data_RUM
# 
_chem_comp.id                                    RUM 
_chem_comp.name                                  "2-({2-[(3R)-3-aminopiperidin-1-yl]-5-bromo-6-oxopyrimidin-1(6H)-yl}methyl)benzonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H18 Br N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-02-03 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        388.262 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RUM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3G0G 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RUM N17  N17  N  0 1 N N N -45.335 -1.829 -32.759 -1.940 -1.610 1.887  N17  RUM 1  
RUM C16  C16  C  0 1 N N N -45.847 -2.453 -31.923 -1.085 -2.141 1.361  C16  RUM 2  
RUM C15  C15  C  0 1 Y N N -46.480 -3.136 -31.044 -0.006 -2.809 0.698  C15  RUM 3  
RUM C14  C14  C  0 1 Y N N -47.824 -3.406 -31.250 0.656  -3.866 1.326  C14  RUM 4  
RUM C13  C13  C  0 1 Y N N -48.525 -4.175 -30.307 1.695  -4.506 0.682  C13  RUM 5  
RUM C12  C12  C  0 1 Y N N -47.921 -4.669 -29.148 2.081  -4.103 -0.584 C12  RUM 6  
RUM C11  C11  C  0 1 Y N N -46.579 -4.402 -28.903 1.429  -3.056 -1.213 C11  RUM 7  
RUM C10  C10  C  0 1 Y N N -45.820 -3.658 -29.808 0.385  -2.412 -0.582 C10  RUM 8  
RUM C9   C9   C  0 1 N N N -44.354 -3.404 -29.503 -0.328 -1.276 -1.271 C9   RUM 9  
RUM N2   N2   N  0 1 N N N -44.014 -1.978 -29.609 0.060  -0.008 -0.650 N2   RUM 10 
RUM C3   C3   C  0 1 N N N -42.946 -1.486 -30.415 -0.892 0.838  -0.172 C3   RUM 11 
RUM N4   N4   N  0 1 N N N -42.677 -0.146 -30.445 -0.567 1.984  0.390  N4   RUM 12 
RUM C5   C5   C  0 1 N N N -43.384 0.778  -29.772 0.705  2.359  0.513  C5   RUM 13 
RUM C6   C6   C  0 1 N N N -44.440 0.382  -28.970 1.704  1.552  0.052  C6   RUM 14 
RUM BR7  BR7  BR 0 0 N N N -45.868 1.636  -28.970 3.515  2.072  0.220  BR7  RUM 15 
RUM C1   C1   C  0 1 N N N -44.772 -1.039 -28.881 1.365  0.324  -0.545 C1   RUM 16 
RUM O8   O8   O  0 1 N N N -45.723 -1.358 -28.158 2.233  -0.425 -0.963 O8   RUM 17 
RUM N18  N18  N  0 1 N N N -42.072 -2.314 -31.142 -2.213 0.492  -0.278 N18  RUM 18 
RUM C23  C23  C  0 1 N N N -41.846 -2.091 -32.587 -3.132 0.693  0.851  C23  RUM 19 
RUM C22  C22  C  0 1 N N R -41.346 -3.365 -33.284 -4.336 1.508  0.368  C22  RUM 20 
RUM N24  N24  N  0 1 N N N -42.464 -4.274 -33.548 -5.326 1.608  1.448  N24  RUM 21 
RUM C21  C21  C  0 1 N N N -40.275 -4.056 -32.434 -4.966 0.812  -0.840 C21  RUM 22 
RUM C20  C20  C  0 1 N N N -40.903 -4.495 -31.115 -3.946 0.736  -1.978 C20  RUM 23 
RUM C19  C19  C  0 1 N N N -41.331 -3.272 -30.308 -2.739 -0.082 -1.524 C19  RUM 24 
RUM H14  H14  H  0 1 N N N -48.327 -3.028 -32.128 0.356  -4.181 2.315  H14  RUM 25 
RUM H13  H13  H  0 1 N N N -49.568 -4.392 -30.484 2.208  -5.323 1.167  H13  RUM 26 
RUM H12  H12  H  0 1 N N N -48.494 -5.256 -28.446 2.895  -4.607 -1.084 H12  RUM 27 
RUM H11  H11  H  0 1 N N N -46.118 -4.775 -28.001 1.736  -2.746 -2.201 H11  RUM 28 
RUM H9   H9   H  0 1 N N N -44.143 -3.742 -28.478 -0.055 -1.263 -2.326 H9   RUM 29 
RUM H9A  H9A  H  0 1 N N N -43.750 -3.957 -30.238 -1.405 -1.413 -1.176 H9A  RUM 30 
RUM H5   H5   H  0 1 N N N -43.129 1.824  -29.857 0.946  3.304  0.977  H5   RUM 31 
RUM H23  H23  H  0 1 N N N -42.795 -1.783 -33.050 -3.471 -0.274 1.222  H23  RUM 32 
RUM H23A H23A H  0 0 N N N -41.078 -1.311 -32.700 -2.620 1.231  1.648  H23A RUM 33 
RUM H22  H22  H  0 1 N N N -40.893 -3.084 -34.246 -4.007 2.507  0.081  H22  RUM 34 
RUM HN24 HN24 H  0 0 N N N -42.935 -4.481 -32.691 -6.130 2.142  1.153  HN24 RUM 35 
RUM HN2A HN2A H  0 0 N N N -43.103 -3.840 -34.183 -5.599 0.693  1.774  HN2A RUM 36 
RUM H21  H21  H  0 1 N N N -39.886 -4.934 -32.970 -5.273 -0.196 -0.560 H21  RUM 37 
RUM H21A H21A H  0 0 N N N -39.446 -3.360 -32.240 -5.838 1.377  -1.171 H21A RUM 38 
RUM H20  H20  H  0 1 N N N -41.784 -5.120 -31.322 -4.403 0.262  -2.846 H20  RUM 39 
RUM H20A H20A H  0 0 N N N -40.164 -5.069 -30.537 -3.621 1.743  -2.243 H20A RUM 40 
RUM H19  H19  H  0 1 N N N -40.433 -2.777 -29.910 -1.969 -0.053 -2.294 H19  RUM 41 
RUM H19A H19A H  0 0 N N N -41.990 -3.606 -29.493 -3.046 -1.114 -1.350 H19A RUM 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RUM N17 C16  TRIP N N 1  
RUM C16 C15  SING N N 2  
RUM C15 C10  SING Y N 3  
RUM C14 C15  DOUB Y N 4  
RUM C14 C13  SING Y N 5  
RUM C14 H14  SING N N 6  
RUM C13 C12  DOUB Y N 7  
RUM C13 H13  SING N N 8  
RUM C12 C11  SING Y N 9  
RUM C12 H12  SING N N 10 
RUM C11 H11  SING N N 11 
RUM C10 C11  DOUB Y N 12 
RUM C10 C9   SING N N 13 
RUM C9  H9   SING N N 14 
RUM C9  H9A  SING N N 15 
RUM N2  C9   SING N N 16 
RUM N2  C1   SING N N 17 
RUM C3  N2   SING N N 18 
RUM N4  C3   DOUB N N 19 
RUM N4  C5   SING N N 20 
RUM C5  C6   DOUB N N 21 
RUM C5  H5   SING N N 22 
RUM C6  C1   SING N N 23 
RUM C6  BR7  SING N N 24 
RUM C1  O8   DOUB N N 25 
RUM N18 C3   SING N N 26 
RUM N18 C19  SING N N 27 
RUM C23 N18  SING N N 28 
RUM C23 H23  SING N N 29 
RUM C23 H23A SING N N 30 
RUM C22 C23  SING N N 31 
RUM C22 C21  SING N N 32 
RUM C22 H22  SING N N 33 
RUM N24 C22  SING N N 34 
RUM N24 HN24 SING N N 35 
RUM N24 HN2A SING N N 36 
RUM C21 C20  SING N N 37 
RUM C21 H21  SING N N 38 
RUM C21 H21A SING N N 39 
RUM C20 C19  SING N N 40 
RUM C20 H20  SING N N 41 
RUM C20 H20A SING N N 42 
RUM C19 H19  SING N N 43 
RUM C19 H19A SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RUM SMILES           ACDLabs              10.04 "N#Cc1ccccc1CN3C(=O)C(Br)=CN=C3N2CC(N)CCC2"                                                                                                
RUM SMILES_CANONICAL CACTVS               3.341 "N[C@@H]1CCCN(C1)C2=NC=C(Br)C(=O)N2Cc3ccccc3C#N"                                                                                           
RUM SMILES           CACTVS               3.341 "N[CH]1CCCN(C1)C2=NC=C(Br)C(=O)N2Cc3ccccc3C#N"                                                                                             
RUM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(c(c1)CN2C(=O)C(=CN=C2N3CCC[C@H](C3)N)Br)C#N"                                                                                        
RUM SMILES           "OpenEye OEToolkits" 1.5.0 "c1ccc(c(c1)CN2C(=O)C(=CN=C2N3CCCC(C3)N)Br)C#N"                                                                                            
RUM InChI            InChI                1.03  "InChI=1S/C17H18BrN5O/c18-15-9-21-17(22-7-3-6-14(20)11-22)23(16(15)24)10-13-5-2-1-4-12(13)8-19/h1-2,4-5,9,14H,3,6-7,10-11,20H2/t14-/m1/s1" 
RUM InChIKey         InChI                1.03  GGCILSXUAHLDMF-CQSZACIVSA-N                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RUM "SYSTEMATIC NAME" ACDLabs              10.04 "2-({2-[(3R)-3-aminopiperidin-1-yl]-5-bromo-6-oxopyrimidin-1(6H)-yl}methyl)benzonitrile" 
RUM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[2-[(3R)-3-aminopiperidin-1-yl]-5-bromo-6-oxo-pyrimidin-1-yl]methyl]benzonitrile"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RUM "Create component"  2009-02-03 RCSB 
RUM "Modify descriptor" 2011-06-04 RCSB 
# 
