data_0KN
#

_chem_comp.id                                   0KN
_chem_comp.name                                 "(2R)-N-[(2S,3R)-1-(1,3-benzodioxol-5-yl)-4-{[(4'S)-6'-(2,2-dimethylpropyl)-3',4'-dihydrospiro[cyclobutane-1,2'-pyrano[2,3-b]pyridin]-4'-yl]amino}-3-hydroxybutan-2-yl]-2-methoxypropanamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H43 N3 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(2R)-N-((2S,3R)-1-(benzo[d][1,3]dioxol-5-yl)-3-hydroxy-4-((S)-6'-neopentyl-3',4'-dihydrospiro[cyclobutane-1,2'-pyrano[2,3-b]pyridine]-4'-ylamino)butan-2-yl)-2-methoxypropanamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-02-03
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       553.690
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    0KN
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4DH6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
0KN  C29  C29  C  0  1  N  N  N  62.946  44.332   9.404   4.173  -4.159  -2.273  C29  0KN   1  
0KN  C30  C30  C  0  1  N  N  N  61.421  44.475   9.292   3.003  -4.917  -1.621  C30  0KN   2  
0KN  C31  C31  C  0  1  N  N  N  61.539  45.982   9.536   3.262  -4.077  -0.358  C31  0KN   3  
0KN  C18  C18  C  0  1  N  N  N  63.078  45.855   9.544   3.879  -3.024  -1.286  C18  0KN   4  
0KN  C19  C19  C  0  1  N  N  N  63.748  46.482   8.309   2.868  -2.002  -1.809  C19  0KN   5  
0KN  O17  O17  O  0  1  N  N  N  63.712  46.225  10.786   5.043  -2.398  -0.756  O17  0KN   6  
0KN  C16  C16  C  0  1  Y  N  N  63.957  47.561  10.973   4.859  -1.332   0.066  C16  0KN   7  
0KN  N23  N23  N  0  1  Y  N  N  64.160  47.984  12.239   5.890  -0.920   0.795  N23  0KN   8  
0KN  C22  C22  C  0  1  Y  N  N  64.410  49.254  12.530   5.802   0.108   1.613  C22  0KN   9  
0KN  C21  C21  C  0  1  Y  N  N  64.472  50.210  11.516   4.618   0.806   1.744  C21  0KN  10  
0KN  C24  C24  C  0  1  N  N  N  64.758  51.682  11.859   4.525   1.984   2.680  C24  0KN  11  
0KN  C25  C25  C  0  1  N  N  N  63.528  52.443  12.377   4.979   3.250   1.951  C25  0KN  12  
0KN  C27  C27  C  0  1  N  N  N  63.975  53.774  12.978   4.015   3.552   0.803  C27  0KN  13  
0KN  C28  C28  C  0  1  N  N  N  62.777  51.649  13.451   4.990   4.426   2.930  C28  0KN  14  
0KN  C26  C26  C  0  1  N  N  N  62.570  52.739  11.218   6.388   3.040   1.392  C26  0KN  15  
0KN  C20  C20  C  0  1  Y  N  N  64.275  49.812  10.191   3.515   0.408   1.004  C20  0KN  16  
0KN  C15  C15  C  0  1  Y  N  N  64.019  48.471   9.905   3.639  -0.681   0.154  C15  0KN  17  
0KN  C6   C6   C  0  1  N  N  S  63.794  48.016   8.436   2.434  -1.120  -0.635  C6   0KN  18  
0KN  N5   N5   N  0  1  N  N  N  64.816  48.571   7.512   1.730   0.063  -1.148  N5   0KN  19  
0KN  C4   C4   C  0  1  N  N  N  66.225  48.306   7.890   0.486   0.301  -0.403  C4   0KN  20  
0KN  C3   C3   C  0  1  N  N  R  67.126  49.291   7.144  -0.644  -0.523  -1.023  C3   0KN  21  
0KN  O14  O14  O  0  1  N  N  N  66.741  50.617   7.505  -0.320  -1.912  -0.944  O14  0KN  22  
0KN  C2   C2   C  0  1  N  N  S  68.620  49.103   7.445  -1.944  -0.258  -0.261  C2   0KN  23  
0KN  N1   N1   N  0  1  N  N  N  69.108  47.760   7.105  -2.329   1.146  -0.423  N1   0KN  24  
0KN  C35  C35  C  0  1  N  N  N  69.386  46.836   8.023  -2.566   1.642  -1.653  C35  0KN  25  
0KN  O36  O36  O  0  1  N  N  N  69.166  46.962   9.229  -2.557   0.905  -2.616  O36  0KN  26  
0KN  C37  C37  C  0  1  N  N  R  69.927  45.508   7.516  -2.842   3.113  -1.832  C37  0KN  27  
0KN  C38  C38  C  0  1  N  N  N  71.450  45.593   7.367  -1.576   3.912  -1.518  C38  0KN  28  
0KN  O39  O39  O  0  1  N  N  N  69.505  44.501   8.445  -3.240   3.362  -3.182  O39  0KN  29  
0KN  C40  C40  C  0  1  N  N  N  68.302  43.877   7.960  -4.211   4.401  -3.320  C40  0KN  30  
0KN  C7   C7   C  0  1  N  N  N  69.512  50.072   6.655  -3.052  -1.157  -0.814  C7   0KN  31  
0KN  C8   C8   C  0  1  Y  N  N  70.947  49.895   7.139  -4.299  -0.987   0.015  C8   0KN  32  
0KN  C9   C9   C  0  1  Y  N  N  71.980  49.549   6.272  -4.508  -1.791   1.119  C9   0KN  33  
0KN  C10  C10  C  0  1  Y  N  N  73.268  49.403   6.797  -5.654  -1.637   1.883  C10  0KN  34  
0KN  O32  O32  O  0  1  N  N  N  74.452  49.081   6.202  -6.093  -2.289   2.999  O32  0KN  35  
0KN  C33  C33  C  0  1  N  N  N  75.283  48.635   7.306  -7.108  -1.439   3.566  C33  0KN  36  
0KN  O34  O34  O  0  1  N  N  N  74.830  49.393   8.436  -7.620  -0.714   2.432  O34  0KN  37  
0KN  C11  C11  C  0  1  Y  N  N  73.514  49.594   8.167  -6.593  -0.668   1.535  C11  0KN  38  
0KN  C12  C12  C  0  1  Y  N  N  72.480  49.932   9.015  -6.376   0.134   0.427  C12  0KN  39  
0KN  C13  C13  C  0  1  Y  N  N  71.203  50.081   8.493  -5.228  -0.022  -0.327  C13  0KN  40  
0KN  H1   H1   H  0  1  N  N  N  63.281  43.769  10.288   5.142  -4.633  -2.117  H1   0KN  41  
0KN  H2   H2   H  0  1  N  N  N  63.426  43.920   8.504   3.995  -3.890  -3.314  H2   0KN  42  
0KN  H3   H3   H  0  1  N  N  N  61.017  44.211   8.303   2.039  -4.718  -2.088  H3   0KN  43  
0KN  H4   H4   H  0  1  N  N  N  60.862  43.937  10.072   3.196  -5.982  -1.484  H4   0KN  44  
0KN  H5   H5   H  0  1  N  N  N  61.143  46.602   8.718   2.351  -3.742   0.138  H5   0KN  45  
0KN  H6   H6   H  0  1  N  N  N  61.110  46.318  10.492   3.978  -4.528   0.328  H6   0KN  46  
0KN  H7   H7   H  0  1  N  N  N  63.175  46.211   7.410   3.332  -1.387  -2.580  H7   0KN  47  
0KN  H8   H8   H  0  1  N  N  N  64.774  46.096   8.220   2.001  -2.519  -2.221  H8   0KN  48  
0KN  H9   H9   H  0  1  N  N  N  64.566  49.549  13.557   6.665   0.409   2.188  H9   0KN  49  
0KN  H10  H10  H  0  1  N  N  N  65.538  51.713  12.634   3.494   2.105   3.010  H10  0KN  50  
0KN  H11  H11  H  0  1  N  N  N  65.122  52.186  10.952   5.167   1.813   3.544  H11  0KN  51  
0KN  H12  H12  H  0  1  N  N  N  64.665  53.586  13.814   3.029   3.780   1.207  H12  0KN  52  
0KN  H13  H13  H  0  1  N  N  N  64.486  54.371  12.208   4.381   4.407   0.235  H13  0KN  53  
0KN  H14  H14  H  0  1  N  N  N  63.096  54.324  13.345   3.946   2.683   0.148  H14  0KN  54  
0KN  H15  H15  H  0  1  N  N  N  63.456  51.431  14.288   5.609   4.176   3.792  H15  0KN  55  
0KN  H16  H16  H  0  1  N  N  N  61.924  52.241  13.815   5.396   5.308   2.435  H16  0KN  56  
0KN  H17  H17  H  0  1  N  N  N  62.411  50.705  13.020   3.973   4.632   3.262  H17  0KN  57  
0KN  H18  H18  H  0  1  N  N  N  61.693  53.284  11.597   6.380   2.202   0.694  H18  0KN  58  
0KN  H19  H19  H  0  1  N  N  N  63.085  53.353  10.464   6.712   3.942   0.873  H19  0KN  59  
0KN  H20  H20  H  0  1  N  N  N  62.245  51.793  10.761   7.075   2.825   2.210  H20  0KN  60  
0KN  H21  H21  H  0  1  N  N  N  64.321  50.538   9.393   2.576   0.936   1.087  H21  0KN  61  
0KN  H22  H22  H  0  1  N  N  N  62.811  48.400   8.125   1.763  -1.684   0.013  H22  0KN  62  
0KN  H23  H23  H  0  1  N  N  N  64.689  49.562   7.470   1.548  -0.025  -2.136  H23  0KN  63  
0KN  H25  H25  H  0  1  N  N  N  66.495  47.276   7.614   0.624   0.004   0.637  H25  0KN  64  
0KN  H26  H26  H  0  1  N  N  N  66.349  48.440   8.975   0.232   1.359  -0.448  H26  0KN  65  
0KN  H27  H27  H  0  1  N  N  N  66.974  49.145   6.064  -0.771  -0.238  -2.067  H27  0KN  66  
0KN  H28  H28  H  0  1  N  N  N  65.817  50.740   7.321  -0.193  -2.236  -0.042  H28  0KN  67  
0KN  H29  H29  H  0  1  N  N  N  68.781  49.284   8.518  -1.796  -0.475   0.797  H29  0KN  68  
0KN  H30  H30  H  0  1  N  N  N  69.237  47.529   6.141  -2.412   1.719   0.356  H30  0KN  69  
0KN  H31  H31  H  0  1  N  N  N  69.491  45.307   6.526  -3.641   3.417  -1.156  H31  0KN  70  
0KN  H32  H32  H  0  1  N  N  N  71.837  44.631   7.000  -0.804   3.672  -2.249  H32  0KN  71  
0KN  H33  H33  H  0  1  N  N  N  71.704  46.388   6.650  -1.799   4.978  -1.562  H33  0KN  72  
0KN  H34  H34  H  0  1  N  N  N  71.902  45.822   8.344  -1.223   3.655  -0.519  H34  0KN  73  
0KN  H35  H35  H  0  1  N  N  N  67.977  43.104   8.672  -4.395   4.589  -4.378  H35  0KN  74  
0KN  H36  H36  H  0  1  N  N  N  67.512  44.635   7.856  -5.141   4.096  -2.838  H36  0KN  75  
0KN  H37  H37  H  0  1  N  N  N  68.498  43.415   6.981  -3.839   5.311  -2.848  H37  0KN  76  
0KN  H38  H38  H  0  1  N  N  N  69.184  51.107   6.830  -3.262  -0.880  -1.847  H38  0KN  77  
0KN  H39  H39  H  0  1  N  N  N  69.450  49.844   5.581  -2.729  -2.197  -0.775  H39  0KN  78  
0KN  H40  H40  H  0  1  N  N  N  71.791  49.397   5.220  -3.779  -2.541   1.387  H40  0KN  79  
0KN  H41  H41  H  0  1  N  N  N  75.147  47.558   7.483  -7.895  -2.037   4.025  H41  0KN  80  
0KN  H42  H42  H  0  1  N  N  N  76.344  48.842   7.101  -6.671  -0.754   4.293  H42  0KN  81  
0KN  H43  H43  H  0  1  N  N  N  72.662  50.078  10.069  -7.103   0.886   0.154  H43  0KN  82  
0KN  H44  H44  H  0  1  N  N  N  70.390  50.347   9.153  -5.058   0.608  -1.188  H44  0KN  83  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
0KN  O32  C10  SING  N  N   1  
0KN  O32  C33  SING  N  N   2  
0KN  C9   C10  DOUB  Y  N   3  
0KN  C9   C8   SING  Y  N   4  
0KN  C7   C8   SING  N  N   5  
0KN  C7   C2   SING  N  N   6  
0KN  C10  C11  SING  Y  N   7  
0KN  N1   C2   SING  N  N   8  
0KN  N1   C35  SING  N  N   9  
0KN  C8   C13  DOUB  Y  N  10  
0KN  C3   C2   SING  N  N  11  
0KN  C3   O14  SING  N  N  12  
0KN  C3   C4   SING  N  N  13  
0KN  C33  O34  SING  N  N  14  
0KN  C38  C37  SING  N  N  15  
0KN  N5   C4   SING  N  N  16  
0KN  N5   C6   SING  N  N  17  
0KN  C37  C35  SING  N  N  18  
0KN  C37  O39  SING  N  N  19  
0KN  C40  O39  SING  N  N  20  
0KN  C35  O36  DOUB  N  N  21  
0KN  C11  O34  SING  N  N  22  
0KN  C11  C12  DOUB  Y  N  23  
0KN  C19  C6   SING  N  N  24  
0KN  C19  C18  SING  N  N  25  
0KN  C6   C15  SING  N  N  26  
0KN  C13  C12  SING  Y  N  27  
0KN  C30  C29  SING  N  N  28  
0KN  C30  C31  SING  N  N  29  
0KN  C29  C18  SING  N  N  30  
0KN  C31  C18  SING  N  N  31  
0KN  C18  O17  SING  N  N  32  
0KN  C15  C20  DOUB  Y  N  33  
0KN  C15  C16  SING  Y  N  34  
0KN  C20  C21  SING  Y  N  35  
0KN  O17  C16  SING  N  N  36  
0KN  C16  N23  DOUB  Y  N  37  
0KN  C26  C25  SING  N  N  38  
0KN  C21  C24  SING  N  N  39  
0KN  C21  C22  DOUB  Y  N  40  
0KN  C24  C25  SING  N  N  41  
0KN  N23  C22  SING  Y  N  42  
0KN  C25  C27  SING  N  N  43  
0KN  C25  C28  SING  N  N  44  
0KN  C29  H1   SING  N  N  45  
0KN  C29  H2   SING  N  N  46  
0KN  C30  H3   SING  N  N  47  
0KN  C30  H4   SING  N  N  48  
0KN  C31  H5   SING  N  N  49  
0KN  C31  H6   SING  N  N  50  
0KN  C19  H7   SING  N  N  51  
0KN  C19  H8   SING  N  N  52  
0KN  C22  H9   SING  N  N  53  
0KN  C24  H10  SING  N  N  54  
0KN  C24  H11  SING  N  N  55  
0KN  C27  H12  SING  N  N  56  
0KN  C27  H13  SING  N  N  57  
0KN  C27  H14  SING  N  N  58  
0KN  C28  H15  SING  N  N  59  
0KN  C28  H16  SING  N  N  60  
0KN  C28  H17  SING  N  N  61  
0KN  C26  H18  SING  N  N  62  
0KN  C26  H19  SING  N  N  63  
0KN  C26  H20  SING  N  N  64  
0KN  C20  H21  SING  N  N  65  
0KN  C6   H22  SING  N  N  66  
0KN  N5   H23  SING  N  N  67  
0KN  C4   H25  SING  N  N  68  
0KN  C4   H26  SING  N  N  69  
0KN  C3   H27  SING  N  N  70  
0KN  O14  H28  SING  N  N  71  
0KN  C2   H29  SING  N  N  72  
0KN  N1   H30  SING  N  N  73  
0KN  C37  H31  SING  N  N  74  
0KN  C38  H32  SING  N  N  75  
0KN  C38  H33  SING  N  N  76  
0KN  C38  H34  SING  N  N  77  
0KN  C40  H35  SING  N  N  78  
0KN  C40  H36  SING  N  N  79  
0KN  C40  H37  SING  N  N  80  
0KN  C7   H38  SING  N  N  81  
0KN  C7   H39  SING  N  N  82  
0KN  C9   H40  SING  N  N  83  
0KN  C33  H41  SING  N  N  84  
0KN  C33  H42  SING  N  N  85  
0KN  C12  H43  SING  N  N  86  
0KN  C13  H44  SING  N  N  87  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
0KN  SMILES            ACDLabs               12.01  "O=C(NC(Cc2ccc1OCOc1c2)C(O)CNC4c3c(ncc(c3)CC(C)(C)C)OC5(C4)CCC5)C(OC)C"  
0KN  InChI             InChI                 1.03   "InChI=1S/C31H43N3O6/c1-19(37-5)28(36)34-23(12-20-7-8-26-27(13-20)39-18-38-26)25(35)17-32-24-15-31(9-6-10-31)40-29-22(24)11-21(16-33-29)14-30(2,3)4/h7-8,11,13,16,19,23-25,32,35H,6,9-10,12,14-15,17-18H2,1-5H3,(H,34,36)/t19-,23+,24+,25-/m1/s1"  
0KN  InChIKey          InChI                 1.03   OMMVFRZSBCRMQD-LJYZBVLISA-N  
0KN  SMILES_CANONICAL  CACTVS                3.370  "CO[C@H](C)C(=O)N[C@@H](Cc1ccc2OCOc2c1)[C@H](O)CN[C@H]3CC4(CCC4)Oc5ncc(CC(C)(C)C)cc35"  
0KN  SMILES            CACTVS                3.370  "CO[CH](C)C(=O)N[CH](Cc1ccc2OCOc2c1)[CH](O)CN[CH]3CC4(CCC4)Oc5ncc(CC(C)(C)C)cc35"  
0KN  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@H](C(=O)N[C@@H](Cc1ccc2c(c1)OCO2)[C@@H](CN[C@H]3CC4(CCC4)Oc5c3cc(cn5)CC(C)(C)C)O)OC"  
0KN  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(C(=O)NC(Cc1ccc2c(c1)OCO2)C(CNC3CC4(CCC4)Oc5c3cc(cn5)CC(C)(C)C)O)OC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
0KN  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R)-N-[(2S,3R)-1-(1,3-benzodioxol-5-yl)-4-{[(4'S)-6'-(2,2-dimethylpropyl)-3',4'-dihydrospiro[cyclobutane-1,2'-pyrano[2,3-b]pyridin]-4'-yl]amino}-3-hydroxybutan-2-yl]-2-methoxypropanamide"  
0KN  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R)-N-[(2S,3R)-1-(1,3-benzodioxol-5-yl)-4-[[(4S)-6-(2,2-dimethylpropyl)spiro[3,4-dihydropyrano[2,3-b]pyridine-2,1'-cyclobutane]-4-yl]amino]-3-oxidanyl-butan-2-yl]-2-methoxy-propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
0KN  "Create component"  2012-02-03  RCSB  
0KN  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     0KN
_pdbx_chem_comp_synonyms.name        "(2R)-N-((2S,3R)-1-(benzo[d][1,3]dioxol-5-yl)-3-hydroxy-4-((S)-6'-neopentyl-3',4'-dihydrospiro[cyclobutane-1,2'-pyrano[2,3-b]pyridine]-4'-ylamino)butan-2-yl)-2-methoxypropanamide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
