data_UBL
# 
_chem_comp.id                                    UBL 
_chem_comp.name                                  "[(2R)-2-oxidanyl-3-phosphonooxy-propyl] (Z)-octadec-9-enoate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H41 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-25 
_chem_comp.pdbx_modified_date                    2023-10-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        436.520 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UBL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8IZB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UBL OAA O1  O 0 1 N N N 97.018  106.293 63.576 11.011  0.874  1.526  OAA UBL 1  
UBL OAB O2  O 0 1 N N N 97.260  104.097 64.649 11.051  -0.457 -0.618 OAB UBL 2  
UBL PAC P1  P 0 1 N N N 97.228  105.581 64.887 10.675  0.856  -0.049 PAC UBL 3  
UBL OAE O3  O 0 1 N N N 103.462 107.067 64.649 3.466   -1.706 0.552  OAE UBL 4  
UBL OAF O4  O 0 1 N N N 98.672  106.054 65.554 9.099   1.104  -0.264 OAF UBL 5  
UBL CAG C1  C 0 1 N N N 99.126  105.384 66.712 8.099   0.186  0.183  CAG UBL 6  
UBL CAH C2  C 0 1 N N R 100.483 104.721 66.348 6.714   0.725  -0.181 CAH UBL 7  
UBL CAI C3  C 0 1 N N N 101.552 105.755 65.912 5.651   -0.313 0.185  CAI UBL 8  
UBL OAJ O5  O 0 1 N N N 102.524 105.078 65.135 4.350   0.147  -0.267 OAJ UBL 9  
UBL CAK C4  C 0 1 N N N 103.609 105.896 64.746 3.302   -0.655 -0.022 CAK UBL 10 
UBL CAL C5  C 0 1 N N N 104.990 105.279 64.452 1.920   -0.244 -0.461 CAL UBL 11 
UBL CAM C6  C 0 1 N N N 106.132 106.131 65.059 0.915   -1.326 -0.063 CAM UBL 12 
UBL CAN C7  C 0 1 N N N 106.304 105.897 66.586 -0.488  -0.909 -0.509 CAN UBL 13 
UBL CAO C8  C 0 1 N N N 107.748 106.243 67.062 -1.493  -1.992 -0.111 CAO UBL 14 
UBL CAP C9  C 0 1 N N N 108.312 105.205 68.075 -2.896  -1.575 -0.557 CAP UBL 15 
UBL CAQ C10 C 0 1 N N N 108.064 105.621 69.553 -3.901  -2.657 -0.159 CAQ UBL 16 
UBL CAR C11 C 0 1 N N N 109.240 105.175 70.459 -5.303  -2.240 -0.605 CAR UBL 17 
UBL CAS C12 C 0 1 N N N 108.771 104.745 71.879 -6.293  -3.306 -0.213 CAS UBL 18 
UBL CAT C13 C 0 1 N N N 108.953 104.586 73.199 -7.365  -2.986 0.469  CAT UBL 19 
UBL CAU C14 C 0 1 N N N 110.359 105.051 73.656 -7.697  -1.537 0.714  CAU UBL 20 
UBL CAV C15 C 0 1 N N N 110.325 105.685 75.076 -9.126  -1.255 0.246  CAV UBL 21 
UBL CAW C16 C 0 1 N N N 111.213 104.883 76.074 -9.463  0.217  0.496  CAW UBL 22 
UBL CAX C17 C 0 1 N N N 112.529 105.607 76.496 -10.892 0.499  0.028  CAX UBL 23 
UBL CAY C18 C 0 1 N N N 112.681 105.688 78.051 -11.229 1.971  0.277  CAY UBL 24 
UBL CAZ C19 C 0 1 N N N 114.083 105.242 78.570 -12.658 2.253  -0.190 CAZ UBL 25 
UBL CBA C20 C 0 1 N N N 114.263 105.525 80.089 -12.995 3.725  0.059  CBA UBL 26 
UBL CBB C21 C 0 1 N N N 115.466 104.757 80.695 -14.424 4.007  -0.409 CBB UBL 27 
UBL OBC O6  O 0 1 N N N 100.967 104.075 67.503 6.468   1.933  0.542  OBC UBL 28 
UBL H1  H1  H 0 1 N N N 96.950  105.655 62.876 10.791  1.706  1.966  H1  UBL 29 
UBL H3  H3  H 0 1 N N N 99.264  106.101 67.534 8.251   -0.780 -0.299 H3  UBL 30 
UBL H4  H4  H 0 1 N N N 98.399  104.616 67.014 8.171   0.069  1.264  H4  UBL 31 
UBL H5  H5  H 0 1 N N N 100.323 104.002 65.531 6.672   0.927  -1.251 H5  UBL 32 
UBL H6  H6  H 0 1 N N N 102.026 106.199 66.800 5.889   -1.262 -0.297 H6  UBL 33 
UBL H7  H7  H 0 1 N N N 101.081 106.548 65.313 5.633   -0.449 1.266  H7  UBL 34 
UBL H8  H8  H 0 1 N N N 105.029 104.268 64.884 1.650   0.697  0.019  H8  UBL 35 
UBL H9  H9  H 0 1 N N N 105.130 105.218 63.363 1.906   -0.116 -1.544 H9  UBL 36 
UBL H10 H10 H 0 1 N N N 107.074 105.869 64.554 1.184   -2.267 -0.544 H10 UBL 37 
UBL H11 H11 H 0 1 N N N 105.908 107.194 64.888 0.929   -1.454 1.019  H11 UBL 38 
UBL H12 H12 H 0 1 N N N 105.588 106.533 67.127 -0.757  0.031  -0.029 H12 UBL 39 
UBL H13 H13 H 0 1 N N N 106.098 104.840 66.810 -0.502  -0.781 -1.592 H13 UBL 40 
UBL H14 H14 H 0 1 N N N 108.410 106.273 66.184 -1.223  -2.932 -0.591 H14 UBL 41 
UBL H15 H15 H 0 1 N N N 107.732 107.232 67.544 -1.479  -2.120 0.971  H15 UBL 42 
UBL H16 H16 H 0 1 N N N 107.825 104.235 67.895 -3.165  -0.634 -0.077 H16 UBL 43 
UBL H17 H17 H 0 1 N N N 109.396 105.107 67.913 -2.909  -1.447 -1.640 H17 UBL 44 
UBL H18 H18 H 0 1 N N N 107.963 106.715 69.607 -3.631  -3.598 -0.640 H18 UBL 45 
UBL H19 H19 H 0 1 N N N 107.136 105.149 69.909 -3.887  -2.785 0.923  H19 UBL 46 
UBL H20 H20 H 0 1 N N N 109.748 104.324 69.983 -5.573  -1.300 -0.125 H20 UBL 47 
UBL H21 H21 H 0 1 N N N 109.945 106.013 70.560 -5.317  -2.112 -1.688 H21 UBL 48 
UBL H22 H22 H 0 1 N N N 107.767 104.382 71.716 -6.119  -4.335 -0.494 H22 UBL 49 
UBL H24 H24 H 0 1 N N N 108.206 104.181 73.866 -8.011  -3.761 0.855  H24 UBL 50 
UBL H26 H26 H 0 1 N N N 111.034 104.183 73.670 -7.614  -1.320 1.779  H26 UBL 51 
UBL H27 H27 H 0 1 N N N 110.737 105.798 72.942 -7.002  -0.906 0.160  H27 UBL 52 
UBL H28 H28 H 0 1 N N N 110.697 106.719 75.016 -9.209  -1.471 -0.819 H28 UBL 53 
UBL H29 H29 H 0 1 N N N 109.288 105.689 75.442 -9.821  -1.885 0.801  H29 UBL 54 
UBL H30 H30 H 0 1 N N N 110.621 104.689 76.981 -9.380  0.433  1.561  H30 UBL 55 
UBL H31 H31 H 0 1 N N N 111.483 103.927 75.602 -8.768  0.848  -0.059 H31 UBL 56 
UBL H32 H32 H 0 1 N N N 113.386 105.054 76.084 -10.976 0.283  -1.037 H32 UBL 57 
UBL H33 H33 H 0 1 N N N 112.520 106.628 76.086 -11.587 -0.132 0.582  H33 UBL 58 
UBL H34 H34 H 0 1 N N N 112.511 106.729 78.362 -11.146 2.187  1.342  H34 UBL 59 
UBL H35 H35 H 0 1 N N N 111.919 105.039 78.508 -10.534 2.602  -0.277 H35 UBL 60 
UBL H36 H36 H 0 1 N N N 114.199 104.162 78.394 -12.741 2.037  -1.255 H36 UBL 61 
UBL H37 H37 H 0 1 N N N 114.858 105.789 78.013 -13.353 1.622  0.364  H37 UBL 62 
UBL H38 H38 H 0 1 N N N 114.425 106.604 80.231 -12.912 3.941  1.124  H38 UBL 63 
UBL H39 H39 H 0 1 N N N 113.347 105.220 80.616 -12.300 4.355  -0.496 H39 UBL 64 
UBL H40 H40 H 0 1 N N N 115.549 104.991 81.767 -14.508 3.790  -1.474 H40 UBL 65 
UBL H41 H41 H 0 1 N N N 115.312 103.675 80.567 -15.119 3.376  0.146  H41 UBL 66 
UBL H42 H42 H 0 1 N N N 116.390 105.060 80.181 -14.664 5.055  -0.231 H42 UBL 67 
UBL H43 H43 H 0 1 N N N 100.332 103.432 67.797 6.490   1.829  1.503  H43 UBL 68 
UBL O1  O7  O 0 1 N N N 95.990  105.978 65.924 11.508  2.019  -0.788 O1  UBL 69 
UBL H2  H2  H 0 1 N N N 95.525  105.190 66.179 12.467  1.934  -0.700 H2  UBL 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UBL OAA PAC SING N N 1  
UBL CAL CAK SING N N 2  
UBL CAL CAM SING N N 3  
UBL OAB PAC DOUB N N 4  
UBL OAE CAK DOUB N N 5  
UBL CAK OAJ SING N N 6  
UBL PAC OAF SING N N 7  
UBL CAM CAN SING N N 8  
UBL OAJ CAI SING N N 9  
UBL OAF CAG SING N N 10 
UBL CAI CAH SING N N 11 
UBL CAH CAG SING N N 12 
UBL CAH OBC SING N N 13 
UBL CAN CAO SING N N 14 
UBL CAO CAP SING N N 15 
UBL CAP CAQ SING N N 16 
UBL CAQ CAR SING N N 17 
UBL CAR CAS SING N N 18 
UBL CAS CAT DOUB N Z 19 
UBL CAT CAU SING N N 20 
UBL CAU CAV SING N N 21 
UBL CAV CAW SING N N 22 
UBL CAW CAX SING N N 23 
UBL CAX CAY SING N N 24 
UBL CAY CAZ SING N N 25 
UBL CAZ CBA SING N N 26 
UBL CBA CBB SING N N 27 
UBL OAA H1  SING N N 28 
UBL CAG H3  SING N N 29 
UBL CAG H4  SING N N 30 
UBL CAH H5  SING N N 31 
UBL CAI H6  SING N N 32 
UBL CAI H7  SING N N 33 
UBL CAL H8  SING N N 34 
UBL CAL H9  SING N N 35 
UBL CAM H10 SING N N 36 
UBL CAM H11 SING N N 37 
UBL CAN H12 SING N N 38 
UBL CAN H13 SING N N 39 
UBL CAO H14 SING N N 40 
UBL CAO H15 SING N N 41 
UBL CAP H16 SING N N 42 
UBL CAP H17 SING N N 43 
UBL CAQ H18 SING N N 44 
UBL CAQ H19 SING N N 45 
UBL CAR H20 SING N N 46 
UBL CAR H21 SING N N 47 
UBL CAS H22 SING N N 48 
UBL CAT H24 SING N N 49 
UBL CAU H26 SING N N 50 
UBL CAU H27 SING N N 51 
UBL CAV H28 SING N N 52 
UBL CAV H29 SING N N 53 
UBL CAW H30 SING N N 54 
UBL CAW H31 SING N N 55 
UBL CAX H32 SING N N 56 
UBL CAX H33 SING N N 57 
UBL CAY H34 SING N N 58 
UBL CAY H35 SING N N 59 
UBL CAZ H36 SING N N 60 
UBL CAZ H37 SING N N 61 
UBL CBA H38 SING N N 62 
UBL CBA H39 SING N N 63 
UBL CBB H40 SING N N 64 
UBL CBB H41 SING N N 65 
UBL CBB H42 SING N N 66 
UBL OBC H43 SING N N 67 
UBL PAC O1  SING N N 68 
UBL O1  H2  SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UBL InChI            InChI                1.06  "InChI=1S/C21H41O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(23)27-18-20(22)19-28-29(24,25)26/h9-10,20,22H,2-8,11-19H2,1H3,(H2,24,25,26)/b10-9-/t20-/m1/s1" 
UBL InChIKey         InChI                1.06  WRGQSWVCFNIUNZ-GDCKJWNLSA-N                                                                                                                                      
UBL SMILES_CANONICAL CACTVS               3.385 "CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@@H](O)CO[P](O)(O)=O"                                                                                                              
UBL SMILES           CACTVS               3.385 "CCCCCCCCC=CCCCCCCCC(=O)OC[CH](O)CO[P](O)(O)=O"                                                                                                                  
UBL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCC/C=C\CCCCCCCC(=O)OC[C@H](COP(=O)(O)O)O"                                                                                                                 
UBL SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCCCC=CCCCCCCCC(=O)OCC(COP(=O)(O)O)O"                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           UBL 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R})-2-oxidanyl-3-phosphonooxy-propyl] (~{Z})-octadec-9-enoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UBL "Create component" 2023-05-25 PDBJ 
UBL "Initial release"  2023-11-01 RCSB 
# 
