data_SKM
#

_chem_comp.id                                   SKM
_chem_comp.name                                 "(3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C7 H10 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        SHIKIMATE
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-08-16
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       174.151
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SKM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1U8A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SKM  O12  O12  O  0  1  N  N  N  36.950  -35.355  28.767   3.115  -0.170   0.414  O12  SKM   1  
SKM  C8   C8   C  0  1  N  N  S  36.229  -36.020  29.806   1.704  -0.047   0.598  C8   SKM   2  
SKM  C6   C6   C  0  1  N  N  R  37.213  -36.403  30.930   1.141   1.014  -0.355  C6   SKM   3  
SKM  O7   O7   O  0  1  N  N  N  36.505  -37.012  32.013   1.879   2.229  -0.210  O7   SKM   4  
SKM  C5   C5   C  0  1  N  N  N  37.952  -35.140  31.413  -0.328   1.260  -0.003  C5   SKM   5  
SKM  C4   C4   C  0  1  N  N  N  37.002  -33.949  31.648  -1.060  -0.047   0.099  C4   SKM   6  
SKM  C1   C1   C  0  1  N  N  N  37.533  -32.702  32.377  -2.528  -0.023   0.046  C1   SKM   7  
SKM  O2   O2   O  0  1  N  N  N  38.804  -32.552  32.558  -3.179   1.149  -0.090  O2   SKM   8  
SKM  O3   O3   O  0  1  N  N  N  36.721  -31.785  32.781  -3.156  -1.061   0.126  O3   SKM   9  
SKM  C10  C10  C  0  1  N  N  N  35.742  -33.933  31.177  -0.463  -1.212   0.233  C10  SKM  10  
SKM  C9   C9   C  0  1  N  N  R  35.134  -35.091  30.362   1.027  -1.384   0.291  C9   SKM  11  
SKM  O11  O11  O  0  1  N  N  N  34.349  -34.565  29.288   1.498  -1.868  -0.969  O11  SKM  12  
SKM  H12  H12  H  0  1  N  N  N  36.344  -35.119  28.075   3.418  -0.855   1.027  H12  SKM  13  
SKM  H8   H8   H  0  1  N  N  N  35.746  -36.939  29.400   1.492   0.243   1.627  H8   SKM  14  
SKM  H6   H6   H  0  1  N  N  N  37.958  -37.135  30.540   1.216   0.660  -1.384  H6   SKM  15  
SKM  HO7  HO7  H  0  1  N  N  N  37.111  -37.248  32.705   1.488   2.868  -0.822  HO7  SKM  16  
SKM  H51  1H5  H  0  1  N  N  N  38.774  -34.864  30.711  -0.388   1.783   0.951  H51  SKM  17  
SKM  H52  2H5  H  0  1  N  N  N  38.558  -35.355  32.324  -0.788   1.872  -0.778  H52  SKM  18  
SKM  HO2  HO2  H  0  1  N  N  N  39.132  -31.782  33.008  -4.146   1.164  -0.124  HO2  SKM  19  
SKM  H10  H10  H  0  1  N  N  N  35.223  -32.999  31.451  -1.080  -2.095   0.305  H10  SKM  20  
SKM  H9   H9   H  0  1  N  N  N  34.485  -35.692  31.041   1.278  -2.104   1.071  H9   SKM  21  
SKM  H11  H11  H  0  1  N  N  N  33.674  -33.992  29.631   1.060  -2.716  -1.124  H11  SKM  22  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SKM  O12  C8   SING  N  N   1  
SKM  O12  H12  SING  N  N   2  
SKM  C8   C6   SING  N  N   3  
SKM  C8   C9   SING  N  N   4  
SKM  C8   H8   SING  N  N   5  
SKM  C6   O7   SING  N  N   6  
SKM  C6   C5   SING  N  N   7  
SKM  C6   H6   SING  N  N   8  
SKM  O7   HO7  SING  N  N   9  
SKM  C5   C4   SING  N  N  10  
SKM  C5   H51  SING  N  N  11  
SKM  C5   H52  SING  N  N  12  
SKM  C4   C1   SING  N  N  13  
SKM  C4   C10  DOUB  N  N  14  
SKM  C1   O2   SING  N  N  15  
SKM  C1   O3   DOUB  N  N  16  
SKM  O2   HO2  SING  N  N  17  
SKM  C10  C9   SING  N  N  18  
SKM  C10  H10  SING  N  N  19  
SKM  C9   O11  SING  N  N  20  
SKM  C9   H9   SING  N  N  21  
SKM  O11  H11  SING  N  N  22  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SKM  SMILES            ACDLabs               10.04  "O=C(O)C1=CC(O)C(O)C(O)C1"  
SKM  SMILES_CANONICAL  CACTVS                3.341  "O[C@@H]1CC(=C[C@@H](O)[C@H]1O)C(O)=O"  
SKM  SMILES            CACTVS                3.341  "O[CH]1CC(=C[CH](O)[CH]1O)C(O)=O"  
SKM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1[C@H]([C@@H]([C@@H](C=C1C(=O)O)O)O)O"  
SKM  SMILES            "OpenEye OEToolkits"  1.5.0  "C1C(C(C(C=C1C(=O)O)O)O)O"  
SKM  InChI             InChI                 1.03   "InChI=1S/C7H10O5/c8-4-1-3(7(11)12)2-5(9)6(4)10/h1,4-6,8-10H,2H2,(H,11,12)/t4-,5-,6-/m1/s1"  
SKM  InChIKey          InChI                 1.03   JXOHGGNKMLTUBP-HSUXUTPPSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SKM  "SYSTEMATIC NAME"  ACDLabs               10.04  "(3R,4S,5R)-3,4,5-trihydroxycyclohex-1-ene-1-carboxylic acid"  
SKM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(3R,4S,5R)-3,4,5-trihydroxycyclohexene-1-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SKM  "Create component"   2004-08-16  RCSB  
SKM  "Modify descriptor"  2011-06-04  RCSB  
SKM  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SKM
_pdbx_chem_comp_synonyms.name        SHIKIMATE
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
