data_YFL
# 
_chem_comp.id                                    YFL 
_chem_comp.name                                  "N-[4-(1H-imidazol-1-yl)butyl]-N-({6-[4-(propan-2-yl)anilino]pyridin-3-yl}methyl)acetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H31 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-13 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        405.536 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YFL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G4V 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YFL C01 C1  C 0 1 Y N N N N N -13.905 9.491  48.849 0.218  2.280  0.874  C01 YFL 1  
YFL C02 C2  C 0 1 N N N N N N -13.857 10.565 49.912 -1.205 2.395  1.357  C02 YFL 2  
YFL C04 C3  C 0 1 Y N N N N N -15.190 9.022  48.543 0.826  1.044  0.781  C04 YFL 3  
YFL C06 C4  C 0 1 Y N N N N N -12.988 7.922  47.303 2.233  3.268  0.074  C06 YFL 4  
YFL C10 C5  C 0 1 Y N N N N N -14.305 7.466  46.980 2.784  1.992  0.010  C10 YFL 5  
YFL C11 C6  C 0 1 N N N N N N -11.130 11.984 51.428 -3.999 0.752  0.418  C11 YFL 6  
YFL C15 C7  C 0 1 N N N N N N -9.607  12.194 51.600 -4.530 -0.612 -0.027 C15 YFL 7  
YFL C16 C8  C 0 1 Y N N N N N -13.607 5.672  45.342 4.692  0.566  -0.382 C16 YFL 8  
YFL C17 C9  C 0 1 N N N N N N -9.300  12.312 53.110 -5.904 -0.854 0.601  C17 YFL 9  
YFL C18 C10 C 0 1 Y N N N N N -12.726 6.402  44.532 5.628  0.206  -1.344 C18 YFL 10 
YFL C19 C11 C 0 1 Y N N N N N -13.525 4.255  45.460 4.356  -0.331 0.625  C19 YFL 11 
YFL C21 C12 C 0 1 Y N N N N N -11.738 5.658  43.844 6.221  -1.041 -1.296 C21 YFL 12 
YFL C22 C13 C 0 1 Y N N N N N -12.557 3.509  44.746 4.953  -1.575 0.667  C22 YFL 13 
YFL C23 C14 C 0 1 Y N N N N N -7.119  13.565 53.465 -6.212 -3.357 0.810  C23 YFL 14 
YFL C24 C15 C 0 1 Y N N N N N -7.142  11.426 54.012 -7.166 -2.409 -0.917 C24 YFL 15 
YFL C25 C16 C 0 1 Y N N N N N -11.665 4.252  43.929 5.884  -1.931 -0.292 C25 YFL 16 
YFL C26 C17 C 0 1 Y N N N N N -5.853  13.247 53.967 -6.850 -4.295 0.084  C26 YFL 17 
YFL C28 C18 C 0 1 N N N N N N -10.480 3.532  43.133 6.532  -3.290 -0.244 C28 YFL 18 
YFL C03 C19 C 0 1 Y N N N N N -12.805 8.944  48.224 0.929  3.417  0.512  C03 YFL 19 
YFL N05 N1  N 0 1 N N N N N N -12.987 11.736 49.625 -2.117 2.301  0.215  N05 YFL 20 
YFL N07 N2  N 0 1 Y N N N N N -15.371 8.038  47.619 2.071  0.932  0.360  N07 YFL 21 
YFL C08 C20 C 0 1 N N N N N N -11.519 11.688 49.945 -2.626 0.995  -0.211 C08 YFL 22 
YFL C09 C21 C 0 1 N N N N N N -13.622 12.950 49.096 -2.489 3.417  -0.444 C09 YFL 23 
YFL C12 C22 C 0 1 N N N N N N -15.010 12.896 48.444 -3.337 3.311  -1.685 C12 YFL 24 
YFL O13 O1  O 0 1 N N N N N N -13.027 14.083 49.178 -2.141 4.505  -0.038 O13 YFL 25 
YFL N14 N3  N 0 1 N N N N N N -14.603 6.403  46.058 4.095  1.828  -0.424 N14 YFL 26 
YFL N20 N4  N 0 1 Y N N N N N -7.920  12.412 53.487 -6.412 -2.161 0.175  N20 YFL 27 
YFL N27 N5  N 0 1 Y N N N N N -5.858  11.942 54.315 -7.419 -3.689 -0.968 N27 YFL 28 
YFL C29 C23 C 0 1 N N N N N N -9.888  2.448  44.114 7.283  -3.449 1.080  C29 YFL 29 
YFL C30 C24 C 0 1 N N N N N N -10.943 2.929  41.873 5.456  -4.372 -0.353 C30 YFL 30 
YFL H32 H1  H 0 1 N N N N N N -14.882 10.937 50.060 -1.416 1.588  2.059  H32 YFL 31 
YFL H31 H2  H 0 1 N N N N N N -13.498 10.100 50.842 -1.343 3.354  1.855  H31 YFL 32 
YFL H34 H3  H 0 1 N N N N N N -16.047 9.446  49.046 0.275  0.157  1.058  H34 YFL 33 
YFL H35 H4  H 0 1 N N N N N N -12.131 7.468  46.827 2.816  4.130  -0.212 H35 YFL 34 
YFL H38 H5  H 0 1 N N N N N N -11.653 12.894 51.757 -4.689 1.533  0.096  H38 YFL 35 
YFL H39 H6  H 0 1 N N N N N N -11.444 11.135 52.053 -3.910 0.771  1.504  H39 YFL 36 
YFL H45 H7  H 0 1 N N N N N N -9.063  11.337 51.176 -4.619 -0.630 -1.114 H45 YFL 37 
YFL H44 H8  H 0 1 N N N N N N -9.298  13.115 51.085 -3.841 -1.393 0.294  H44 YFL 38 
YFL H46 H9  H 0 1 N N N N N N -9.812  13.211 53.484 -5.814 -0.836 1.687  H46 YFL 39 
YFL H47 H10 H 0 1 N N N N N N -9.715  11.421 53.604 -6.593 -0.074 0.280  H47 YFL 40 
YFL H48 H11 H 0 1 N N N N N N -12.797 7.476  44.438 5.891  0.900  -2.128 H48 YFL 41 
YFL H49 H12 H 0 1 N N N N N N -14.217 3.738  46.109 3.629  -0.054 1.374  H49 YFL 42 
YFL H50 H13 H 0 1 N N N N N N -11.017 6.183  43.235 6.948  -1.321 -2.043 H50 YFL 43 
YFL H51 H14 H 0 1 N N N N N N -12.500 2.433  44.819 4.692  -2.272 1.449  H51 YFL 44 
YFL H52 H15 H 0 1 N N N N N N -7.430  14.539 53.117 -5.653 -3.517 1.720  H52 YFL 45 
YFL H53 H16 H 0 1 N N N N N N -7.456  10.405 54.173 -7.499 -1.673 -1.634 H53 YFL 46 
YFL H54 H17 H 0 1 N N N N N N -5.018  13.926 54.060 -6.895 -5.350 0.310  H54 YFL 47 
YFL H55 H18 H 0 1 N N N N N N -9.700  4.279  42.926 7.232  -3.388 -1.073 H55 YFL 48 
YFL H33 H19 H 0 1 N N N N N N -11.813 9.306  48.448 0.475  4.395  0.572  H33 YFL 49 
YFL H36 H20 H 0 1 N N N N N N -11.153 10.681 49.696 -1.936 0.214  0.110  H36 YFL 50 
YFL H37 H21 H 0 1 N N N N N N -11.012 12.429 49.310 -2.715 0.976  -1.297 H37 YFL 51 
YFL H41 H22 H 0 1 N N N N N N -15.305 13.906 48.124 -3.625 2.272  -1.841 H41 YFL 52 
YFL H40 H23 H 0 1 N N N N N N -14.979 12.229 47.570 -4.233 3.922  -1.566 H40 YFL 53 
YFL H42 H24 H 0 1 N N N N N N -15.742 12.514 49.171 -2.768 3.664  -2.545 H42 YFL 54 
YFL H43 H25 H 0 1 N N N N N N -15.562 6.162  45.910 4.595  2.590  -0.757 H43 YFL 55 
YFL H57 H26 H 0 1 N N N N N N -9.063  1.916  43.618 6.583  -3.351 1.909  H57 YFL 56 
YFL H58 H27 H 0 1 N N N N N N -9.512  2.942  45.022 7.753  -4.433 1.115  H58 YFL 57 
YFL H56 H28 H 0 1 N N N N N N -10.676 1.730  44.386 8.050  -2.678 1.158  H56 YFL 58 
YFL H61 H29 H 0 1 N N N N N N -10.096 2.448  41.363 4.921  -4.259 -1.296 H61 YFL 59 
YFL H59 H30 H 0 1 N N N N N N -11.716 2.177  42.089 5.925  -5.356 -0.318 H59 YFL 60 
YFL H60 H31 H 0 1 N N N N N N -11.364 3.712  41.225 4.756  -4.274 0.477  H60 YFL 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YFL C01 C02 SING N N 1  
YFL C01 C03 DOUB Y N 2  
YFL C01 C04 SING Y N 3  
YFL C02 N05 SING N N 4  
YFL C03 C06 SING Y N 5  
YFL C04 N07 DOUB Y N 6  
YFL N05 C08 SING N N 7  
YFL N05 C09 SING N N 8  
YFL C06 C10 DOUB Y N 9  
YFL N07 C10 SING Y N 10 
YFL C08 C11 SING N N 11 
YFL C09 C12 SING N N 12 
YFL C09 O13 DOUB N N 13 
YFL C10 N14 SING N N 14 
YFL C11 C15 SING N N 15 
YFL N14 C16 SING N N 16 
YFL C15 C17 SING N N 17 
YFL C16 C18 DOUB Y N 18 
YFL C16 C19 SING Y N 19 
YFL C17 N20 SING N N 20 
YFL C18 C21 SING Y N 21 
YFL C19 C22 DOUB Y N 22 
YFL N20 C23 SING Y N 23 
YFL N20 C24 SING Y N 24 
YFL C21 C25 DOUB Y N 25 
YFL C22 C25 SING Y N 26 
YFL C23 C26 DOUB Y N 27 
YFL C24 N27 DOUB Y N 28 
YFL C26 N27 SING Y N 29 
YFL C25 C28 SING N N 30 
YFL C28 C29 SING N N 31 
YFL C28 C30 SING N N 32 
YFL C02 H32 SING N N 33 
YFL C02 H31 SING N N 34 
YFL C04 H34 SING N N 35 
YFL C06 H35 SING N N 36 
YFL C11 H38 SING N N 37 
YFL C11 H39 SING N N 38 
YFL C15 H45 SING N N 39 
YFL C15 H44 SING N N 40 
YFL C17 H46 SING N N 41 
YFL C17 H47 SING N N 42 
YFL C18 H48 SING N N 43 
YFL C19 H49 SING N N 44 
YFL C21 H50 SING N N 45 
YFL C22 H51 SING N N 46 
YFL C23 H52 SING N N 47 
YFL C24 H53 SING N N 48 
YFL C26 H54 SING N N 49 
YFL C28 H55 SING N N 50 
YFL C03 H33 SING N N 51 
YFL C08 H36 SING N N 52 
YFL C08 H37 SING N N 53 
YFL C12 H41 SING N N 54 
YFL C12 H40 SING N N 55 
YFL C12 H42 SING N N 56 
YFL N14 H43 SING N N 57 
YFL C29 H57 SING N N 58 
YFL C29 H58 SING N N 59 
YFL C29 H56 SING N N 60 
YFL C30 H61 SING N N 61 
YFL C30 H59 SING N N 62 
YFL C30 H60 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YFL SMILES           ACDLabs              12.01 "CC(C)c1ccc(cc1)Nc1ccc(cn1)CN(CCCCn1ccnc1)C(C)=O"                                                                                                                 
YFL InChI            InChI                1.06  "InChI=1S/C24H31N5O/c1-19(2)22-7-9-23(10-8-22)27-24-11-6-21(16-26-24)17-29(20(3)30)14-5-4-13-28-15-12-25-18-28/h6-12,15-16,18-19H,4-5,13-14,17H2,1-3H3,(H,26,27)" 
YFL InChIKey         InChI                1.06  RXDPQGNPSDYGLU-UHFFFAOYSA-N                                                                                                                                       
YFL SMILES_CANONICAL CACTVS               3.385 "CC(C)c1ccc(Nc2ccc(CN(CCCCn3ccnc3)C(C)=O)cn2)cc1"                                                                                                                 
YFL SMILES           CACTVS               3.385 "CC(C)c1ccc(Nc2ccc(CN(CCCCn3ccnc3)C(C)=O)cn2)cc1"                                                                                                                 
YFL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)c1ccc(cc1)Nc2ccc(cn2)CN(CCCCn3ccnc3)C(=O)C"                                                                                                                 
YFL SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)c1ccc(cc1)Nc2ccc(cn2)CN(CCCCn3ccnc3)C(=O)C"                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YFL "SYSTEMATIC NAME" ACDLabs              12.01 "N-[4-(1H-imidazol-1-yl)butyl]-N-({6-[4-(propan-2-yl)anilino]pyridin-3-yl}methyl)acetamide"       
YFL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(4-imidazol-1-ylbutyl)-~{N}-[[6-[(4-propan-2-ylphenyl)amino]pyridin-3-yl]methyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YFL "Create component" 2023-06-13 RCSB 
YFL "Initial release"  2024-12-18 RCSB 
# 
