data_SJL
# 
_chem_comp.id                                    SJL 
_chem_comp.name                                  "8-(4-azanylbutyl)-6-[2,5-bis(fluoranyl)-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H24 F2 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-15 
_chem_comp.pdbx_modified_date                    2023-05-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        450.484 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SJL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BZI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SJL C9  C1  C 0 1 Y N N -30.219 -5.691 11.580 -3.823 0.116  0.228  C9  SJL 1  
SJL C3  C2  C 0 1 Y N N -32.905 -4.277 17.415 2.370  1.911  -0.220 C3  SJL 2  
SJL C4  C3  C 0 1 N N N -32.268 -4.823 16.254 0.963  1.783  -0.213 C4  SJL 3  
SJL N5  N1  N 0 1 Y N N -33.882 -2.309 18.416 4.503  0.985  0.171  N5  SJL 4  
SJL N1  N2  N 0 1 Y N N -33.731 -4.353 19.671 4.308  3.167  -0.608 N1  SJL 5  
SJL C2  C4  C 0 1 Y N N -33.163 -4.944 18.616 2.990  3.105  -0.621 C2  SJL 6  
SJL C19 C5  C 0 1 N N N -33.554 -0.787 16.153 3.477  -1.466 0.995  C19 SJL 7  
SJL C20 C6  C 0 1 N N N -32.501 0.179  16.663 3.817  -2.326 -0.224 C20 SJL 8  
SJL C21 C7  C 0 1 N N N -31.300 0.258  15.728 4.715  -3.487 0.206  C21 SJL 9  
SJL C22 C8  C 0 1 N N N -30.141 1.021  16.324 5.055  -4.347 -1.013 C22 SJL 10 
SJL C23 C9  C 0 1 Y N N -33.311 -2.928 17.377 3.184  0.831  0.184  C23 SJL 11 
SJL C7  C10 C 0 1 Y N N -30.054 -4.923 13.886 -1.760 0.263  -0.998 C7  SJL 12 
SJL C12 C11 C 0 1 Y N N -28.523 -7.845 8.999  -7.345 -0.296 1.455  C12 SJL 13 
SJL C13 C12 C 0 1 Y N N -28.641 -7.013 7.904  -8.004 -0.336 0.234  C13 SJL 14 
SJL C18 C13 C 0 1 N N N -32.542 -2.712 15.073 1.279  -0.505 0.596  C18 SJL 15 
SJL C17 C14 C 0 1 Y N N -32.148 -4.937 12.787 -1.759 0.440  1.414  C17 SJL 16 
SJL C14 C15 C 0 1 Y N N -29.264 -5.778 8.056  -7.274 -0.227 -0.935 C14 SJL 17 
SJL C15 C16 C 0 1 N N N -29.442 -4.845 6.897  -7.985 -0.270 -2.263 C15 SJL 18 
SJL C16 C17 C 0 1 Y N N -31.589 -5.437 11.638 -3.129 0.283  1.427  C16 SJL 19 
SJL N   N3  N 0 1 N N N -34.603 -2.450 20.576 6.417  2.253  -0.215 N   SJL 20 
SJL C   C18 C 0 1 N N N -35.029 -1.067 20.561 7.042  3.509  -0.638 C   SJL 21 
SJL O   O1  O 0 1 N N N -32.478 -2.016 14.070 0.792  -1.563 0.953  O   SJL 22 
SJL C1  C19 C 0 1 Y N N -34.056 -3.059 19.518 5.042  2.131  -0.215 C1  SJL 23 
SJL C10 C20 C 0 1 Y N N -29.634 -6.190 10.307 -5.296 -0.046 0.242  C10 SJL 24 
SJL C11 C21 C 0 1 Y N N -29.026 -7.435 10.220 -5.970 -0.145 1.458  C11 SJL 25 
SJL C5  C22 C 0 1 N N N -32.064 -4.093 15.136 0.405  0.598  0.187  C5  SJL 26 
SJL C6  C23 C 0 1 Y N N -31.420 -4.662 13.925 -1.066 0.430  0.201  C6  SJL 27 
SJL C8  C24 C 0 1 Y N N -29.492 -5.428 12.737 -3.130 0.106  -0.985 C8  SJL 28 
SJL F   F1  F 0 1 N N N -28.163 -5.692 12.748 -3.803 -0.056 -2.145 F   SJL 29 
SJL F1  F2  F 0 1 N N N -33.480 -4.707 12.809 -1.087 0.602  2.575  F1  SJL 30 
SJL N2  N4  N 0 1 Y N N -29.753 -5.366 9.243  -5.964 -0.084 -0.904 N2  SJL 31 
SJL N3  N5  N 0 1 N N N -33.120 -2.190 16.218 2.617  -0.353 0.583  N3  SJL 32 
SJL N4  N6  N 0 1 N N N -29.023 1.144  15.369 5.917  -5.463 -0.601 N4  SJL 33 
SJL H1  H1  H 0 1 N N N -31.940 -5.852 16.273 0.336  2.608  -0.518 H1  SJL 34 
SJL H2  H2  H 0 1 N N N -32.890 -5.986 18.695 2.401  3.954  -0.934 H2  SJL 35 
SJL H3  H3  H 0 1 N N N -33.782 -0.538 15.106 2.955  -2.074 1.734  H3  SJL 36 
SJL H4  H4  H 0 1 N N N -34.462 -0.671 16.763 4.395  -1.073 1.431  H4  SJL 37 
SJL H5  H5  H 0 1 N N N -32.159 -0.158 17.653 2.898  -2.718 -0.660 H5  SJL 38 
SJL H6  H6  H 0 1 N N N -32.949 1.180  16.751 4.339  -1.717 -0.963 H6  SJL 39 
SJL H7  H7  H 0 1 N N N -31.610 0.760  14.800 5.633  -3.095 0.641  H7  SJL 40 
SJL H8  H8  H 0 1 N N N -30.966 -0.765 15.498 4.193  -4.095 0.945  H8  SJL 41 
SJL H9  H9  H 0 1 N N N -29.788 0.491  17.221 4.136  -4.740 -1.449 H9  SJL 42 
SJL H10 H10 H 0 1 N N N -30.483 2.028  16.605 5.577  -3.739 -1.753 H10 SJL 43 
SJL H11 H11 H 0 1 N N N -29.439 -4.730 14.753 -1.224 0.255  -1.936 H11 SJL 44 
SJL H12 H12 H 0 1 N N N -28.042 -8.807 8.903  -7.894 -0.375 2.381  H12 SJL 45 
SJL H13 H13 H 0 1 N N N -28.255 -7.316 6.942  -9.077 -0.454 0.197  H13 SJL 46 
SJL H14 H14 H 0 1 N N N -29.968 -3.939 7.232  -8.269 0.741  -2.557 H14 SJL 47 
SJL H15 H15 H 0 1 N N N -28.456 -4.569 6.494  -7.323 -0.695 -3.017 H15 SJL 48 
SJL H16 H16 H 0 1 N N N -30.032 -5.342 6.113  -8.880 -0.887 -2.176 H16 SJL 49 
SJL H17 H17 H 0 1 N N N -32.211 -5.634 10.777 -3.665 0.291  2.364  H17 SJL 50 
SJL H18 H18 H 0 1 N N N -35.414 -2.985 20.812 6.970  1.506  0.064  H18 SJL 51 
SJL H19 H19 H 0 1 N N N -35.444 -0.800 21.544 8.126  3.416  -0.572 H19 SJL 52 
SJL H20 H20 H 0 1 N N N -34.167 -0.420 20.339 6.758  3.727  -1.667 H20 SJL 53 
SJL H21 H21 H 0 1 N N N -35.799 -0.929 19.788 6.706  4.318  0.011  H21 SJL 54 
SJL H22 H22 H 0 1 N N N -28.947 -8.071 11.089 -5.426 -0.104 2.391  H22 SJL 55 
SJL H23 H23 H 0 1 N N N -28.275 1.653  15.795 5.482  -6.004 0.131  H23 SJL 56 
SJL H24 H24 H 0 1 N N N -28.702 0.232  15.112 6.156  -6.046 -1.389 H24 SJL 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SJL C15 C14 SING N N 1  
SJL C13 C14 DOUB Y N 2  
SJL C13 C12 SING Y N 3  
SJL C14 N2  SING Y N 4  
SJL C12 C11 DOUB Y N 5  
SJL N2  C10 DOUB Y N 6  
SJL C11 C10 SING Y N 7  
SJL C10 C9  SING N N 8  
SJL C9  C16 DOUB Y N 9  
SJL C9  C8  SING Y N 10 
SJL C16 C17 SING Y N 11 
SJL C8  F   SING N N 12 
SJL C8  C7  DOUB Y N 13 
SJL C17 F1  SING N N 14 
SJL C17 C6  DOUB Y N 15 
SJL C7  C6  SING Y N 16 
SJL C6  C5  SING N N 17 
SJL O   C18 DOUB N N 18 
SJL C18 C5  SING N N 19 
SJL C18 N3  SING N N 20 
SJL C5  C4  DOUB N N 21 
SJL N4  C22 SING N N 22 
SJL C21 C22 SING N N 23 
SJL C21 C20 SING N N 24 
SJL C19 N3  SING N N 25 
SJL C19 C20 SING N N 26 
SJL N3  C23 SING N N 27 
SJL C4  C3  SING N N 28 
SJL C23 C3  DOUB Y N 29 
SJL C23 N5  SING Y N 30 
SJL C3  C2  SING Y N 31 
SJL N5  C1  DOUB Y N 32 
SJL C2  N1  DOUB Y N 33 
SJL C1  N1  SING Y N 34 
SJL C1  N   SING N N 35 
SJL C   N   SING N N 36 
SJL C4  H1  SING N N 37 
SJL C2  H2  SING N N 38 
SJL C19 H3  SING N N 39 
SJL C19 H4  SING N N 40 
SJL C20 H5  SING N N 41 
SJL C20 H6  SING N N 42 
SJL C21 H7  SING N N 43 
SJL C21 H8  SING N N 44 
SJL C22 H9  SING N N 45 
SJL C22 H10 SING N N 46 
SJL C7  H11 SING N N 47 
SJL C12 H12 SING N N 48 
SJL C13 H13 SING N N 49 
SJL C15 H14 SING N N 50 
SJL C15 H15 SING N N 51 
SJL C15 H16 SING N N 52 
SJL C16 H17 SING N N 53 
SJL N   H18 SING N N 54 
SJL C   H19 SING N N 55 
SJL C   H20 SING N N 56 
SJL C   H21 SING N N 57 
SJL C11 H22 SING N N 58 
SJL N4  H23 SING N N 59 
SJL N4  H24 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SJL InChI            InChI                1.06  "InChI=1S/C24H24F2N6O/c1-14-6-5-7-21(30-14)18-12-19(25)16(11-20(18)26)17-10-15-13-29-24(28-2)31-22(15)32(23(17)33)9-4-3-8-27/h5-7,10-13H,3-4,8-9,27H2,1-2H3,(H,28,29,31)" 
SJL InChIKey         InChI                1.06  NELFAFAXIZFQJB-UHFFFAOYSA-N                                                                                                                                               
SJL SMILES_CANONICAL CACTVS               3.385 "CNc1ncc2C=C(C(=O)N(CCCCN)c2n1)c3cc(F)c(cc3F)c4cccc(C)n4"                                                                                                                 
SJL SMILES           CACTVS               3.385 "CNc1ncc2C=C(C(=O)N(CCCCN)c2n1)c3cc(F)c(cc3F)c4cccc(C)n4"                                                                                                                 
SJL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)c2cc(c(cc2F)C3=Cc4cnc(nc4N(C3=O)CCCCN)NC)F"                                                                                                                   
SJL SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)c2cc(c(cc2F)C3=Cc4cnc(nc4N(C3=O)CCCCN)NC)F"                                                                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           SJL 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "8-(4-azanylbutyl)-6-[2,5-bis(fluoranyl)-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SJL "Create component" 2022-12-15 PDBE 
SJL "Initial release"  2023-01-18 RCSB 
SJL "Modify formula"   2023-05-15 PDBE 
# 
