data_WXL
# 
_chem_comp.id                                    WXL 
_chem_comp.name                                  "[(~{Z})-4-[2-azanyl-7-[(5-chloranyl-1~{H}-indol-2-yl)methyl]-6-oxidanylidene-1~{H}-purin-9-yl]but-2-enyl]phosphonic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H19 Cl N6 O4 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2023-05-22 
_chem_comp.pdbx_modified_date                    2023-06-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        449.808 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WXL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8SX4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WXL C4  C1  C  0 1 N N N 20.822 12.833 -11.508 2.754  -0.233 0.475  C4  WXL 1  
WXL C5  C2  C  0 1 N N N 22.201 12.260 -11.599 3.923  -0.786 -0.299 C5  WXL 2  
WXL C6  C3  C  0 1 N N N 23.351 12.934 -11.578 4.854  0.020  -0.744 C6  WXL 3  
WXL N1  N1  N  0 1 N N N 15.964 10.797 -11.214 0.770  -4.985 1.880  N1  WXL 4  
WXL C7  C4  C  0 1 N N N 23.510 14.420 -11.427 4.850  1.472  -0.340 C7  WXL 5  
WXL C8  C5  C  0 1 Y N N 20.750 12.907 -9.018  0.799  -0.043 -1.006 C8  WXL 6  
WXL N2  N2  N  0 1 N N N 18.087 11.639 -10.905 1.209  -2.908 0.959  N2  WXL 7  
WXL O   O1  O  0 1 N N N 17.132 11.705 -6.888  -2.103 -3.147 -1.200 O   WXL 8  
WXL C3  C6  C  0 1 Y N N 18.947 12.068 -9.964  0.910  -1.878 0.144  C3  WXL 9  
WXL C2  C7  C  0 1 Y N N 18.740 12.107 -8.623  -0.252 -1.934 -0.632 C2  WXL 10 
WXL N   N3  N  0 1 N N N 16.636 11.254 -9.058  -0.719 -4.061 0.302  N   WXL 11 
WXL C1  C8  C  0 1 N N N 16.923 11.237 -10.397 0.426  -3.958 1.035  C1  WXL 12 
WXL C   C9  C  0 1 N N N 17.493 11.687 -8.063  -1.081 -3.065 -0.539 C   WXL 13 
WXL CL  CL1 CL 0 0 N N N 22.812 6.833  -2.830  -7.658 1.656  1.620  CL  WXL 14 
WXL C14 C10 C  0 1 Y N N 22.666 8.271  -3.806  -6.168 1.729  0.733  C14 WXL 15 
WXL C13 C11 C  0 1 Y N N 21.442 8.913  -3.875  -5.576 0.566  0.291  C13 WXL 16 
WXL C15 C12 C  0 1 Y N N 23.786 8.751  -4.467  -5.582 2.960  0.467  C15 WXL 17 
WXL C16 C13 C  0 1 Y N N 23.692 9.911  -5.224  -4.399 3.038  -0.236 C16 WXL 18 
WXL C17 C14 C  0 1 Y N N 22.461 10.550 -5.321  -3.782 1.876  -0.687 C17 WXL 19 
WXL C12 C15 C  0 1 Y N N 21.323 10.066 -4.650  -4.378 0.629  -0.423 C12 WXL 20 
WXL C11 C16 C  0 1 Y N N 20.232 10.927 -5.016  -3.495 -0.376 -1.020 C11 WXL 21 
WXL N5  N4  N  0 1 Y N N 22.074 11.645 -6.081  -2.627 1.632  -1.396 N5  WXL 22 
WXL C10 C17 C  0 1 Y N N 20.738 11.895 -5.917  -2.471 0.286  -1.582 C10 WXL 23 
WXL C9  C18 C  0 1 N N N 20.061 13.014 -6.637  -1.323 -0.359 -2.315 C9  WXL 24 
WXL N4  N5  N  0 1 Y N N 19.888 12.626 -8.043  -0.291 -0.757 -1.353 N4  WXL 25 
WXL N3  N6  N  1 1 Y N N 20.199 12.583 -10.194 1.503  -0.703 -0.126 N3  WXL 26 
WXL P   P1  P  0 1 N N N 24.828 14.888 -10.297 6.474  1.912  0.363  P   WXL 27 
WXL O3  O2  O  0 1 N N N 26.169 14.814 -10.958 7.539  1.572  -0.607 O3  WXL 28 
WXL O2  O3  O  0 1 N N N 24.508 16.326 -9.821  6.514  3.491  0.673  O2  WXL 29 
WXL O1  O4  O  0 1 N N N 24.703 13.962 -9.059  6.708  1.091  1.727  O1  WXL 30 
WXL H1  H1  H  0 1 N N N 20.878 13.919 -11.672 2.810  -0.572 1.509  H1  WXL 31 
WXL H2  H2  H  0 1 N N N 20.197 12.376 -12.289 2.783  0.857  0.448  H2  WXL 32 
WXL H3  H3  H  0 1 N N N 22.272 11.186 -11.692 3.992  -1.847 -0.486 H3  WXL 33 
WXL H4  H4  H  0 1 N N N 24.257 12.355 -11.679 5.625  -0.356 -1.401 H4  WXL 34 
WXL H5  H5  H  0 1 N N N 16.121 10.770 -12.201 1.581  -4.927 2.409  H5  WXL 35 
WXL H6  H6  H  0 1 N N N 15.088 10.494 -10.839 0.202  -5.768 1.947  H6  WXL 36 
WXL H7  H7  H  0 1 N N N 23.730 14.849 -12.416 4.653  2.092  -1.215 H7  WXL 37 
WXL H8  H8  H  0 1 N N N 22.564 14.835 -11.050 4.074  1.640  0.406  H8  WXL 38 
WXL H9  H9  H  0 1 N N N 21.735 13.328 -8.882  1.054  0.930  -1.400 H9  WXL 39 
WXL H10 H10 H  0 1 N N N 15.734 10.927 -8.777  -1.275 -4.851 0.382  H10 WXL 40 
WXL H11 H11 H  0 1 N N N 20.590 8.526  -3.336  -6.036 -0.389 0.496  H11 WXL 41 
WXL H12 H12 H  0 1 N N N 24.727 8.225  -4.393  -6.057 3.865  0.815  H12 WXL 42 
WXL H13 H13 H  0 1 N N N 24.560 10.310 -5.729  -3.953 4.000  -0.437 H13 WXL 43 
WXL H14 H14 H  0 1 N N N 19.213 10.850 -4.668  -3.641 -1.446 -1.011 H14 WXL 44 
WXL H15 H15 H  0 1 N N N 22.686 12.177 -6.667  -2.013 2.313  -1.713 H15 WXL 45 
WXL H16 H16 H  0 1 N N N 20.679 13.922 -6.576  -1.681 -1.240 -2.848 H16 WXL 46 
WXL H17 H17 H  0 1 N N N 19.078 13.208 -6.182  -0.901 0.351  -3.026 H17 WXL 47 
WXL H18 H18 H  0 1 N N N 25.232 16.901 -10.040 7.351  3.797  1.049  H18 WXL 48 
WXL H19 H19 H  0 1 N N N 25.520 13.495 -8.929  6.045  1.265  2.410  H19 WXL 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WXL C5  C6  DOUB N Z 1  
WXL C5  C4  SING N N 2  
WXL C6  C7  SING N N 3  
WXL C4  N3  SING N N 4  
WXL C7  P   SING N N 5  
WXL N1  C1  SING N N 6  
WXL O3  P   DOUB N N 7  
WXL N2  C1  DOUB N N 8  
WXL N2  C3  SING N N 9  
WXL C1  N   SING N N 10 
WXL P   O2  SING N N 11 
WXL P   O1  SING N N 12 
WXL N3  C3  SING Y N 13 
WXL N3  C8  DOUB Y N 14 
WXL C3  C2  DOUB Y N 15 
WXL N   C   SING N N 16 
WXL C8  N4  SING Y N 17 
WXL C2  C   SING N N 18 
WXL C2  N4  SING Y N 19 
WXL C   O   DOUB N N 20 
WXL N4  C9  SING N N 21 
WXL C9  C10 SING N N 22 
WXL N5  C10 SING Y N 23 
WXL N5  C17 SING Y N 24 
WXL C10 C11 DOUB Y N 25 
WXL C17 C16 DOUB Y N 26 
WXL C17 C12 SING Y N 27 
WXL C16 C15 SING Y N 28 
WXL C11 C12 SING Y N 29 
WXL C12 C13 DOUB Y N 30 
WXL C15 C14 DOUB Y N 31 
WXL C13 C14 SING Y N 32 
WXL C14 CL  SING N N 33 
WXL C4  H1  SING N N 34 
WXL C4  H2  SING N N 35 
WXL C5  H3  SING N N 36 
WXL C6  H4  SING N N 37 
WXL N1  H5  SING N N 38 
WXL N1  H6  SING N N 39 
WXL C7  H7  SING N N 40 
WXL C7  H8  SING N N 41 
WXL C8  H9  SING N N 42 
WXL N   H10 SING N N 43 
WXL C13 H11 SING N N 44 
WXL C15 H12 SING N N 45 
WXL C16 H13 SING N N 46 
WXL C11 H14 SING N N 47 
WXL N5  H15 SING N N 48 
WXL C9  H16 SING N N 49 
WXL C9  H17 SING N N 50 
WXL O2  H18 SING N N 51 
WXL O1  H19 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WXL SMILES           ACDLabs              12.01 "O=P(O)(O)C\C=C/C[n+]1cn(Cc2cc3cc(Cl)ccc3[NH]2)c2C(=O)NC(N)=Nc21"                                                                                                                   
WXL InChI            InChI                1.06  "InChI=1S/C18H18ClN6O4P/c19-12-3-4-14-11(7-12)8-13(21-14)9-25-10-24(5-1-2-6-30(27,28)29)16-15(25)17(26)23-18(20)22-16/h1-4,7-8,10,21H,5-6,9H2,(H4-,20,22,23,26,27,28,29)/p+1/b2-1-" 
WXL InChIKey         InChI                1.06  JSTMWLOUXSFOCX-UPHRSURJSA-O                                                                                                                                                         
WXL SMILES_CANONICAL CACTVS               3.385 "NC1=Nc2c(n(Cc3[nH]c4ccc(Cl)cc4c3)c[n+]2C\C=C/C[P](O)(O)=O)C(=O)N1"                                                                                                                 
WXL SMILES           CACTVS               3.385 "NC1=Nc2c(n(Cc3[nH]c4ccc(Cl)cc4c3)c[n+]2CC=CC[P](O)(O)=O)C(=O)N1"                                                                                                                   
WXL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)cc([nH]2)Cn3c[n+](c4c3C(=O)NC(=N4)N)C/C=C\CP(=O)(O)O"                                                                                                                 
WXL SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Cl)cc([nH]2)Cn3c[n+](c4c3C(=O)NC(=N4)N)CC=CCP(=O)(O)O"                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WXL "SYSTEMATIC NAME" ACDLabs              12.01 "2-amino-7-[(5-chloro-1H-indol-2-yl)methyl]-6-oxo-9-[(2Z)-4-phosphonobut-2-en-1-yl]-6,7-dihydro-1H-purin-9-ium"                  
WXL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(~{Z})-4-[2-azanyl-7-[(5-chloranyl-1~{H}-indol-2-yl)methyl]-6-oxidanylidene-1~{H}-purin-9-ium-9-yl]but-2-enyl]phosphonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WXL "Create component" 2023-05-22 RCSB 
WXL "Initial release"  2023-06-21 RCSB 
# 
