CC)C1)CC"                                                 
29N InChI            InChI                1.03  "InChI=1S/C12H21N3O3/c1-4-10(16)13-7-14(11(17)5-2)9-15(8-13)12(18)6-3/h4-9H2,1-3H3" 
29N InChIKey         InChI                1.03  AEPJNZPJFYDQLM-UHFFFAOYSA-N                                                         
29N SMILES_CANONICAL CACTVS               3.370 "CCC(=O)N1CN(CN(C1)C(=O)CC)C(=O)CC"                                                 
29N SMILES           CACTVS               3.370 "CCC(=O)N1CN(CN(C1)C(=O)CC)C(=O)CC"                                                 
29N SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCC(=O)N1CN(CN(C1)C(=O)CC)C(=O)CC"                                                 
29N SMILES           "OpenEye OEToolkits" 1.7.6 "CCC(=O)N1CN(CN(C1)C(=O)CC)C(=O)CC"                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
29N "SYSTEMATIC NAME" ACDLabs              12.01 "1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one" 
29N "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[3,5-di(propanoyl)-1,3,5-triazinan-1-yl]propan-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
29N "Create component" 2013-09-12 RCSB 
29N "Modify synonyms"  2014-01-03 RCSB 
29N "Initial release"  2014-02-05 RCSB 
29N "Modify synonyms"  2021-03-13 RCSB 
29N "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      29N 
_pdbx_chem_comp_synonyms.name         
;1,1',1''-(1,3,5-triazinane-1,3,5-triyl)triprop-2-en-1-one, bound form
;
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 29N CYS None Crosslinker "Amino-acid side chain" "Any position" C16 SG ? ? 
2 29N CYS None Crosslinker "Amino-acid side chain" "Any position" C19 SG ? ? 
3 29N CYS None Crosslinker "Amino-acid side chain" "Any position" C25 SG ? ? 
# 
