data_E8M
# 
_chem_comp.id                                    E8M 
_chem_comp.name                                  "(3S)-6-cyclohexyl-3-{3-[(dimethylamino)methyl]-1,2,4-oxadiazol-5-yl}-N-hydroxyhexanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H30 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-12-13 
_chem_comp.pdbx_modified_date                    2018-08-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        338.445 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     E8M 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BTN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
E8M C10 C1  C 0 1 N N N 25.173 3.803  18.880 -4.603 2.105  -0.571 C10 E8M 1  
E8M C13 C2  C 0 1 Y N N 24.875 5.160  18.320 -3.346 1.513  0.013  C13 E8M 2  
E8M C20 C3  C 0 1 N N N 23.661 9.457  17.716 0.994  0.750  0.513  C20 E8M 3  
E8M C26 C4  C 0 1 N N N 25.238 11.141 18.759 3.476  0.978  0.688  C26 E8M 4  
E8M C01 C5  C 0 1 N N N 25.562 4.649  21.127 -6.049 0.602  0.659  C01 E8M 5  
E8M N05 N1  N 0 1 N N N 24.770 3.721  20.290 -5.633 1.063  -0.673 N05 E8M 6  
E8M C06 C6  C 0 1 N N N 24.871 2.338  20.793 -6.786 1.536  -1.450 C06 E8M 7  
E8M N14 N2  N 0 1 Y N N 25.641 5.758  17.461 -3.042 1.444  1.274  N14 E8M 8  
E8M O15 O1  O 0 1 Y N N 24.970 6.981  17.221 -1.964 0.908  1.418  O15 E8M 9  
E8M C16 C7  C 0 1 Y N N 23.866 6.958  17.986 -1.462 0.573  0.225  C16 E8M 10 
E8M N17 N3  N 0 1 Y N N 23.767 5.876  18.688 -2.335 0.955  -0.676 N17 E8M 11 
E8M C18 C8  C 0 1 N N S 22.953 8.126  18.001 -0.145 -0.112 -0.034 C18 E8M 12 
E8M C23 C9  C 0 1 N N N 25.017 9.692  18.366 2.337  0.117  0.141  C23 E8M 13 
E8M C29 C10 C 0 1 N N N 26.693 11.590 18.825 4.819  0.345  0.316  C29 E8M 14 
E8M C31 C11 C 0 1 N N N 26.879 12.779 19.755 5.954  1.137  0.968  C31 E8M 15 
E8M C34 C12 C 0 1 N N N 28.334 13.218 19.845 7.296  0.503  0.595  C34 E8M 16 
E8M C37 C13 C 0 1 N N N 28.895 13.546 18.473 7.466  0.526  -0.925 C37 E8M 17 
E8M C40 C14 C 0 1 N N N 28.699 12.375 17.512 6.331  -0.266 -1.577 C40 E8M 18 
E8M C43 C15 C 0 1 N N N 27.242 11.944 17.449 4.989  0.367  -1.204 C43 E8M 19 
E8M C46 C16 C 0 1 N N N 21.743 7.933  17.072 -0.134 -1.475 0.661  C46 E8M 20 
E8M C49 C17 C 0 1 N N N 20.967 9.186  16.716 -1.176 -2.366 0.037  C49 E8M 21 
E8M O50 O2  O 0 1 N N N 21.215 9.862  15.712 -1.861 -1.952 -0.874 O50 E8M 22 
E8M N51 N4  N 0 1 N N N 20.048 9.505  17.599 -1.348 -3.623 0.492  N51 E8M 23 
E8M O53 O3  O 0 1 N N N 19.293 10.652 17.391 -2.328 -4.460 -0.094 O53 E8M 24 
E8M H1  H1  H 0 1 N N N 24.622 3.046  18.303 -4.960 2.908  0.074  H1  E8M 25 
E8M H2  H2  H 0 1 N N N 26.253 3.610  18.802 -4.390 2.503  -1.563 H2  E8M 26 
E8M H3  H3  H 0 1 N N N 23.802 9.527  16.627 0.933  1.750  0.084  H3  E8M 27 
E8M H4  H4  H 0 1 N N N 22.992 10.263 18.052 0.912  0.815  1.598  H4  E8M 28 
E8M H5  H5  H 0 1 N N N 24.721 11.774 18.023 3.415  1.978  0.259  H5  E8M 29 
E8M H6  H6  H 0 1 N N N 24.791 11.294 19.752 3.394  1.043  1.773  H6  E8M 30 
E8M H7  H7  H 0 1 N N N 25.238 4.565  22.175 -6.456 1.442  1.223  H7  E8M 31 
E8M H8  H8  H 0 1 N N N 26.629 4.391  21.051 -6.812 -0.169 0.555  H8  E8M 32 
E8M H9  H9  H 0 1 N N N 25.408 5.680  20.777 -5.188 0.192  1.187  H9  E8M 33 
E8M H11 H11 H 0 1 N N N 24.564 2.308  21.849 -6.461 1.805  -2.455 H11 E8M 34 
E8M H12 H12 H 0 1 N N N 24.214 1.684  20.201 -7.534 0.745  -1.510 H12 E8M 35 
E8M H13 H13 H 0 1 N N N 25.911 1.991  20.704 -7.220 2.409  -0.962 H13 E8M 36 
E8M H14 H14 H 0 1 N N N 22.549 8.203  19.021 -0.013 -0.250 -1.107 H14 E8M 37 
E8M H15 H15 H 0 1 N N N 25.086 9.068  19.269 2.398  -0.883 0.571  H15 E8M 38 
E8M H16 H16 H 0 1 N N N 25.803 9.397  17.655 2.419  0.052  -0.944 H16 E8M 39 
E8M H17 H17 H 0 1 N N N 27.287 10.754 19.221 4.845  -0.686 0.669  H17 E8M 40 
E8M H18 H18 H 0 1 N N N 26.278 13.620 19.379 5.928  2.167  0.614  H18 E8M 41 
E8M H19 H19 H 0 1 N N N 26.531 12.500 20.760 5.833  1.121  2.051  H19 E8M 42 
E8M H20 H20 H 0 1 N N N 28.927 12.405 20.290 8.105  1.067  1.060  H20 E8M 43 
E8M H21 H21 H 0 1 N N N 28.400 14.112 20.483 7.322  -0.527 0.949  H21 E8M 44 
E8M H22 H22 H 0 1 N N N 29.970 13.761 18.565 7.440  1.556  -1.278 H22 E8M 45 
E8M H23 H23 H 0 1 N N N 28.377 14.431 18.074 8.423  0.075  -1.190 H23 E8M 46 
E8M H24 H24 H 0 1 N N N 29.309 11.526 17.854 6.452  -0.250 -2.660 H24 E8M 47 
E8M H25 H25 H 0 1 N N N 29.026 12.679 16.507 6.357  -1.296 -1.223 H25 E8M 48 
E8M H26 H26 H 0 1 N N N 26.646 12.768 17.030 4.180  -0.197 -1.669 H26 E8M 49 
E8M H27 H27 H 0 1 N N N 27.160 11.062 16.796 4.963  1.398  -1.558 H27 E8M 50 
E8M H28 H28 H 0 1 N N N 21.049 7.237  17.565 0.850  -1.932 0.549  H28 E8M 51 
E8M H29 H29 H 0 1 N N N 22.107 7.486  16.135 -0.354 -1.344 1.721  H29 E8M 52 
E8M H30 H30 H 0 1 N N N 19.895 8.933  18.405 -0.800 -3.954 1.221  H30 E8M 53 
E8M H31 H31 H 0 1 N N N 19.573 11.075 16.588 -2.377 -5.343 0.298  H31 E8M 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
E8M O50 C49 DOUB N N 1  
E8M C49 C46 SING N N 2  
E8M C49 N51 SING N N 3  
E8M C46 C18 SING N N 4  
E8M O15 N14 SING Y N 5  
E8M O15 C16 SING Y N 6  
E8M O53 N51 SING N N 7  
E8M C43 C40 SING N N 8  
E8M C43 C29 SING N N 9  
E8M N14 C13 DOUB Y N 10 
E8M C40 C37 SING N N 11 
E8M C20 C18 SING N N 12 
E8M C20 C23 SING N N 13 
E8M C16 C18 SING N N 14 
E8M C16 N17 DOUB Y N 15 
E8M C13 N17 SING Y N 16 
E8M C13 C10 SING N N 17 
E8M C23 C26 SING N N 18 
E8M C37 C34 SING N N 19 
E8M C26 C29 SING N N 20 
E8M C29 C31 SING N N 21 
E8M C10 N05 SING N N 22 
E8M C31 C34 SING N N 23 
E8M N05 C06 SING N N 24 
E8M N05 C01 SING N N 25 
E8M C10 H1  SING N N 26 
E8M C10 H2  SING N N 27 
E8M C20 H3  SING N N 28 
E8M C20 H4  SING N N 29 
E8M C26 H5  SING N N 30 
E8M C26 H6  SING N N 31 
E8M C01 H7  SING N N 32 
E8M C01 H8  SING N N 33 
E8M C01 H9  SING N N 34 
E8M C06 H11 SING N N 35 
E8M C06 H12 SING N N 36 
E8M C06 H13 SING N N 37 
E8M C18 H14 SING N N 38 
E8M C23 H15 SING N N 39 
E8M C23 H16 SING N N 40 
E8M C29 H17 SING N N 41 
E8M C31 H18 SING N N 42 
E8M C31 H19 SING N N 43 
E8M C34 H20 SING N N 44 
E8M C34 H21 SING N N 45 
E8M C37 H22 SING N N 46 
E8M C37 H23 SING N N 47 
E8M C40 H24 SING N N 48 
E8M C40 H25 SING N N 49 
E8M C43 H26 SING N N 50 
E8M C43 H27 SING N N 51 
E8M C46 H28 SING N N 52 
E8M C46 H29 SING N N 53 
E8M N51 H30 SING N N 54 
E8M O53 H31 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
E8M SMILES           ACDLabs              12.01 "C(N(C)C)c1nc(on1)C(CCCC2CCCCC2)CC(NO)=O"                                                                                                
E8M InChI            InChI                1.03  "InChI=1S/C17H30N4O3/c1-21(2)12-15-18-17(24-20-15)14(11-16(22)19-23)10-6-9-13-7-4-3-5-8-13/h13-14,23H,3-12H2,1-2H3,(H,19,22)/t14-/m0/s1" 
E8M InChIKey         InChI                1.03  ILYORWQDLYKJJF-AWEZNQCLSA-N                                                                                                              
E8M SMILES_CANONICAL CACTVS               3.385 "CN(C)Cc1noc(n1)[C@@H](CCCC2CCCCC2)CC(=O)NO"                                                                                             
E8M SMILES           CACTVS               3.385 "CN(C)Cc1noc(n1)[CH](CCCC2CCCCC2)CC(=O)NO"                                                                                               
E8M SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN(C)Cc1nc(on1)[C@@H](CCCC2CCCCC2)CC(=O)NO"                                                                                             
E8M SMILES           "OpenEye OEToolkits" 2.0.6 "CN(C)Cc1nc(on1)C(CCCC2CCCCC2)CC(=O)NO"                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
E8M "SYSTEMATIC NAME" ACDLabs              12.01 "(3S)-6-cyclohexyl-3-{3-[(dimethylamino)methyl]-1,2,4-oxadiazol-5-yl}-N-hydroxyhexanamide"         
E8M "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{S})-6-cyclohexyl-3-[3-[(dimethylamino)methyl]-1,2,4-oxadiazol-5-yl]-~{N}-oxidanyl-hexanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
E8M "Create component" 2017-12-13 RCSB 
E8M "Initial release"  2018-08-08 RCSB 
# 
