data_00N
# 
_chem_comp.id                                    00N 
_chem_comp.name                                  
;(1S,7S)-7-amino-7-benzyl-N-{(1S)-4-carbamimidamido-1-[(S)-hydroxy(1,3-thiazol-2-yl)methyl]butyl}-8-oxohexahydro-1H-pyra
zolo[1,2-a]pyridazine-1-carboxamide
;
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H34 N8 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         MOL-127 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-10-28 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        514.644 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     00N 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1A61 
_chem_comp.pdbx_subcomponent_list                "00U 00Y" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
00N C1   C1   C 0 1 N N S N N N 17.712 -13.019 21.153 -0.594 0.521  -1.723 C1   00U 1  
00N N1   N1   N 0 1 N N N N N N 18.710 -15.214 21.063 -2.739 1.400  -1.891 N1   00U 2  
00N O1   O1   O 0 1 N N N N N N 16.022 -14.022 23.236 -1.718 -1.281 0.097  O1   00U 3  
00N C2   C2   C 0 1 N N N N N N 18.636 -13.209 20.003 -0.582 1.624  -2.808 C2   00U 4  
00N N2   N2   N 0 1 N N N N N N 17.688 -14.422 21.728 -1.993 0.425  -1.275 N2   00U 5  
00N O2   O2   O 0 1 N N N N N N 15.956 -13.992 19.799 -0.179 1.093  0.528  O2   00U 6  
00N C3   C3   C 0 1 N N N N N N 19.696 -14.192 20.721 -2.087 1.684  -3.193 C3   00U 7  
00N N3   N3   N 0 1 N N N N N N 15.586 -16.555 23.345 -4.073 -0.399 1.406  N3   00U 8  
00N C4   C4   C 0 1 N N N N N N 19.063 -16.486 21.710 -4.112 0.917  -2.091 C4   00U 9  
00N C5   C5   C 0 1 N N N N N N 17.949 -17.091 22.595 -4.721 0.579  -0.731 C5   00U 10 
00N C6   C6   C 0 1 N N S N N N 17.012 -16.167 23.324 -3.934 -0.535 -0.050 C6   00U 11 
00N C7   C7   C 0 1 N N N N N N 16.912 -14.778 22.714 -2.478 -0.482 -0.408 C7   00U 12 
00N C8   C8   C 0 1 N N N N N N 16.445 -12.993 20.509 0.297  0.909  -0.572 C8   00U 13 
00N C9   C9   C 0 1 N N N N N N 17.672 -16.278 24.800 -4.506 -1.886 -0.482 C9   00U 14 
00N C10  C10  C 0 1 Y N N N N N 19.037 -15.615 25.165 -3.816 -2.990 0.279  C10  00U 15 
00N C11  C11  C 0 1 Y N N N N N 19.355 -14.288 25.428 -4.329 -3.420 1.488  C11  00U 16 
00N C12  C12  C 0 1 Y N N N N N 20.708 -13.943 25.740 -3.696 -4.432 2.186  C12  00U 17 
00N C13  C13  C 0 1 Y N N N N N 21.744 -14.883 25.723 -2.551 -5.013 1.675  C13  00U 18 
00N C14  C14  C 0 1 Y N N N N N 21.383 -16.210 25.473 -2.039 -4.583 0.465  C14  00U 19 
00N C15  C15  C 0 1 Y N N N N N 20.069 -16.597 25.135 -2.674 -3.575 -0.235 C15  00U 20 
00N C    C    C 0 1 N N S N N N 14.335 -10.594 18.750 2.495  2.953  0.504  C    00Y 21 
00N N    N    N 0 1 N N N N N N 15.326 -12.068 20.552 1.623  1.053  -0.765 N    00Y 22 
00N O    O    O 0 1 N N N N N N 13.431 -10.002 18.122 3.340  3.322  1.596  O    00Y 23 
00N CA   CA   C 0 1 N N S N N N 14.145 -11.348 20.042 2.489  1.431  0.355  CA   00Y 24 
00N CB   CB   C 0 1 N N N N N N 13.179 -10.750 21.051 3.913  0.939  0.086  CB   00Y 25 
00N CD   CD   C 0 1 N N N N N N 11.834 -11.271 23.049 5.353  -1.082 -0.207 CD   00Y 26 
00N NE   NE   N 0 1 N N N N N N 11.395 -12.304 23.970 5.367  -2.546 -0.231 NE   00Y 27 
00N CG   CG   C 0 1 N N N N N N 12.756 -11.850 21.999 3.929  -0.590 0.061  CG   00Y 28 
00N CZ   CZ   C 0 1 N N N N N N 10.532 -12.093 24.979 6.545  -3.218 -0.458 CZ   00Y 29 
00N C1X  C1X  C 0 1 Y N N N N N 15.243 -11.134 17.601 1.092  3.437  0.768  C1X  00Y 30 
00N N1X  N1X  N 0 1 Y N N N N N 16.619 -10.961 17.463 0.341  4.031  -0.096 N1X  00Y 31 
00N S1X  S1X  S 0 1 Y N N N N N 14.877 -12.062 16.105 0.264  3.272  2.255  S1X  00Y 32 
00N C2X  C2X  C 0 1 Y N N N N N 17.427 -11.397 16.370 -0.863 4.390  0.301  C2X  00Y 33 
00N C3X  C3X  C 0 1 Y N N N N N 16.537 -11.999 15.541 -1.144 4.080  1.571  C3X  00Y 34 
00N NH1  NH1  N 0 1 N N N N N N 10.213 -10.773 25.085 6.559  -4.521 -0.479 NH1  00Y 35 
00N NH2  NH2  N 0 1 N N N N N N 9.529  -12.989 25.203 7.709  -2.516 -0.661 NH2  00Y 36 
00N H1   H1   H 0 1 N N N N N N 17.942 -12.187 21.834 -0.268 -0.429 -2.148 H1   00U 37 
00N H2   H2   H 0 1 N N N N N N 18.152 -13.656 19.122 -0.245 2.575  -2.397 H2   00U 38 
00N H2A  H2A  H 0 1 N N N N N N 19.084 -12.271 19.642 0.029  1.329  -3.661 H2A  00U 39 
00N H3   H3   H 0 1 N N N N N N 20.511 -14.541 20.070 -2.332 0.919  -3.929 H3   00U 40 
00N H3A  H3A  H 0 1 N N N N N N 20.218 -13.752 21.584 -2.357 2.675  -3.558 H3A  00U 41 
00N HN3  HN3  H 0 1 N N N N N N 15.062 -15.872 23.854 -3.562 -1.123 1.888  HN3  00U 42 
00N HN3A HN3A H 0 0 N N N N N N 15.242 -16.609 22.408 -3.780 0.516  1.714  HN3A 00U 43 
00N H4   H4   H 0 1 N N N N N N 19.294 -17.213 20.918 -4.705 1.694  -2.574 H4   00U 44 
00N H4A  H4A  H 0 1 N N N N N N 19.939 -16.305 22.350 -4.097 0.025  -2.717 H4A  00U 45 
00N H5   H5   H 0 1 N N N N N N 17.324 -17.706 21.930 -4.706 1.467  -0.100 H5   00U 46 
00N H5A  H5A  H 0 1 N N N N N N 18.456 -17.690 23.366 -5.753 0.255  -0.870 H5A  00U 47 
00N H9   H9   H 0 1 N N N N N N 16.938 -15.823 25.481 -5.575 -1.913 -0.271 H9   00U 48 
00N H9A  H9A  H 0 1 N N N N N N 17.817 -17.355 24.972 -4.343 -2.025 -1.551 H9A  00U 49 
00N H11  H11  H 0 1 N N N N N N 18.590 -13.526 25.397 -5.223 -2.966 1.888  H11  00U 50 
00N H12  H12  H 0 1 N N N N N N 20.938 -12.920 25.998 -4.097 -4.768 3.131  H12  00U 51 
00N H13  H13  H 0 1 N N N N N N 22.771 -14.598 25.894 -2.057 -5.804 2.220  H13  00U 52 
00N H14  H14  H 0 1 N N N N N N 22.144 -16.973 25.542 -1.144 -5.037 0.066  H14  00U 53 
00N H15  H15  H 0 1 N N N N N N 19.850 -17.618 24.859 -2.276 -3.242 -1.183 H15  00U 54 
00N HN   HN   H 0 1 N N N N N N 15.402 -11.701 21.479 2.004  0.906  -1.644 HN   00Y 55 
00N HA   HA   H 0 1 N N N N N N 13.531 -12.202 19.719 2.116  0.977  1.273  HA   00Y 56 
00N HB   HB   H 0 1 N N N N N N 13.672 -9.941  21.610 4.254  1.322  -0.876 HB   00Y 57 
00N HBA  HBA  H 0 1 N N N N N N 12.299 -10.341 20.533 4.576  1.296  0.875  HBA  00Y 58 
00N HD   HD   H 0 1 N N N N N N 10.955 -10.833 22.554 6.015  -0.724 0.581  HD   00Y 59 
00N HDA  HDA  H 0 1 N N N N N N 12.372 -10.493 23.611 5.694  -0.699 -1.169 HDA  00Y 60 
00N HNE  HNE  H 0 1 N N N N N N 11.756 -13.228 23.846 4.546  -3.042 -0.088 HNE  00Y 61 
00N HG   HG   H 0 1 N N N N N N 12.230 -12.637 21.439 3.588  -0.973 1.023  HG   00Y 62 
00N HGA  HGA  H 0 1 N N N N N N 13.644 -12.280 22.485 3.266  -0.947 -0.727 HGA  00Y 63 
00N H2X  H2X  H 0 1 N N N N N N 18.492 -11.277 16.235 -1.567 4.893  -0.347 H2X  00Y 64 
00N H3X  H3X  H 0 1 N N N N N N 16.833 -12.415 14.589 -2.071 4.285  2.085  H3X  00Y 65 
00N HNH1 HNH1 H 0 0 N N N N N N 9.251  -10.638 25.321 7.390  -4.995 -0.639 HNH1 00Y 66 
00N HNH2 HNH2 H 0 0 N N N N N N 8.611  -12.665 25.433 7.700  -1.546 -0.645 HNH2 00Y 67 
00N HNHA HNHA H 0 0 N N N N N N 9.711  -13.970 25.138 8.541  -2.990 -0.820 HNHA 00Y 68 
00N H33  H33  H 0 1 N Y N N N N 14.828 -9.908  19.454 2.869  3.407  -0.414 H33  00Y 69 
00N H34  H34  H 0 1 N N N N N N 13.796 -9.603  17.341 3.066  2.953  2.447  H34  00Y 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
00N C   CA   SING N N 1  
00N N   HN   SING N N 2  
00N O   C    SING N N 3  
00N C1  N2   SING N N 4  
00N C1  H1   SING N N 5  
00N N1  C4   SING N N 6  
00N N1  N2   SING N N 7  
00N C2  C1   SING N N 8  
00N C2  C3   SING N N 9  
00N C2  H2   SING N N 10 
00N C2  H2A  SING N N 11 
00N N2  C7   SING N N 12 
00N O2  C8   DOUB N N 13 
00N C3  N1   SING N N 14 
00N C3  H3   SING N N 15 
00N C3  H3A  SING N N 16 
00N N3  HN3  SING N N 17 
00N N3  HN3A SING N N 18 
00N C4  C5   SING N N 19 
00N C4  H4   SING N N 20 
00N C4  H4A  SING N N 21 
00N C5  C6   SING N N 22 
00N C5  H5   SING N N 23 
00N C5  H5A  SING N N 24 
00N C6  N3   SING N N 25 
00N C6  C9   SING N N 26 
00N C7  O1   DOUB N N 27 
00N C7  C6   SING N N 28 
00N C8  N    SING N N 29 
00N C8  C1   SING N N 30 
00N C9  C10  SING N N 31 
00N C9  H9   SING N N 32 
00N C9  H9A  SING N N 33 
00N CA  N    SING N N 34 
00N CA  CB   SING N N 35 
00N CA  HA   SING N N 36 
00N CB  CG   SING N N 37 
00N CB  HB   SING N N 38 
00N CB  HBA  SING N N 39 
00N CD  NE   SING N N 40 
00N CD  HD   SING N N 41 
00N CD  HDA  SING N N 42 
00N NE  CZ   SING N N 43 
00N NE  HNE  SING N N 44 
00N CG  CD   SING N N 45 
00N CG  HG   SING N N 46 
00N CG  HGA  SING N N 47 
00N CZ  NH1  DOUB N N 48 
00N CZ  NH2  SING N N 49 
00N C10 C11  SING Y N 50 
00N C11 C12  DOUB Y N 51 
00N C11 H11  SING N N 52 
00N C12 H12  SING N N 53 
00N C13 C12  SING Y N 54 
00N C13 H13  SING N N 55 
00N C14 C13  DOUB Y N 56 
00N C14 H14  SING N N 57 
00N C15 C10  DOUB Y N 58 
00N C15 C14  SING Y N 59 
00N C15 H15  SING N N 60 
00N C1X C    SING N N 61 
00N N1X C1X  DOUB Y N 62 
00N S1X C1X  SING Y N 63 
00N C2X N1X  SING Y N 64 
00N C2X H2X  SING N N 65 
00N C3X S1X  SING Y N 66 
00N C3X C2X  DOUB Y N 67 
00N C3X H3X  SING N N 68 
00N NH1 HNH1 SING N N 69 
00N NH2 HNH2 SING N N 70 
00N NH2 HNHA SING N N 71 
00N C   H33  SING N N 72 
00N O   H34  SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
00N SMILES           ACDLabs              12.01 "O=C3N1N(CCC1C(=O)NC(C(O)c2nccs2)CCCNC(=[N@H])N)CCC3(N)Cc4ccccc4"                                                                                                                                                                  
00N SMILES_CANONICAL CACTVS               3.370 "NC(=N)NCCC[C@H](NC(=O)[C@@H]1CCN2CC[C@@](N)(Cc3ccccc3)C(=O)N12)[C@H](O)c4sccn4"                                                                                                                                                   
00N SMILES           CACTVS               3.370 "NC(=N)NCCC[CH](NC(=O)[CH]1CCN2CC[C](N)(Cc3ccccc3)C(=O)N12)[CH](O)c4sccn4"                                                                                                                                                         
00N SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)C[C@@]2(CC[N@@]3CC[C@H](N3C2=O)C(=O)N[C@@H](CCCNC(=N)N)[C@@H](c4nccs4)O)N"                                                                                                                                              
00N SMILES           "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)CC2(CCN3CCC(N3C2=O)C(=O)NC(CCCNC(=N)N)C(c4nccs4)O)N"                                                                                                                                                                    
00N InChI            InChI                1.03  "InChI=1S/C24H34N8O3S/c25-23(26)29-10-4-7-17(19(33)21-28-11-14-36-21)30-20(34)18-8-12-31-13-9-24(27,22(35)32(18)31)15-16-5-2-1-3-6-16/h1-3,5-6,11,14,17-19,33H,4,7-10,12-13,15,27H2,(H,30,34)(H4,25,26,29)/t17-,18-,19-,24+/m0/s1" 
00N InChIKey         InChI                1.03  LWWRAASQNZOVDU-GSRZOBFVSA-N                                                                                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
00N "SYSTEMATIC NAME" ACDLabs              12.01 "(1S,7S)-7-amino-7-benzyl-N-[(1S,2S)-5-carbamimidamido-1-hydroxy-1-(1,3-thiazol-2-yl)pentan-2-yl]-8-oxohexahydro-1H-pyrazolo[1,2-a]pyridazine-1-carboxamide"                       
00N "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(3S,6S,9S)-6-azanyl-N-[(1S,2S)-5-carbamimidamido-1-hydroxy-1-(1,3-thiazol-2-yl)pentan-2-yl]-5-oxo-6-(phenylmethyl)-2,3,7,8-tetrahydro-1H-pyrazolo[1,2-a]pyridazine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
00N "Create component"         2010-10-28 RCSB 
00N "Modify subcomponent list" 2010-11-12 RCSB 
00N "Modify aromatic_flag"     2011-06-04 RCSB 
00N "Modify descriptor"        2011-06-04 RCSB 
00N "Modify synonyms"          2020-06-05 PDBE 
00N "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      00N 
_pdbx_chem_comp_synonyms.name         MOL-127 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            00N 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
