data_Y1L
# 
_chem_comp.id                                    Y1L 
_chem_comp.name                                  "(5-chloro-1-benzothiophen-3-yl)methanol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H7 Cl O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-14 
_chem_comp.pdbx_modified_date                    2024-02-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        198.669 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y1L 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GRJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y1L C02  C1  C  0 1 N N N N N N -24.038 -4.061 -28.660 -1.936 2.096  0.002  C02  Y1L 1  
Y1L C03  C2  C  0 1 Y N N N N N -23.705 -4.458 -30.135 -1.644 0.618  0.002  C03  Y1L 2  
Y1L C04  C3  C  0 1 Y N N N N N -24.019 -5.789 -30.677 -2.597 -0.293 -0.001 C04  Y1L 3  
Y1L C06  C4  C  0 1 Y N N N N N -22.886 -4.152 -32.342 -0.280 -1.310 -0.000 C06  Y1L 4  
Y1L C07  C5  C  0 1 Y N N N N N -22.283 -3.415 -33.369 0.939  -1.995 0.001  C07  Y1L 5  
Y1L C08  C6  C  0 1 Y N N N N N -21.887 -2.128 -33.151 2.124  -1.298 0.000  C08  Y1L 6  
Y1L C09  C7  C  0 1 Y N N N N N -22.070 -1.536 -31.893 2.117  0.091  -0.001 C09  Y1L 7  
Y1L C11  C8  C  0 1 Y N N N N N -22.668 -2.263 -30.863 0.941  0.778  -0.001 C11  Y1L 8  
Y1L C12  C9  C  0 1 Y N N N N N -23.078 -3.576 -31.077 -0.290 0.087  -0.001 C12  Y1L 9  
Y1L O01  O1  O  0 1 N N N N N N -22.908 -3.392 -28.066 -3.349 2.303  -0.001 O01  Y1L 10 
Y1L S05  S1  S  0 1 Y N N N N N -23.508 -5.779 -32.260 -1.931 -1.915 0.000  S05  Y1L 11 
Y1L CL10 CL1 CL 0 0 N N N N N N -21.543 0.097  -31.664 3.621  0.959  -0.000 CL10 Y1L 12 
Y1L H1   H1  H  0 1 N N N N N N -24.907 -3.387 -28.651 -1.504 2.552  0.893  H1   Y1L 13 
Y1L H2   H2  H  0 1 N N N N N N -24.271 -4.967 -28.082 -1.500 2.553  -0.887 H2   Y1L 14 
Y1L H3   H3  H  0 1 N N N N N N -24.487 -6.609 -30.152 -3.653 -0.069 -0.004 H3   Y1L 15 
Y1L H4   H4  H  0 1 N N N N N N -22.131 -3.868 -34.338 0.950  -3.075 0.001  H4   Y1L 16 
Y1L H5   H5  H  0 1 N N N N N N -21.431 -1.563 -33.950 3.063  -1.832 0.001  H5   Y1L 17 
Y1L H6   H6  H  0 1 N N N N N N -22.813 -1.805 -29.896 0.951  1.858  -0.001 H6   Y1L 18 
Y1L H7   H7  H  0 1 N N N N N N -23.116 -3.153 -27.170 -3.611 3.234  -0.001 H7   Y1L 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y1L C07 C08  DOUB Y N 1  
Y1L C07 C06  SING Y N 2  
Y1L C08 C09  SING Y N 3  
Y1L C06 S05  SING Y N 4  
Y1L C06 C12  DOUB Y N 5  
Y1L S05 C04  SING Y N 6  
Y1L C09 CL10 SING N N 7  
Y1L C09 C11  DOUB Y N 8  
Y1L C12 C11  SING Y N 9  
Y1L C12 C03  SING Y N 10 
Y1L C04 C03  DOUB Y N 11 
Y1L C03 C02  SING N N 12 
Y1L C02 O01  SING N N 13 
Y1L C02 H1   SING N N 14 
Y1L C02 H2   SING N N 15 
Y1L C04 H3   SING N N 16 
Y1L C07 H4   SING N N 17 
Y1L C08 H5   SING N N 18 
Y1L C11 H6   SING N N 19 
Y1L O01 H7   SING N N 20 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y1L SMILES           ACDLabs              12.01 "Clc1cc2c(cc1)scc2CO"                                              
Y1L InChI            InChI                1.06  "InChI=1S/C9H7ClOS/c10-7-1-2-9-8(3-7)6(4-11)5-12-9/h1-3,5,11H,4H2" 
Y1L InChIKey         InChI                1.06  PUSCUZZEDIEHOQ-UHFFFAOYSA-N                                        
Y1L SMILES_CANONICAL CACTVS               3.385 "OCc1csc2ccc(Cl)cc12"                                              
Y1L SMILES           CACTVS               3.385 "OCc1csc2ccc(Cl)cc12"                                              
Y1L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)c(cs2)CO"                                            
Y1L SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)c(cs2)CO"                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y1L "SYSTEMATIC NAME" ACDLabs              12.01 "(5-chloro-1-benzothiophen-3-yl)methanol"    
Y1L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5-chloranyl-1-benzothiophen-3-yl)methanol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y1L "Create component" 2023-11-14 RCSB 
Y1L "Initial release"  2024-02-14 RCSB 
# 
