data_UYM
#

_chem_comp.id                                   UYM
_chem_comp.name                                 "(3S,6S)-3,6-bis[(1H-indol-3-yl)methyl]piperazine-2,5-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H20 N4 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-05
_chem_comp.pdbx_modified_date                   2021-06-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       372.420
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    UYM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XAK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UYM  N    N1   N  0  1  Y  N  N  -18.719  40.004  -21.316   4.992   1.834  -0.493  N    UYM   1  
UYM  C    C1   C  0  1  N  N  N  -21.329  34.844  -21.295  -0.452   1.340   1.574  C    UYM   2  
UYM  O    O1   O  0  1  N  N  N  -20.867  34.073  -22.091  -0.830   2.476   1.767  O    UYM   3  
UYM  C1   C2   C  0  1  N  N  S  -20.969  36.331  -21.427   1.009   1.100   1.341  C1   UYM   4  
UYM  C10  C3   C  0  1  Y  N  N  -17.493  40.492  -23.621   5.880  -0.481  -1.057  C10  UYM   5  
UYM  C11  C4   C  0  1  N  N  S  -22.838  35.177  -19.230  -1.001  -1.041   1.361  C11  UYM   6  
UYM  C12  C5   C  0  1  N  N  N  -22.336  34.832  -17.798  -1.336  -1.430  -0.081  C12  UYM   7  
UYM  C15  C6   C  0  1  N  N  N  -22.583  36.673  -19.448   0.461  -1.277   1.605  C15  UYM   8  
UYM  C2   C7   C  0  1  N  N  N  -19.460  36.522  -21.232   1.350   1.450  -0.109  C2   UYM   9  
UYM  C3   C8   C  0  1  Y  N  N  -19.002  37.993  -21.561   2.837   1.329  -0.319  C3   UYM  10  
UYM  C34  C9   C  0  1  Y  N  N  -20.771  34.793  -17.624  -2.825  -1.334  -0.293  C34  UYM  11  
UYM  C35  C10  C  0  1  Y  N  N  -20.190  33.686  -17.826  -3.713  -2.335  -0.188  C35  UYM  12  
UYM  C37  C11  C  0  1  Y  N  N  -18.740  35.355  -17.212  -4.926  -0.525  -0.737  C37  UYM  13  
UYM  C38  C12  C  0  1  Y  N  N  -20.063  35.780  -17.260  -3.579  -0.128  -0.648  C38  UYM  14  
UYM  C39  C13  C  0  1  Y  N  N  -20.359  37.123  -16.935  -3.226   1.201  -0.887  C39  UYM  15  
UYM  C4   C14  C  0  1  Y  N  N  -19.227  38.947  -20.706   3.738   2.322  -0.241  C4   UYM  16  
UYM  C40  C15  C  0  1  Y  N  N  -19.320  38.006  -16.575  -4.193   2.112  -1.207  C40  UYM  17  
UYM  C41  C16  C  0  1  Y  N  N  -18.001  37.564  -16.531  -5.524   1.726  -1.296  C41  UYM  18  
UYM  C42  C17  C  0  1  Y  N  N  -17.699  36.238  -16.844  -5.894   0.420  -1.063  C42  UYM  19  
UYM  C5   C18  C  0  1  Y  N  N  -18.132  39.782  -22.599   4.926   0.483  -0.750  C5   UYM  20  
UYM  C6   C19  C  0  1  Y  N  N  -18.355  38.364  -22.722   3.573   0.108  -0.656  C6   UYM  21  
UYM  C7   C20  C  0  1  Y  N  N  -17.919  37.730  -23.886   3.202  -1.220  -0.871  C7   UYM  22  
UYM  C8   C21  C  0  1  Y  N  N  -17.278  38.437  -24.916   4.156  -2.151  -1.171  C8   UYM  23  
UYM  C9   C22  C  0  1  Y  N  N  -17.058  39.832  -24.791   5.492  -1.786  -1.266  C9   UYM  24  
UYM  N1   N2   N  0  1  N  N  N  -21.704  37.154  -20.491   1.363  -0.291   1.591  N1   UYM  25  
UYM  N2   N3   N  0  1  N  N  N  -22.215  34.372  -20.249  -1.354   0.354   1.583  N2   UYM  26  
UYM  N36  N4   N  0  1  Y  N  N  -18.809  33.907  -17.611  -4.973  -1.871  -0.451  N36  UYM  27  
UYM  O1   O2   O  0  1  N  N  N  -23.128  37.449  -18.747   0.839  -2.408   1.825  O1   UYM  28  
UYM  H1   H1   H  0  1  N  N  N  -18.744  40.913  -20.900   5.805   2.362  -0.493  H1   UYM  29  
UYM  H2   H2   H  0  1  N  N  N  -21.218  36.647  -22.451   1.587   1.740   2.008  H2   UYM  30  
UYM  H3   H3   H  0  1  N  N  N  -17.331  41.554  -23.514   6.922  -0.207  -1.133  H3   UYM  31  
UYM  H4   H4   H  0  1  N  N  N  -23.925  35.011  -19.253  -1.581  -1.663   2.042  H4   UYM  32  
UYM  H5   H5   H  0  1  N  N  N  -22.736  35.588  -17.106  -0.827  -0.753  -0.767  H5   UYM  33  
UYM  H6   H6   H  0  1  N  N  N  -22.733  33.842  -17.528  -1.008  -2.452  -0.268  H6   UYM  34  
UYM  H7   H7   H  0  1  N  N  N  -18.926  35.827  -21.896   0.831   0.766  -0.780  H7   UYM  35  
UYM  H8   H8   H  0  1  N  N  N  -19.206  36.297  -20.186   1.035   2.473  -0.319  H8   UYM  36  
UYM  H9   H9   H  0  1  N  N  N  -20.658  32.754  -18.108  -3.469  -3.355   0.068  H9   UYM  37  
UYM  H10  H10  H  0  1  N  N  N  -21.380  37.473  -16.962  -2.193   1.508  -0.819  H10  UYM  38  
UYM  H11  H11  H  0  1  N  N  N  -19.708  38.890  -19.741   3.507   3.352  -0.014  H11  UYM  39  
UYM  H12  H12  H  0  1  N  N  N  -19.550  39.033  -16.332  -3.920   3.141  -1.391  H12  UYM  40  
UYM  H13  H13  H  0  1  N  N  N  -17.211  38.247  -16.255  -6.277   2.458  -1.549  H13  UYM  41  
UYM  H14  H14  H  0  1  N  N  N  -16.678  35.889  -16.805  -6.931   0.129  -1.135  H14  UYM  42  
UYM  H15  H15  H  0  1  N  N  N  -18.079  36.668  -23.998   2.164  -1.512  -0.799  H15  UYM  43  
UYM  H16  H16  H  0  1  N  N  N  -16.952  37.917  -25.805   3.869  -3.179  -1.337  H16  UYM  44  
UYM  H17  H17  H  0  1  N  N  N  -16.565  40.382  -25.579   6.235  -2.533  -1.504  H17  UYM  45  
UYM  H18  H18  H  0  1  N  N  N  -21.594  38.145  -20.573   2.294  -0.511   1.755  H18  UYM  46  
UYM  H19  H19  H  0  1  N  N  N  -22.413  33.392  -20.233  -2.284   0.577   1.745  H19  UYM  47  
UYM  H20  H20  H  0  1  N  N  N  -18.057  33.254  -17.703  -5.780  -2.409  -0.437  H20  UYM  48  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UYM  C8   C9   DOUB  Y  N   1  
UYM  C8   C7   SING  Y  N   2  
UYM  C9   C10  SING  Y  N   3  
UYM  C7   C6   DOUB  Y  N   4  
UYM  C10  C5   DOUB  Y  N   5  
UYM  C6   C5   SING  Y  N   6  
UYM  C6   C3   SING  Y  N   7  
UYM  C5   N    SING  Y  N   8  
UYM  O    C    DOUB  N  N   9  
UYM  C3   C2   SING  N  N  10  
UYM  C3   C4   DOUB  Y  N  11  
UYM  C1   C    SING  N  N  12  
UYM  C1   C2   SING  N  N  13  
UYM  C1   N1   SING  N  N  14  
UYM  N    C4   SING  Y  N  15  
UYM  C    N2   SING  N  N  16  
UYM  N1   C15  SING  N  N  17  
UYM  N2   C11  SING  N  N  18  
UYM  C15  C11  SING  N  N  19  
UYM  C15  O1   DOUB  N  N  20  
UYM  C11  C12  SING  N  N  21  
UYM  C35  C34  DOUB  Y  N  22  
UYM  C35  N36  SING  Y  N  23  
UYM  C12  C34  SING  N  N  24  
UYM  C34  C38  SING  Y  N  25  
UYM  N36  C37  SING  Y  N  26  
UYM  C38  C37  DOUB  Y  N  27  
UYM  C38  C39  SING  Y  N  28  
UYM  C37  C42  SING  Y  N  29  
UYM  C39  C40  DOUB  Y  N  30  
UYM  C42  C41  DOUB  Y  N  31  
UYM  C40  C41  SING  Y  N  32  
UYM  N    H1   SING  N  N  33  
UYM  C1   H2   SING  N  N  34  
UYM  C10  H3   SING  N  N  35  
UYM  C11  H4   SING  N  N  36  
UYM  C12  H5   SING  N  N  37  
UYM  C12  H6   SING  N  N  38  
UYM  C2   H7   SING  N  N  39  
UYM  C2   H8   SING  N  N  40  
UYM  C35  H9   SING  N  N  41  
UYM  C39  H10  SING  N  N  42  
UYM  C4   H11  SING  N  N  43  
UYM  C40  H12  SING  N  N  44  
UYM  C41  H13  SING  N  N  45  
UYM  C42  H14  SING  N  N  46  
UYM  C7   H15  SING  N  N  47  
UYM  C8   H16  SING  N  N  48  
UYM  C9   H17  SING  N  N  49  
UYM  N1   H18  SING  N  N  50  
UYM  N2   H19  SING  N  N  51  
UYM  N36  H20  SING  N  N  52  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UYM  SMILES            ACDLabs               12.01  "n4cc(CC3C(NC(Cc2c1c(cccc1)nc2)C(=O)N3)=O)c5c4cccc5"  
UYM  InChI             InChI                 1.03   "InChI=1S/C22H20N4O2/c27-21-19(9-13-11-23-17-7-3-1-5-15(13)17)25-22(28)20(26-21)10-14-12-24-18-8-4-2-6-16(14)18/h1-8,11-12,19-20,23-24H,9-10H2,(H,25,28)(H,26,27)/t19-,20-/m0/s1"  
UYM  InChIKey          InChI                 1.03   DNHODRZUCGXYKU-PMACEKPBSA-N  
UYM  SMILES_CANONICAL  CACTVS                3.385  "O=C1N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N[C@H]1Cc4c[nH]c5ccccc45"  
UYM  SMILES            CACTVS                3.385  "O=C1N[CH](Cc2c[nH]c3ccccc23)C(=O)N[CH]1Cc4c[nH]c5ccccc45"  
UYM  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)c(c[nH]2)C[C@H]3C(=O)N[C@H](C(=O)N3)Cc4c[nH]c5c4cccc5"  
UYM  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)c(c[nH]2)CC3C(=O)NC(C(=O)N3)Cc4c[nH]c5c4cccc5"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
UYM  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3S,6S)-3,6-bis[(1H-indol-3-yl)methyl]piperazine-2,5-dione"  
UYM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(3~{S},6~{S})-3,6-bis(1~{H}-indol-3-ylmethyl)piperazine-2,5-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UYM  "Create component"  2020-06-05  RCSB  
UYM  "Initial release"   2021-06-09  RCSB  
##
