data_JKL
# 
_chem_comp.id                                    JKL 
_chem_comp.name                                  "(3R)-N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-3-hydroxybutanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H37 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-07 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        451.601 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JKL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8TPG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JKL C13 C1  C 0 1 N N N N N N 8.565  4.499  23.034 4.933  2.010  -0.566 C13 JKL 1  
JKL C15 C2  C 0 1 N N N N N N 10.887 5.098  23.942 7.045  0.783  -1.090 C15 JKL 2  
JKL C17 C3  C 0 1 N N N N N N 10.217 2.632  23.789 5.098  -0.442 -0.117 C17 JKL 3  
JKL C20 C4  C 0 1 Y N N N N N 4.831  1.688  18.580 -0.268 3.560  2.184  C20 JKL 4  
JKL C21 C5  C 0 1 Y N N N N N 5.599  1.388  17.461 -0.790 4.005  0.984  C21 JKL 5  
JKL C24 C6  C 0 1 Y N N N N N 8.893  -1.326 21.885 -1.489 -0.393 0.302  C24 JKL 6  
JKL C26 C7  C 0 1 Y N N N N N 11.298 -1.572 22.010 -3.075 -0.074 -1.468 C26 JKL 7  
JKL C28 C8  C 0 1 Y N N N N N 10.012 -1.472 24.032 -3.595 0.663  0.753  C28 JKL 8  
JKL C01 C9  C 0 1 N N N N N N 6.975  -4.135 22.591 -1.677 -5.573 0.180  C01 JKL 9  
JKL C02 C10 C 0 1 N N R N N N 7.819  -4.470 21.374 -0.580 -4.589 0.592  C02 JKL 10 
JKL C04 C11 C 0 1 N N N N N N 7.363  -3.614 20.204 -1.036 -3.160 0.292  C04 JKL 11 
JKL C05 C12 C 0 1 N N N N N N 6.865  -2.194 20.469 -0.010 -2.186 0.809  C05 JKL 12 
JKL C08 C13 C 0 1 N N R N N N 7.054  0.192  21.279 0.792  0.090  1.148  C08 JKL 13 
JKL C09 C14 C 0 1 N N N N N N 8.165  1.232  21.504 1.955  -0.007 0.194  C09 JKL 14 
JKL C12 C15 C 0 1 N N N N N N 9.207  3.132  22.749 4.165  0.686  -0.561 C12 JKL 15 
JKL C14 C16 C 0 1 N N N N N N 9.514  5.606  23.496 6.113  1.912  -1.535 C14 JKL 16 
JKL C16 C17 C 0 1 N N N N N N 10.791 3.749  24.657 6.278  -0.540 -1.086 C16 JKL 17 
JKL C18 C18 C 0 1 Y N N N N N 6.489  0.643  19.927 0.233  1.489  1.118  C18 JKL 18 
JKL C19 C19 C 0 1 Y N N N N N 5.271  1.315  19.841 0.258  2.280  2.258  C19 JKL 19 
JKL C23 C20 C 0 1 Y N N N N N 7.193  0.386  18.745 -0.301 2.004  -0.047 C23 JKL 20 
JKL C25 C21 C 0 1 Y N N N N N 10.133 -1.436 21.251 -1.847 -0.532 -1.032 C25 JKL 21 
JKL C27 C22 C 0 1 Y N N N N N 11.242 -1.597 23.400 -3.948 0.522  -0.576 C27 JKL 22 
JKL C29 C23 C 0 1 Y N N N N N 8.853  -1.335 23.281 -2.368 0.207  1.195  C29 JKL 23 
JKL C30 C24 C 0 1 N N N N N N 12.522 -1.743 24.248 -5.287 1.021  -1.055 C30 JKL 24 
JKL C31 C25 C 0 1 N N N N N N 13.725 -2.024 23.349 -6.053 1.633  0.119  C31 JKL 25 
JKL C32 C26 C 0 1 N N N N N N 12.388 -2.895 25.246 -5.079 2.083  -2.137 C32 JKL 26 
JKL C33 C27 C 0 1 N N N N N N 12.764 -0.447 25.027 -6.089 -0.146 -1.634 C33 JKL 27 
JKL N07 N1  N 0 1 N N N N N N 7.612  -1.146 21.185 -0.248 -0.860 0.748  N07 JKL 28 
JKL N11 N2  N 0 1 N N N N N N 8.121  2.163  22.623 3.035  0.780  0.366  N11 JKL 29 
JKL N22 N3  N 0 1 Y N N N N N 6.751  0.746  17.556 -0.793 3.228  -0.081 N22 JKL 30 
JKL O03 O1  O 0 1 N N N N N N 7.579  -5.810 21.002 0.614  -4.872 -0.141 O03 JKL 31 
JKL O06 O2  O 0 1 N N N N N N 5.844  -1.976 19.933 1.030  -2.594 1.280  O06 JKL 32 
JKL O10 O3  O 0 1 N N N N N N 9.092  1.311  20.750 1.918  -0.792 -0.730 O10 JKL 33 
JKL H1  H1  H 0 1 N N N N N N 8.076  4.840  22.109 4.268  2.814  -0.883 H1  JKL 34 
JKL H2  H2  H 0 1 N N N N N N 7.807  4.357  23.819 5.303  2.219  0.438  H2  JKL 35 
JKL H3  H3  H 0 1 N N N N N N 11.530 4.986  23.056 7.886  0.713  -1.781 H3  JKL 36 
JKL H4  H4  H 0 1 N N N N N N 11.333 5.833  24.628 7.416  0.992  -0.086 H4  JKL 37 
JKL H5  H5  H 0 1 N N N N N N 9.714  1.905  24.443 5.468  -0.234 0.887  H5  JKL 38 
JKL H6  H6  H 0 1 N N N N N N 11.046 2.138  23.261 4.551  -1.385 -0.113 H6  JKL 39 
JKL H7  H7  H 0 1 N N N N N N 3.893  2.211  18.467 -0.265 4.203  3.051  H7  JKL 40 
JKL H8  H8  H 0 1 N N N N N N 5.245  1.688  16.486 -1.202 5.002  0.919  H8  JKL 41 
JKL H9  H9  H 0 1 N N N N N N 12.253 -1.659 21.512 -3.354 -0.182 -2.506 H9  JKL 42 
JKL H10 H10 H 0 1 N N N N N N 9.957  -1.481 25.111 -4.279 1.130  1.446  H10 JKL 43 
JKL H11 H11 H 0 1 N N N N N N 7.299  -4.751 23.443 -1.874 -5.471 -0.887 H11 JKL 44 
JKL H12 H12 H 0 1 N N N N N N 7.098  -3.071 22.840 -1.351 -6.591 0.394  H12 JKL 45 
JKL H13 H13 H 0 1 N N N N N N 5.917  -4.341 22.371 -2.587 -5.357 0.740  H13 JKL 46 
JKL H14 H14 H 0 1 N N N N N N 8.883  -4.288 21.587 -0.382 -4.691 1.660  H14 JKL 47 
JKL H15 H15 H 0 1 N N N N N N 6.543  -4.155 19.710 -1.148 -3.033 -0.785 H15 JKL 48 
JKL H16 H16 H 0 1 N N N N N N 8.216  -3.532 19.514 -1.993 -2.974 0.781  H16 JKL 49 
JKL H17 H17 H 0 1 N N N N N N 6.288  0.265  22.066 1.130  -0.145 2.157  H17 JKL 50 
JKL H18 H18 H 0 1 N N N N N N 9.728  3.203  21.783 3.795  0.477  -1.565 H18 JKL 51 
JKL H19 H19 H 0 1 N N N N N N 9.659  6.309  22.662 5.742  1.703  -2.539 H19 JKL 52 
JKL H20 H20 H 0 1 N N N N N N 9.047  6.132  24.342 6.659  2.855  -1.538 H20 JKL 53 
JKL H21 H21 H 0 1 N N N N N N 10.145 3.869  25.539 5.908  -0.749 -2.089 H21 JKL 54 
JKL H22 H22 H 0 1 N N N N N N 11.801 3.454  24.979 6.942  -1.344 -0.769 H22 JKL 55 
JKL H23 H23 H 0 1 N N N N N N 4.691  1.537  20.724 0.678  1.906  3.180  H23 JKL 56 
JKL H24 H24 H 0 1 N N N N N N 8.140  -0.130 18.810 -0.317 1.398  -0.941 H24 JKL 57 
JKL H25 H25 H 0 1 N N N N N N 10.191 -1.416 20.173 -1.166 -0.997 -1.729 H25 JKL 58 
JKL H26 H26 H 0 1 N N N N N N 7.903  -1.234 23.785 -2.093 0.317  2.234  H26 JKL 59 
JKL H27 H27 H 0 1 N N N N N N 14.629 -2.126 23.967 -5.482 2.465  0.532  H27 JKL 60 
JKL H28 H28 H 0 1 N N N N N N 13.556 -2.957 22.791 -7.022 1.994  -0.227 H28 JKL 61 
JKL H29 H29 H 0 1 N N N N N N 13.856 -1.192 22.641 -6.202 0.877  0.890  H29 JKL 62 
JKL H30 H30 H 0 1 N N N N N N 11.526 -2.712 25.904 -4.533 1.647  -2.974 H30 JKL 63 
JKL H31 H31 H 0 1 N N N N N N 12.238 -3.838 24.700 -6.047 2.444  -2.483 H31 JKL 64 
JKL H32 H32 H 0 1 N N N N N N 13.304 -2.964 25.852 -4.508 2.915  -1.724 H32 JKL 65 
JKL H33 H33 H 0 1 N N N N N N 11.900 -0.242 25.676 -6.238 -0.902 -0.864 H33 JKL 66 
JKL H34 H34 H 0 1 N N N N N N 13.668 -0.554 25.644 -7.058 0.215  -1.981 H34 JKL 67 
JKL H35 H35 H 0 1 N N N N N N 12.898 0.386  24.321 -5.543 -0.582 -2.471 H35 JKL 68 
JKL H36 H36 H 0 1 N N N N N N 7.371  2.140  23.284 3.065  1.408  1.105  H36 JKL 69 
JKL H37 H37 H 0 1 N N N N N N 7.850  -6.388 21.706 0.512  -4.800 -1.100 H37 JKL 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JKL C21 N22 DOUB Y N 1  
JKL C21 C20 SING Y N 2  
JKL N22 C23 SING Y N 3  
JKL C20 C19 DOUB Y N 4  
JKL C23 C18 DOUB Y N 5  
JKL C19 C18 SING Y N 6  
JKL C18 C08 SING N N 7  
JKL O06 C05 DOUB N N 8  
JKL C04 C05 SING N N 9  
JKL C04 C02 SING N N 10 
JKL C05 N07 SING N N 11 
JKL O10 C09 DOUB N N 12 
JKL O03 C02 SING N N 13 
JKL N07 C08 SING N N 14 
JKL N07 C24 SING N N 15 
JKL C25 C24 DOUB Y N 16 
JKL C25 C26 SING Y N 17 
JKL C08 C09 SING N N 18 
JKL C02 C01 SING N N 19 
JKL C09 N11 SING N N 20 
JKL C24 C29 SING Y N 21 
JKL C26 C27 DOUB Y N 22 
JKL N11 C12 SING N N 23 
JKL C12 C13 SING N N 24 
JKL C12 C17 SING N N 25 
JKL C13 C14 SING N N 26 
JKL C29 C28 DOUB Y N 27 
JKL C31 C30 SING N N 28 
JKL C27 C28 SING Y N 29 
JKL C27 C30 SING N N 30 
JKL C14 C15 SING N N 31 
JKL C17 C16 SING N N 32 
JKL C15 C16 SING N N 33 
JKL C30 C33 SING N N 34 
JKL C30 C32 SING N N 35 
JKL C13 H1  SING N N 36 
JKL C13 H2  SING N N 37 
JKL C15 H3  SING N N 38 
JKL C15 H4  SING N N 39 
JKL C17 H5  SING N N 40 
JKL C17 H6  SING N N 41 
JKL C20 H7  SING N N 42 
JKL C21 H8  SING N N 43 
JKL C26 H9  SING N N 44 
JKL C28 H10 SING N N 45 
JKL C01 H11 SING N N 46 
JKL C01 H12 SING N N 47 
JKL C01 H13 SING N N 48 
JKL C02 H14 SING N N 49 
JKL C04 H15 SING N N 50 
JKL C04 H16 SING N N 51 
JKL C08 H17 SING N N 52 
JKL C12 H18 SING N N 53 
JKL C14 H19 SING N N 54 
JKL C14 H20 SING N N 55 
JKL C16 H21 SING N N 56 
JKL C16 H22 SING N N 57 
JKL C19 H23 SING N N 58 
JKL C23 H24 SING N N 59 
JKL C25 H25 SING N N 60 
JKL C29 H26 SING N N 61 
JKL C31 H27 SING N N 62 
JKL C31 H28 SING N N 63 
JKL C31 H29 SING N N 64 
JKL C32 H30 SING N N 65 
JKL C32 H31 SING N N 66 
JKL C32 H32 SING N N 67 
JKL C33 H33 SING N N 68 
JKL C33 H34 SING N N 69 
JKL C33 H35 SING N N 70 
JKL N11 H36 SING N N 71 
JKL O03 H37 SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JKL SMILES           ACDLabs              12.01 "CC(C)(C)c1ccc(cc1)N(C(=O)CC(C)O)C(c1cccnc1)C(=O)NC1CCCCC1"                                                                                                                                        
JKL InChI            InChI                1.06  "InChI=1S/C27H37N3O3/c1-19(31)17-24(32)30(23-14-12-21(13-15-23)27(2,3)4)25(20-9-8-16-28-18-20)26(33)29-22-10-6-5-7-11-22/h8-9,12-16,18-19,22,25,31H,5-7,10-11,17H2,1-4H3,(H,29,33)/t19-,25-/m1/s1" 
JKL InChIKey         InChI                1.06  FQCVOMNESMUUJL-KBMIEXCESA-N                                                                                                                                                                        
JKL SMILES_CANONICAL CACTVS               3.385 "C[C@@H](O)CC(=O)N([C@@H](C(=O)NC1CCCCC1)c2cccnc2)c3ccc(cc3)C(C)(C)C"                                                                                                                              
JKL SMILES           CACTVS               3.385 "C[CH](O)CC(=O)N([CH](C(=O)NC1CCCCC1)c2cccnc2)c3ccc(cc3)C(C)(C)C"                                                                                                                                  
JKL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CC(=O)N(c1ccc(cc1)C(C)(C)C)[C@H](c2cccnc2)C(=O)NC3CCCCC3)O"                                                                                                                                
JKL SMILES           "OpenEye OEToolkits" 2.0.7 "CC(CC(=O)N(c1ccc(cc1)C(C)(C)C)C(c2cccnc2)C(=O)NC3CCCCC3)O"                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JKL "SYSTEMATIC NAME" ACDLabs              12.01 "(3R)-N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-3-hydroxybutanamide"                           
JKL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-~{N}-(4-~{tert}-butylphenyl)-~{N}-[(1~{R})-2-(cyclohexylamino)-2-oxidanylidene-1-pyridin-3-yl-ethyl]-3-oxidanyl-butanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JKL "Create component" 2023-08-07 RCSB 
JKL "Initial release"  2024-01-24 RCSB 
JKL "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            JKL 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C04 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
