data_Y8L
# 
_chem_comp.id                                    Y8L 
_chem_comp.name                                  "3,4-DIMETHYL-5-(2-{[(1Z)-4-PIPERAZIN-1-YLCYCLOHEXA-2,4-DIEN-1-YLIDENE]AMINO}PYRIMIDIN-4-YL)-1,3-THIAZOL-2(3H)-ONE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H22 N6 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-08-01 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        382.483 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y8L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2XNB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y8L C17  C17  C 0 1 N N N 21.030 24.009 29.256 -6.247 -0.341 0.451  C17  Y8L 1  
Y8L C18  C18  C 0 1 N N N 20.870 22.477 29.251 -6.688 -1.799 0.618  C18  Y8L 2  
Y8L N19  N19  N 0 1 N N N 21.724 21.821 28.249 -6.796 -2.430 -0.704 N19  Y8L 3  
Y8L C20  C20  C 0 1 N N N 21.547 22.504 26.975 -5.494 -2.473 -1.382 C20  Y8L 4  
Y8L C21  C21  C 0 1 N N N 22.313 23.826 27.037 -5.004 -1.043 -1.631 C21  Y8L 5  
Y8L N16  N16  N 0 1 N N N 21.999 24.549 28.282 -5.016 -0.315 -0.353 N16  Y8L 6  
Y8L C12  C12  C 0 1 N N N 22.470 25.869 28.457 -3.887 0.384  0.086  C12  Y8L 7  
Y8L C13  C13  C 0 1 N N N 23.389 26.428 27.566 -2.641 0.273  -0.667 C13  Y8L 8  
Y8L C14  C14  C 0 1 N N N 23.819 27.755 27.710 -1.512 0.916  -0.306 C14  Y8L 9  
Y8L C11  C11  C 0 1 N N N 22.009 26.643 29.518 -3.974 1.146  1.186  C11  Y8L 10 
Y8L C10  C10  C 0 1 N N N 22.471 27.957 29.661 -2.746 1.897  1.651  C10  Y8L 11 
Y8L C9   C9   C 0 1 N N N 23.358 28.543 28.754 -1.479 1.743  0.837  C9   Y8L 12 
Y8L N7   N7   N 0 1 N N N 23.753 29.812 28.968 -0.378 2.366  1.184  N7   Y8L 13 
Y8L C4   C4   C 0 1 Y N N 24.842 30.429 28.472 0.722  2.302  0.383  C4   Y8L 14 
Y8L N5   N5   N 0 1 Y N N 25.786 29.832 27.713 1.552  1.272  0.502  N5   Y8L 15 
Y8L N3   N3   N 0 1 Y N N 24.930 31.755 28.691 0.935  3.271  -0.503 N3   Y8L 16 
Y8L C2   C2   C 0 1 Y N N 25.945 32.478 28.244 1.992  3.245  -1.300 C2   Y8L 17 
Y8L C1   C1   C 0 1 Y N N 26.946 31.872 27.505 2.886  2.195  -1.206 C1   Y8L 18 
Y8L C6   C6   C 0 1 Y N N 26.865 30.501 27.258 2.636  1.184  -0.268 C6   Y8L 19 
Y8L C15  C15  C 0 1 N N N 27.837 29.897 26.443 3.559  0.040  -0.134 C15  Y8L 20 
Y8L S23  S23  S 0 1 N N N 29.207 30.663 25.737 5.043  -0.261 -1.056 S23  Y8L 21 
Y8L C24  C24  C 0 1 N N N 29.677 29.286 24.871 5.415  -1.738 -0.252 C24  Y8L 22 
Y8L O28  O28  O 0 1 N N N 30.676 29.188 24.162 6.374  -2.461 -0.456 O28  Y8L 23 
Y8L N25  N25  N 0 1 N N N 28.842 28.279 25.139 4.436  -1.930 0.644  N25  Y8L 24 
Y8L C29  C29  C 0 1 N N N 29.025 26.926 24.541 4.428  -3.105 1.519  C29  Y8L 25 
Y8L C26  C26  C 0 1 N N N 27.837 28.572 25.975 3.458  -0.996 0.715  C26  Y8L 26 
Y8L C27  C27  C 0 1 N N N 26.804 27.516 26.378 2.317  -1.113 1.692  C27  Y8L 27 
Y8L H171 H171 H 0 0 N N N 20.048 24.445 29.023 -7.029 0.222  -0.059 H171 Y8L 28 
Y8L H172 H172 H 0 0 N N N 21.417 24.273 30.251 -6.055 0.098  1.429  H172 Y8L 29 
Y8L H181 H181 H 0 0 N N N 21.145 22.096 30.245 -5.953 -2.335 1.218  H181 Y8L 30 
Y8L H182 H182 H 0 0 N N N 19.824 22.251 28.998 -7.657 -1.831 1.117  H182 Y8L 31 
Y8L H19  H19  H 0 1 N N N 22.682 21.875 28.532 -7.198 -3.353 -0.633 H19  Y8L 32 
Y8L H201 H201 H 0 0 N N N 21.939 21.881 26.157 -4.775 -3.000 -0.754 H201 Y8L 33 
Y8L H202 H202 H 0 0 N N N 20.479 22.690 26.787 -5.596 -2.994 -2.334 H202 Y8L 34 
Y8L H211 H211 H 0 0 N N N 23.393 23.618 27.004 -3.989 -1.067 -2.029 H211 Y8L 35 
Y8L H212 H212 H 0 0 N N N 22.017 24.449 26.180 -5.666 -0.548 -2.341 H212 Y8L 36 
Y8L H13  H13  H 0 1 N N N 23.774 25.829 26.754 -2.623 -0.350 -1.549 H13  Y8L 37 
Y8L H11  H11  H 0 1 N N N 21.302 26.234 30.224 -4.904 1.222  1.731  H11  Y8L 38 
Y8L H14  H14  H 0 1 N N N 24.518 28.169 26.999 -0.618 0.796  -0.901 H14  Y8L 39 
Y8L H101 H101 H 0 0 N N N 21.570 28.587 29.635 -2.995 2.957  1.681  H101 Y8L 40 
Y8L H102 H102 H 0 0 N N N 23.079 27.894 30.576 -2.528 1.581  2.671  H102 Y8L 41 
Y8L H2   H2   H 0 1 N N N 25.992 33.536 28.455 2.154  4.037  -2.016 H2   Y8L 42 
Y8L H1   H1   H 0 1 N N N 27.776 32.450 27.126 3.756  2.151  -1.845 H1   Y8L 43 
Y8L H291 H291 H 0 0 N N N 29.070 27.012 23.445 5.299  -3.724 1.305  H291 Y8L 44 
Y8L H292 H292 H 0 0 N N N 29.961 26.485 24.913 4.458  -2.783 2.560  H292 Y8L 45 
Y8L H293 H293 H 0 0 N N N 28.178 26.283 24.824 3.520  -3.682 1.344  H293 Y8L 46 
Y8L H271 H271 H 0 0 N N N 26.556 26.893 25.506 1.497  -1.663 1.229  H271 Y8L 47 
Y8L H272 H272 H 0 0 N N N 27.220 26.882 27.175 2.654  -1.645 2.582  H272 Y8L 48 
Y8L H273 H273 H 0 0 N N N 25.894 28.014 26.743 1.974  -0.117 1.972  H273 Y8L 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y8L C17 C18  SING N N 1  
Y8L C17 N16  SING N N 2  
Y8L C18 N19  SING N N 3  
Y8L N19 C20  SING N N 4  
Y8L C20 C21  SING N N 5  
Y8L C21 N16  SING N N 6  
Y8L N16 C12  SING N N 7  
Y8L C12 C13  SING N N 8  
Y8L C12 C11  DOUB N N 9  
Y8L C13 C14  DOUB N N 10 
Y8L C14 C9   SING N N 11 
Y8L C11 C10  SING N N 12 
Y8L C10 C9   SING N N 13 
Y8L C9  N7   DOUB N N 14 
Y8L N7  C4   SING N N 15 
Y8L C4  N5   SING Y N 16 
Y8L C4  N3   DOUB Y N 17 
Y8L N5  C6   DOUB Y N 18 
Y8L N3  C2   SING Y N 19 
Y8L C2  C1   DOUB Y N 20 
Y8L C1  C6   SING Y N 21 
Y8L C6  C15  SING N N 22 
Y8L C15 S23  SING N N 23 
Y8L C15 C26  DOUB N N 24 
Y8L S23 C24  SING N N 25 
Y8L C24 O28  DOUB N N 26 
Y8L C24 N25  SING N N 27 
Y8L N25 C29  SING N N 28 
Y8L N25 C26  SING N N 29 
Y8L C26 C27  SING N N 30 
Y8L C17 H171 SING N N 31 
Y8L C17 H172 SING N N 32 
Y8L C18 H181 SING N N 33 
Y8L C18 H182 SING N N 34 
Y8L N19 H19  SING N N 35 
Y8L C20 H201 SING N N 36 
Y8L C20 H202 SING N N 37 
Y8L C21 H211 SING N N 38 
Y8L C21 H212 SING N N 39 
Y8L C13 H13  SING N N 40 
Y8L C11 H11  SING N N 41 
Y8L C14 H14  SING N N 42 
Y8L C10 H101 SING N N 43 
Y8L C10 H102 SING N N 44 
Y8L C2  H2   SING N N 45 
Y8L C1  H1   SING N N 46 
Y8L C29 H291 SING N N 47 
Y8L C29 H292 SING N N 48 
Y8L C29 H293 SING N N 49 
Y8L C27 H271 SING N N 50 
Y8L C27 H272 SING N N 51 
Y8L C27 H273 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y8L SMILES           ACDLabs              10.04 "O=C4SC(c3nc(/N=C2\C=CC(N1CCNCC1)=CC2)ncc3)=C(N4C)C"                                                                                         
Y8L SMILES_CANONICAL CACTVS               3.352 "CN1C(=O)SC(=C1C)c2ccnc(N=C3CC=C(C=C3)N4CCNCC4)n2"                                                                                           
Y8L SMILES           CACTVS               3.352 "CN1C(=O)SC(=C1C)c2ccnc(N=C3CC=C(C=C3)N4CCNCC4)n2"                                                                                           
Y8L SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "CC1=C(SC(=O)N1C)c2ccnc(n2)N=C3CC=C(C=C3)N4CCNCC4"                                                                                           
Y8L SMILES           "OpenEye OEToolkits" 1.6.1 "CC1=C(SC(=O)N1C)c2ccnc(n2)N=C3CC=C(C=C3)N4CCNCC4"                                                                                           
Y8L InChI            InChI                1.03  "InChI=1S/C19H22N6OS/c1-13-17(27-19(26)24(13)2)16-7-8-21-18(23-16)22-14-3-5-15(6-4-14)25-11-9-20-10-12-25/h3,5-8,20H,4,9-12H2,1-2H3/b22-14+" 
Y8L InChIKey         InChI                1.03  SNCJEJRBHBIGKH-HYARGMPZSA-N                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y8L "SYSTEMATIC NAME" ACDLabs              10.04 "3,4-dimethyl-5-(2-{[(1Z)-4-piperazin-1-ylcyclohexa-2,4-dien-1-ylidene]amino}pyrimidin-4-yl)-1,3-thiazol-2(3H)-one" 
Y8L "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "3,4-dimethyl-5-[2-[(4-piperazin-1-yl-1-cyclohexa-2,4-dienylidene)amino]pyrimidin-4-yl]-1,3-thiazol-2-one"          
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y8L "Create component"     2010-08-01 EBI  
Y8L "Modify aromatic_flag" 2011-06-04 RCSB 
Y8L "Modify descriptor"    2011-06-04 RCSB 
# 
