data_YEL
# 
_chem_comp.id                                    YEL 
_chem_comp.name                                  "5-tert-butyl-2-chloro-4-{[(4S)-7-methyl-8-oxo-5,6,7,8-tetrahydroimidazo[1,5-a]pyrazin-3-yl]methoxy}benzonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H21 Cl N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-13 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        372.849 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YEL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G3K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YEL C10  C1  C  0 1 N N N N N N -11.985 9.253  43.102 -1.073 2.824  1.473  C10  YEL 1  
YEL C13  C2  C  0 1 Y N N N N N -14.790 8.146  46.525 1.872  -0.732 1.041  C13  YEL 2  
YEL C15  C3  C  0 1 Y N N N N N -16.163 9.491  47.479 3.704  -0.282 2.114  C15  YEL 3  
YEL C16  C4  C  0 1 Y N N N N N -14.913 10.019 47.701 4.015  -0.356 0.804  C16  YEL 4  
YEL C18  C5  C  0 1 N N N N N N -12.565 9.315  47.090 2.810  -0.836 -1.325 C18  YEL 5  
YEL C19  C6  C  0 1 N N N N N N -12.173 10.328 48.138 3.915  0.010  -1.957 C19  YEL 6  
YEL C21  C7  C  0 1 N N N N N N -14.448 11.224 48.395 5.281  -0.201 0.078  C21  YEL 7  
YEL C23  C8  C  0 1 N N N N N N -12.472 12.495 49.202 6.423  -0.214 -2.068 C23  YEL 8  
YEL C25  C9  C  0 1 N N N N N N -11.109 3.476  41.313 -5.719 -0.174 -0.568 C25  YEL 9  
YEL C1   C10 C  0 1 Y N N N N N -11.772 5.790  41.766 -3.696 1.171  -0.238 C1   YEL 10 
YEL C2   C11 C  0 1 Y N N N N N -11.780 4.456  42.129 -4.318 -0.079 -0.285 C2   YEL 11 
YEL C3   C12 C  0 1 Y N N N N N -12.440 4.104  43.308 -3.569 -1.238 -0.054 C3   YEL 12 
YEL C4   C13 C  0 1 Y N N N N N -13.082 5.040  44.087 -2.221 -1.141 0.219  C4   YEL 13 
YEL C5   C14 C  0 1 Y N N N N N -13.082 6.360  43.690 -1.608 0.105  0.264  C5   YEL 14 
YEL C6   C15 C  0 1 Y N N N N N -12.403 6.779  42.517 -2.349 1.258  0.035  C6   YEL 15 
YEL C7   C16 C  0 1 N N N N N N -12.395 8.245  42.023 -1.677 2.606  0.084  C7   YEL 16 
YEL C8   C17 C  0 1 N N N N N N -11.426 8.437  40.848 -2.707 3.700  -0.201 C8   YEL 17 
YEL C9   C18 C  0 1 N N N N N N -13.829 8.637  41.577 -0.568 2.662  -0.968 C9   YEL 18 
YEL O11  O1  O  0 1 N N N N N N -13.698 7.350  44.434 -0.280 0.196  0.533  O11  YEL 19 
YEL C12  C19 C  0 1 N N N N N N -14.252 6.984  45.754 0.421  -1.029 0.760  C12  YEL 20 
YEL N14  N1  N  0 1 Y N N N N N -16.073 8.313  46.769 2.390  -0.513 2.228  N14  YEL 21 
YEL N17  N2  N  0 1 Y N N N N N -14.018 9.132  47.090 2.836  -0.655 0.126  N17  YEL 22 
YEL N20  N3  N  0 1 N N N N N N -13.069 11.420 48.419 5.195  -0.136 -1.272 N20  YEL 23 
YEL O22  O2  O  0 1 N N N N N N -15.224 12.014 48.921 6.349  -0.133 0.658  O22  YEL 24 
YEL CL24 CL1 CL 0 0 N N N N N N -12.465 2.464  43.830 -4.336 -2.795 -0.109 CL24 YEL 25 
YEL N26  N4  N  0 1 N N N N N N -10.609 2.669  40.677 -6.830 -0.249 -0.793 N26  YEL 26 
YEL H36  H1  H  0 1 N N N N N N -12.002 10.269 42.681 -0.339 2.044  1.677  H36  YEL 27 
YEL H37  H2  H  0 1 N N N N N N -12.689 9.194  43.945 -0.587 3.799  1.510  H37  YEL 28 
YEL H35  H3  H  0 1 N N N N N N -10.970 9.019  43.455 -1.863 2.784  2.223  H35  YEL 29 
YEL H40  H4  H  0 1 N N N N N N -17.087 9.937  47.814 4.389  -0.073 2.922  H40  YEL 30 
YEL H41  H5  H  0 1 N N N N N N -12.077 8.354  47.311 1.842  -0.520 -1.714 H41  YEL 31 
YEL H42  H6  H  0 1 N N N N N N -12.243 9.671  46.100 2.974  -1.887 -1.564 H42  YEL 32 
YEL H43  H7  H  0 1 N N N N N N -12.028 9.779  49.080 4.037  -0.290 -2.998 H43  YEL 33 
YEL H44  H8  H  0 1 N N N N N N -11.217 10.769 47.820 3.617  1.058  -1.927 H44  YEL 34 
YEL H45  H9  H  0 1 N N N N N N -13.219 13.285 49.371 6.820  0.789  -2.222 H45  YEL 35 
YEL H47  H10 H  0 1 N N N N N N -12.132 12.098 50.170 7.159  -0.820 -1.541 H47  YEL 36 
YEL H46  H11 H  0 1 N N N N N N -11.614 12.913 48.656 6.201  -0.670 -3.033 H46  YEL 37 
YEL H27  H12 H  0 1 N N N N N N -11.255 6.077  40.862 -4.269 2.068  -0.421 H27  YEL 38 
YEL H28  H13 H  0 1 N N N N N N -13.580 4.744  44.998 -1.642 -2.035 0.398  H28  YEL 39 
YEL H29  H14 H  0 1 N N N N N N -11.446 9.488  40.523 -3.497 3.660  0.549  H29  YEL 40 
YEL H31  H15 H  0 1 N N N N N N -10.407 8.171  41.166 -2.221 4.675  -0.165 H31  YEL 41 
YEL H30  H16 H  0 1 N N N N N N -11.730 7.789  40.012 -3.137 3.545  -1.191 H30  YEL 42 
YEL H32  H17 H  0 1 N N N N N N -13.832 9.679  41.224 -0.998 2.507  -1.957 H32  YEL 43 
YEL H33  H18 H  0 1 N N N N N N -14.154 7.973  40.762 -0.082 3.637  -0.932 H33  YEL 44 
YEL H34  H19 H  0 1 N N N N N N -14.518 8.537  42.429 0.166  1.882  -0.765 H34  YEL 45 
YEL H39  H20 H  0 1 N N N N N N -15.068 6.262  45.600 0.345  -1.660 -0.125 H39  YEL 46 
YEL H38  H21 H  0 1 N N N N N N -13.454 6.514  46.347 -0.016 -1.546 1.614  H38  YEL 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YEL C1  C2   DOUB Y N 1  
YEL C1  C6   SING Y N 2  
YEL C2  C3   SING Y N 3  
YEL C2  C25  SING N N 4  
YEL C3  C4   DOUB Y N 5  
YEL C3  CL24 SING N N 6  
YEL C4  C5   SING Y N 7  
YEL C5  C6   DOUB Y N 8  
YEL C5  O11  SING N N 9  
YEL C6  C7   SING N N 10 
YEL C7  C8   SING N N 11 
YEL C7  C9   SING N N 12 
YEL C7  C10  SING N N 13 
YEL O11 C12  SING N N 14 
YEL C12 C13  SING N N 15 
YEL C13 N14  DOUB Y N 16 
YEL C13 N17  SING Y N 17 
YEL N14 C15  SING Y N 18 
YEL C15 C16  DOUB Y N 19 
YEL C16 N17  SING Y N 20 
YEL C16 C21  SING N N 21 
YEL N17 C18  SING N N 22 
YEL C18 C19  SING N N 23 
YEL C19 N20  SING N N 24 
YEL N20 C21  SING N N 25 
YEL N20 C23  SING N N 26 
YEL C21 O22  DOUB N N 27 
YEL C25 N26  TRIP N N 28 
YEL C10 H36  SING N N 29 
YEL C10 H37  SING N N 30 
YEL C10 H35  SING N N 31 
YEL C15 H40  SING N N 32 
YEL C18 H41  SING N N 33 
YEL C18 H42  SING N N 34 
YEL C19 H43  SING N N 35 
YEL C19 H44  SING N N 36 
YEL C23 H45  SING N N 37 
YEL C23 H47  SING N N 38 
YEL C23 H46  SING N N 39 
YEL C1  H27  SING N N 40 
YEL C4  H28  SING N N 41 
YEL C8  H29  SING N N 42 
YEL C8  H31  SING N N 43 
YEL C8  H30  SING N N 44 
YEL C9  H32  SING N N 45 
YEL C9  H33  SING N N 46 
YEL C9  H34  SING N N 47 
YEL C12 H39  SING N N 48 
YEL C12 H38  SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YEL SMILES           ACDLabs              12.01 "CC(C)(C)c1cc(C#N)c(Cl)cc1OCc1ncc2C(=O)N(C)CCn21"                                                                              
YEL InChI            InChI                1.06  "InChI=1S/C19H21ClN4O2/c1-19(2,3)13-7-12(9-21)14(20)8-16(13)26-11-17-22-10-15-18(25)23(4)5-6-24(15)17/h7-8,10H,5-6,11H2,1-4H3" 
YEL InChIKey         InChI                1.06  ZDLQARWVZPMLEH-UHFFFAOYSA-N                                                                                                    
YEL SMILES_CANONICAL CACTVS               3.385 "CN1CCn2c(COc3cc(Cl)c(cc3C(C)(C)C)C#N)ncc2C1=O"                                                                                
YEL SMILES           CACTVS               3.385 "CN1CCn2c(COc3cc(Cl)c(cc3C(C)(C)C)C#N)ncc2C1=O"                                                                                
YEL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2ncc3n2CCN(C3=O)C)Cl)C#N"                                                                                
YEL SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2ncc3n2CCN(C3=O)C)Cl)C#N"                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YEL "SYSTEMATIC NAME" ACDLabs              12.01 "5-tert-butyl-2-chloro-4-{[(4S)-7-methyl-8-oxo-5,6,7,8-tetrahydroimidazo[1,5-a]pyrazin-3-yl]methoxy}benzonitrile"            
YEL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-~{tert}-butyl-2-chloranyl-4-[(7-methyl-8-oxidanylidene-5,6-dihydroimidazo[1,5-a]pyrazin-3-yl)methoxy]benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YEL "Create component" 2023-06-13 RCSB 
YEL "Initial release"  2024-12-18 RCSB 
# 
