data_A1ADM
# 
_chem_comp.id                                    A1ADM 
_chem_comp.name                                  "N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-1-(1H-indole-2-carbonyl)-4,4-dimethyl-L-prolinamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H30 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        426.509 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ADM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8VQX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ADM N1  N1  N 0 1 Y N N N N N 9.591  -4.145 23.014 3.882  -0.067 0.189  N1  A1ADM 1  
A1ADM C5  C1  C 0 1 Y N N N N N 10.679 -3.062 24.620 3.413  2.030  -0.417 C5  A1ADM 2  
A1ADM C6  C2  C 0 1 Y N N N N N 11.538 -6.653 25.629 7.036  2.582  0.466  C6  A1ADM 3  
A1ADM C7  C3  C 0 1 Y N N N N N 10.861 -7.286 24.589 7.306  1.271  0.839  C7  A1ADM 4  
A1ADM C8  C4  C 0 1 Y N N N N N 11.567 -5.257 25.757 5.791  2.940  0.038  C8  A1ADM 5  
A1ADM C10 C5  C 0 1 Y N N N N N 10.870 -4.463 24.809 4.773  1.980  -0.028 C10 A1ADM 6  
A1ADM N12 N2  N 0 1 N N N N N N 9.470  -0.498 23.389 1.146  -0.903 -0.522 N12 A1ADM 7  
A1ADM C13 C6  C 0 1 N N S N N N 9.017  0.706  22.649 -0.222 -1.417 -0.684 C13 A1ADM 8  
A1ADM C17 C7  C 0 1 N N N N N N 9.564  -0.264 24.842 2.055  -2.042 -0.299 C17 A1ADM 9  
A1ADM C20 C8  C 0 1 N N N N N N 9.602  1.847  26.221 1.791  -4.566 -0.285 C20 A1ADM 10 
A1ADM C22 C9  C 0 1 N N S N N N 9.807  1.831  19.113 -3.306 -0.359 1.322  C22 A1ADM 11 
A1ADM C26 C10 C 0 1 N N N N N N 9.209  -1.144 16.751 -5.782 1.526  -0.933 C26 A1ADM 12 
A1ADM C28 C11 C 0 1 N N N N N N 11.494 -1.699 16.805 -4.832 3.558  -0.329 C28 A1ADM 13 
A1ADM C2  C12 C 0 1 Y N N N N N 9.876  -2.893 23.495 2.897  0.781  -0.278 C2  A1ADM 14 
A1ADM C3  C13 C 0 1 N N N N N N 9.384  -1.723 22.806 1.510  0.393  -0.576 C3  A1ADM 15 
A1ADM O4  O1  O 0 1 N N N N N N 9.020  -1.822 21.640 0.691  1.243  -0.871 O4  A1ADM 16 
A1ADM C9  C14 C 0 1 Y N N N N N 10.167 -6.520 23.637 6.322  0.309  0.783  C9  A1ADM 17 
A1ADM C11 C15 C 0 1 Y N N N N N 10.187 -5.126 23.790 5.044  0.650  0.350  C11 A1ADM 18 
A1ADM C14 C16 C 0 1 N N N N N N 9.858  0.923  21.418 -1.107 -0.870 0.407  C14 A1ADM 19 
A1ADM O15 O2  O 0 1 N N N N N N 11.054 0.639  21.365 -0.613 -0.412 1.416  O15 A1ADM 20 
A1ADM C16 C17 C 0 1 N N N N N N 9.225  1.833  23.676 -0.150 -2.955 -0.580 C16 A1ADM 21 
A1ADM C18 C18 C 0 1 N N N N N N 8.949  1.136  25.040 1.331  -3.257 -0.931 C18 A1ADM 22 
A1ADM C19 C19 C 0 1 N N N N N N 7.459  1.019  25.243 1.540  -3.293 -2.446 C19 A1ADM 23 
A1ADM N21 N3  N 0 1 N N N N N N 9.164  1.458  20.361 -2.447 -0.891 0.262  N21 A1ADM 24 
A1ADM C23 C20 C 0 1 N N N N N N 9.418  3.261  18.861 -3.510 -1.429 2.397  C23 A1ADM 25 
A1ADM O24 O3  O 0 1 N N N N N N 10.137 3.935  17.823 -4.231 -2.531 1.842  O24 A1ADM 26 
A1ADM C25 C21 C 0 1 N N N N N N 9.307  1.071  17.902 -4.662 0.034  0.731  C25 A1ADM 27 
A1ADM C27 C22 C 0 1 N N N N N N 11.294 -0.478 17.695 -4.087 2.484  0.495  C27 A1ADM 28 
A1ADM C29 C23 C 0 1 N N S N N N 9.776  -0.365 17.928 -4.472 1.188  -0.256 C29 A1ADM 29 
A1ADM N30 N4  N 0 1 N N N N N N 10.225 -1.816 16.113 -5.960 2.859  -0.955 N30 A1ADM 30 
A1ADM O31 O4  O 0 1 N N N N N N 8.026  -1.191 16.420 -6.556 0.714  -1.394 O31 A1ADM 31 
A1ADM H1  H1  H 0 1 N N N N N N 9.027  -4.326 22.209 3.772  -1.013 0.377  H1  A1ADM 32 
A1ADM H2  H2  H 0 1 N N N N N N 11.084 -2.274 25.238 2.881  2.904  -0.764 H2  A1ADM 33 
A1ADM H3  H3  H 0 1 N N N N N N 12.057 -7.256 26.359 7.819  3.324  0.516  H3  A1ADM 34 
A1ADM H4  H4  H 0 1 N N N N N N 10.870 -8.363 24.515 8.297  1.004  1.175  H4  A1ADM 35 
A1ADM H5  H5  H 0 1 N N N N N N 12.112 -4.792 26.565 5.591  3.962  -0.249 H5  A1ADM 36 
A1ADM H6  H6  H 0 1 N N N N N N 7.953  0.627  22.382 -0.613 -1.129 -1.660 H6  A1ADM 37 
A1ADM H7  H7  H 0 1 N N N N N N 8.993  -1.023 25.397 3.010  -1.869 -0.795 H7  A1ADM 38 
A1ADM H8  H8  H 0 1 N N N N N N 10.613 -0.280 25.173 2.205  -2.203 0.769  H8  A1ADM 39 
A1ADM H9  H9  H 0 1 N N N N N N 9.369  1.306  27.150 1.592  -4.532 0.786  H9  A1ADM 40 
A1ADM H10 H10 H 0 1 N N N N N N 10.692 1.873  26.076 1.248  -5.400 -0.730 H10 A1ADM 41 
A1ADM H11 H11 H 0 1 N N N N N N 9.216  2.875  26.289 2.860  -4.697 -0.452 H11 A1ADM 42 
A1ADM H12 H12 H 0 1 N N N N N N 10.901 1.742  19.191 -2.836 0.517  1.766  H12 A1ADM 43 
A1ADM H13 H13 H 0 1 N N N N N N 11.699 -2.597 17.407 -5.196 4.350  0.326  H13 A1ADM 44 
A1ADM H14 H14 H 0 1 N N N N N N 12.318 -1.538 16.094 -4.173 3.972  -1.092 H14 A1ADM 45 
A1ADM H15 H15 H 0 1 N N N N N N 9.639  -6.987 22.819 6.542  -0.708 1.074  H15 A1ADM 46 
A1ADM H16 H16 H 0 1 N N N N N N 10.254 2.219  23.633 -0.381 -3.284 0.433  H16 A1ADM 47 
A1ADM H17 H17 H 0 1 N N N N N N 8.516  2.657  23.505 -0.820 -3.422 -1.301 H17 A1ADM 48 
A1ADM H18 H18 H 0 1 N N N N N N 7.257  0.527  26.206 2.603  -3.394 -2.664 H18 A1ADM 49 
A1ADM H19 H19 H 0 1 N N N N N N 7.009  2.023  25.243 1.000  -4.141 -2.867 H19 A1ADM 50 
A1ADM H20 H20 H 0 1 N N N N N N 7.024  0.422  24.428 1.165  -2.368 -2.886 H20 A1ADM 51 
A1ADM H21 H21 H 0 1 N N N N N N 8.178  1.596  20.454 -2.841 -1.257 -0.545 H21 A1ADM 52 
A1ADM H22 H22 H 0 1 N Y N N N N 9.572  3.821  19.795 -2.540 -1.773 2.756  H22 A1ADM 53 
A1ADM H23 H23 H 0 1 N N N N N N 8.351  3.277  18.596 -4.076 -1.006 3.227  H23 A1ADM 54 
A1ADM H24 H24 H 0 1 N N N N N N 9.818  4.826  17.744 -4.397 -3.248 2.469  H24 A1ADM 55 
A1ADM H25 H25 H 0 1 N N N N N N 9.687  1.557  16.991 -5.093 -0.821 0.211  H25 A1ADM 56 
A1ADM H26 H26 H 0 1 N N N N N N 8.207  1.089  17.895 -5.331 0.347  1.532  H26 A1ADM 57 
A1ADM H27 H27 H 0 1 N N N N N N 11.818 -0.613 18.652 -3.010 2.647  0.465  H27 A1ADM 58 
A1ADM H28 H28 H 0 1 N N N N N N 11.672 0.426  17.194 -4.448 2.461  1.523  H28 A1ADM 59 
A1ADM H29 H29 H 0 1 N N N N N N 9.500  -0.846 18.878 -3.714 0.934  -0.997 H29 A1ADM 60 
A1ADM H30 H30 H 0 1 N N N N N N 10.102 -2.330 15.264 -6.735 3.301  -1.336 H30 A1ADM 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ADM N30 C26 SING N N 1  
A1ADM N30 C28 SING N N 2  
A1ADM O31 C26 DOUB N N 3  
A1ADM C26 C29 SING N N 4  
A1ADM C28 C27 SING N N 5  
A1ADM C27 C29 SING N N 6  
A1ADM O24 C23 SING N N 7  
A1ADM C25 C29 SING N N 8  
A1ADM C25 C22 SING N N 9  
A1ADM C23 C22 SING N N 10 
A1ADM C22 N21 SING N N 11 
A1ADM N21 C14 SING N N 12 
A1ADM O15 C14 DOUB N N 13 
A1ADM C14 C13 SING N N 14 
A1ADM O4  C3  DOUB N N 15 
A1ADM C13 N12 SING N N 16 
A1ADM C13 C16 SING N N 17 
A1ADM C3  N12 SING N N 18 
A1ADM C3  C2  SING N N 19 
A1ADM N1  C2  SING Y N 20 
A1ADM N1  C11 SING Y N 21 
A1ADM N12 C17 SING N N 22 
A1ADM C2  C5  DOUB Y N 23 
A1ADM C9  C11 DOUB Y N 24 
A1ADM C9  C7  SING Y N 25 
A1ADM C16 C18 SING N N 26 
A1ADM C11 C10 SING Y N 27 
A1ADM C7  C6  DOUB Y N 28 
A1ADM C5  C10 SING Y N 29 
A1ADM C10 C8  DOUB Y N 30 
A1ADM C17 C18 SING N N 31 
A1ADM C18 C19 SING N N 32 
A1ADM C18 C20 SING N N 33 
A1ADM C6  C8  SING Y N 34 
A1ADM N1  H1  SING N N 35 
A1ADM C5  H2  SING N N 36 
A1ADM C6  H3  SING N N 37 
A1ADM C7  H4  SING N N 38 
A1ADM C8  H5  SING N N 39 
A1ADM C13 H6  SING N N 40 
A1ADM C17 H7  SING N N 41 
A1ADM C17 H8  SING N N 42 
A1ADM C20 H9  SING N N 43 
A1ADM C20 H10 SING N N 44 
A1ADM C20 H11 SING N N 45 
A1ADM C22 H12 SING N N 46 
A1ADM C28 H13 SING N N 47 
A1ADM C28 H14 SING N N 48 
A1ADM C9  H15 SING N N 49 
A1ADM C16 H16 SING N N 50 
A1ADM C16 H17 SING N N 51 
A1ADM C19 H18 SING N N 52 
A1ADM C19 H19 SING N N 53 
A1ADM C19 H20 SING N N 54 
A1ADM N21 H21 SING N N 55 
A1ADM C23 H22 SING N N 56 
A1ADM C23 H23 SING N N 57 
A1ADM O24 H24 SING N N 58 
A1ADM C25 H25 SING N N 59 
A1ADM C25 H26 SING N N 60 
A1ADM C27 H27 SING N N 61 
A1ADM C27 H28 SING N N 62 
A1ADM C29 H29 SING N N 63 
A1ADM N30 H30 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ADM SMILES           ACDLabs              12.01 "CC1(C)CC(C(=O)NC(CC2CCNC2=O)CO)N(C1)C(=O)c1cc2ccccc2[NH]1"                                                                                                                                            
A1ADM InChI            InChI                1.06  "InChI=1S/C23H30N4O4/c1-23(2)11-19(21(30)25-16(12-28)9-15-7-8-24-20(15)29)27(13-23)22(31)18-10-14-5-3-4-6-17(14)26-18/h3-6,10,15-16,19,26,28H,7-9,11-13H2,1-2H3,(H,24,29)(H,25,30)/t15-,16-,19-/m0/s1" 
A1ADM InChIKey         InChI                1.06  VFSCZUUJUPXSPK-BXWFABGCSA-N                                                                                                                                                                            
A1ADM SMILES_CANONICAL CACTVS               3.385 "CC1(C)C[C@H](N(C1)C(=O)c2[nH]c3ccccc3c2)C(=O)N[C@H](CO)C[C@@H]4CCNC4=O"                                                                                                                               
A1ADM SMILES           CACTVS               3.385 "CC1(C)C[CH](N(C1)C(=O)c2[nH]c3ccccc3c2)C(=O)N[CH](CO)C[CH]4CCNC4=O"                                                                                                                                   
A1ADM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(C[C@H](N(C1)C(=O)c2cc3ccccc3[nH]2)C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO)C"                                                                                                                              
A1ADM SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(CC(N(C1)C(=O)c2cc3ccccc3[nH]2)C(=O)NC(CC4CCNC4=O)CO)C"                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1ADM "SYSTEMATIC NAME" ACDLabs              12.01 "N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-1-(1H-indole-2-carbonyl)-4,4-dimethyl-L-prolinamide"                                            
A1ADM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-1-(1~{H}-indol-2-ylcarbonyl)-4,4-dimethyl-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]pyrrolidine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ADM "Create component" 2024-01-22 RCSB 
A1ADM "Initial release"  2024-08-07 RCSB 
A1ADM "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            A1ADM 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C23 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
