data_G6M
#

_chem_comp.id                                   G6M
_chem_comp.name                                 "2-chloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H19 Cl F N3 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "oxazolidinone antibiotic LZD-6"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-05-10
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       371.791
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G6M
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6DDG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G6M  C6    C1   C   0  1  Y  N  N  209.870  187.077  171.538   3.047   0.915  -0.695  C6    G6M   1  
G6M  C5    C2   C   0  1  Y  N  N  210.210  186.817  170.226   1.699   0.727  -0.930  C5    G6M   2  
G6M  C4    C3   C   0  1  Y  N  N  210.590  187.853  169.393   1.048  -0.378  -0.397  C4    G6M   3  
G6M  C3    C4   C   0  1  Y  N  N  210.619  189.147  169.876   1.752  -1.294   0.372  C3    G6M   4  
G6M  C2    C5   C   0  1  Y  N  N  210.283  189.406  171.190   3.101  -1.107   0.608  C2    G6M   5  
G6M  C1    C6   C   0  1  Y  N  N  209.907  188.374  172.017   3.752  -0.001   0.074  C1    G6M   6  
G6M  C10   C7   C   0  1  N  N  S  210.632  187.411  165.831  -2.566  -0.351  -1.363  C10   G6M   7  
G6M  C12   C8   C   0  1  N  N  N  211.745  186.641  167.695  -1.057  -1.589  -0.178  C12   G6M   8  
G6M  C15   C9   C   0  1  N  N  N  210.535  188.276  174.369   5.884   0.122  -0.947  C15   G6M   9  
G6M  C16   C10  C   0  1  N  N  N  210.515  189.293  175.503   7.376   0.272  -0.640  C16   G6M  10  
G6M  C18   C11  C   0  1  N  N  N  208.625  190.349  174.605   6.864   1.597   1.289  C18   G6M  11  
G6M  C19   C12  C   0  1  N  N  N  208.294  189.219  173.658   5.367   1.460   1.001  C19   G6M  12  
G6M  C20   C13  C   0  1  N  N  N  209.337  186.746  165.366  -3.582   0.577  -0.693  C20   G6M  13  
G6M  C30   C14  C   0  1  N  N  N  207.178  185.965  166.132  -5.914   0.506   0.010  C30   G6M  14  
G6M  C31   C15  C   0  1  N  N  N  206.260  185.575  167.270  -7.232  -0.211   0.150  C31   G6M  15  
G6M  C9    C16  C   0  1  N  N  N  210.426  188.394  166.982  -1.181   0.323  -1.429  C9    G6M  16  
G6M  F7    F1   F   0  1  N  N  N  210.316  190.660  171.661   3.787  -1.999   1.356  F7    G6M  17  
G6M  N14   N1   N   0  1  N  N  N  209.573  188.635  173.341   5.121   0.187   0.308  N14   G6M  18  
G6M  N29   N2   N   0  1  N  N  N  208.425  186.323  166.414  -4.863  -0.120  -0.557  N29   G6M  19  
G6M  N8    N3   N   0  1  N  N  N  210.939  187.605  168.068  -0.320  -0.567  -0.636  N8    G6M  20  
G6M  O11   O1   O   0  1  N  N  N  211.595  186.430  166.271  -2.342  -1.537  -0.548  O11   G6M  21  
G6M  O13   O2   O   0  1  N  N  N  212.517  186.009  168.390  -0.600  -2.480   0.510  O13   G6M  22  
G6M  O17   O3   O   0  1  N  N  N  209.209  189.784  175.768   7.591   1.500   0.062  O17   G6M  23  
G6M  O32   O4   O   0  1  N  N  N  206.758  185.941  164.988  -5.798   1.646   0.406  O32   G6M  24  
G6M  CL33  CL1  CL  0  0  N  N  N  206.293  186.734  168.632  -8.429   0.882   0.939  CL33  G6M  25  
G6M  H6    H1   H   0  1  N  N  N  209.575  186.268  172.190   3.554   1.772  -1.113  H6    G6M  26  
G6M  H5    H2   H   0  1  N  N  N  210.179  185.805  169.850   1.151   1.440  -1.528  H5    G6M  27  
G6M  H3    H3   H   0  1  N  N  N  210.905  189.959  169.224   1.245  -2.153   0.787  H3    G6M  28  
G6M  H10   H4   H   0  1  N  N  N  211.051  187.968  164.980  -2.902  -0.631  -2.361  H10   G6M  29  
G6M  H15   H5   H   0  1  N  N  N  210.282  187.283  174.770   5.565   0.928  -1.609  H15   G6M  30  
G6M  H151  H6   H   0  0  N  N  N  211.542  188.247  173.927   5.707  -0.838  -1.432  H151  G6M  31  
G6M  H16   H7   H   0  1  N  N  N  210.904  188.814  176.414   7.706  -0.563  -0.022  H16   G6M  32  
G6M  H161  H8   H   0  0  N  N  N  211.162  190.140  175.229   7.940   0.282  -1.572  H161  G6M  33  
G6M  H18   H9   H   0  1  N  N  N  209.335  191.041  174.128   7.059   2.564   1.752  H18   G6M  34  
G6M  H181  H10  H   0  0  N  N  N  207.707  190.893  174.874   7.180   0.801   1.963  H181  G6M  35  
G6M  H191  H11  H   0  0  N  N  N  207.805  189.602  172.750   4.812   1.476   1.939  H191  G6M  36  
G6M  H19   H12  H   0  1  N  N  N  207.639  188.482  174.145   5.040   2.287   0.371  H19   G6M  37  
G6M  H20   H13  H   0  1  N  N  N  208.803  187.462  164.724  -3.217   0.863   0.293  H20   G6M  38  
G6M  H201  H14  H   0  0  N  N  N  209.608  185.857  164.777  -3.717   1.469  -1.304  H201  G6M  39  
G6M  H311  H15  H   0  0  N  N  N  205.231  185.517  166.885  -7.596  -0.497  -0.837  H311  G6M  40  
G6M  H31   H16  H   0  1  N  N  N  206.567  184.587  167.644  -7.097  -1.104   0.761  H31   G6M  41  
G6M  H91   H17  H   0  1  N  N  N  211.004  189.319  166.839  -0.831   0.376  -2.460  H91   G6M  42  
G6M  H9    H18  H   0  1  N  N  N  209.364  188.643  167.123  -1.217   1.317  -0.984  H9    G6M  43  
G6M  HN29  H19  H   0  0  N  N  N  208.741  186.301  167.362  -4.955  -1.032  -0.874  HN29  G6M  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G6M  O32  C30   DOUB  N  N   1  
G6M  C20  C10   SING  N  N   2  
G6M  C20  N29   SING  N  N   3  
G6M  C10  O11   SING  N  N   4  
G6M  C10  C9    SING  N  N   5  
G6M  C30  N29   SING  N  N   6  
G6M  C30  C31   SING  N  N   7  
G6M  O11  C12   SING  N  N   8  
G6M  C9   N8    SING  N  N   9  
G6M  C31  CL33  SING  N  N  10  
G6M  C12  N8    SING  N  N  11  
G6M  C12  O13   DOUB  N  N  12  
G6M  N8   C4    SING  N  N  13  
G6M  C4   C3    DOUB  Y  N  14  
G6M  C4   C5    SING  Y  N  15  
G6M  C3   C2    SING  Y  N  16  
G6M  C5   C6    DOUB  Y  N  17  
G6M  C2   F7    SING  N  N  18  
G6M  C2   C1    DOUB  Y  N  19  
G6M  C6   C1    SING  Y  N  20  
G6M  C1   N14   SING  N  N  21  
G6M  N14  C19   SING  N  N  22  
G6M  N14  C15   SING  N  N  23  
G6M  C19  C18   SING  N  N  24  
G6M  C15  C16   SING  N  N  25  
G6M  C18  O17   SING  N  N  26  
G6M  C16  O17   SING  N  N  27  
G6M  C6   H6    SING  N  N  28  
G6M  C5   H5    SING  N  N  29  
G6M  C3   H3    SING  N  N  30  
G6M  C10  H10   SING  N  N  31  
G6M  C15  H15   SING  N  N  32  
G6M  C15  H151  SING  N  N  33  
G6M  C16  H16   SING  N  N  34  
G6M  C16  H161  SING  N  N  35  
G6M  C18  H18   SING  N  N  36  
G6M  C18  H181  SING  N  N  37  
G6M  C19  H191  SING  N  N  38  
G6M  C19  H19   SING  N  N  39  
G6M  C20  H20   SING  N  N  40  
G6M  C20  H201  SING  N  N  41  
G6M  C31  H311  SING  N  N  42  
G6M  C31  H31   SING  N  N  43  
G6M  C9   H91   SING  N  N  44  
G6M  C9   H9    SING  N  N  45  
G6M  N29  HN29  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G6M  SMILES            ACDLabs               12.01  "c1c(c(cc(c1)N2C(=O)OC(C2)CNC(CCl)=O)F)N3CCOCC3"  
G6M  InChI             InChI                 1.03   "InChI=1S/C16H19ClFN3O4/c17-8-15(22)19-9-12-10-21(16(23)25-12)11-1-2-14(13(18)7-11)20-3-5-24-6-4-20/h1-2,7,12H,3-6,8-10H2,(H,19,22)/t12-/m0/s1"  
G6M  InChIKey          InChI                 1.03   BLEAWUVPPDXJFJ-LBPRGKRZSA-N  
G6M  SMILES_CANONICAL  CACTVS                3.385  "Fc1cc(ccc1N2CCOCC2)N3C[C@H](CNC(=O)CCl)OC3=O"  
G6M  SMILES            CACTVS                3.385  "Fc1cc(ccc1N2CCOCC2)N3C[CH](CNC(=O)CCl)OC3=O"  
G6M  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1cc(c(cc1N2C[C@@H](OC2=O)CNC(=O)CCl)F)N3CCOCC3"  
G6M  SMILES            "OpenEye OEToolkits"  2.0.6  "c1cc(c(cc1N2CC(OC2=O)CNC(=O)CCl)F)N3CCOCC3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G6M  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-chloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide"  
G6M  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "2-chloranyl-~{N}-[[(5~{S})-3-(3-fluoranyl-4-morpholin-4-yl-phenyl)-2-oxidanylidene-1,3-oxazolidin-5-yl]methyl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G6M  "Create component"  2018-05-10  RCSB  
G6M  "Initial release"   2019-03-20  RCSB  
G6M  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     G6M
_pdbx_chem_comp_synonyms.name        "oxazolidinone antibiotic LZD-6"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
