data_JJL
# 
_chem_comp.id                                    JJL 
_chem_comp.name                                  "S-[(S)-hydroxy(5-methoxypyridin-3-yl)methyl]-L-cysteine" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C10 H14 N2 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               CYS 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-08-06 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        258.294 
_chem_comp.one_letter_code                       C 
_chem_comp.three_letter_code                     JJL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3O92 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JJL C    C    C 0 1 N N N N N N 2.754 35.011 17.744 4.883  0.546  -0.128 C    JJL 1  
JJL N    N    N 0 1 N N N N N N 3.795 35.236 15.560 3.642  -1.260 -1.178 N    JJL 2  
JJL O    O    O 0 1 N N N N N N 2.986 34.419 18.787 5.654  -0.297 0.264  O    JJL 3  
JJL N1   N1   N 0 1 Y N N N N N 8.383 40.052 14.059 -3.303 -1.713 -0.410 N1   JJL 4  
JJL C2   C2   C 0 1 Y N N N N N 7.299 39.738 14.791 -2.078 -1.481 0.022  C2   JJL 5  
JJL C3   C3   C 0 1 Y N N N N N 6.216 39.070 14.211 -1.703 -0.220 0.446  C3   JJL 6  
JJL C4   C4   C 0 1 Y N N N N N 6.278 38.741 12.853 -2.631 0.808  0.415  C4   JJL 7  
JJL C5   C5   C 0 1 Y N N N N N 7.416 39.078 12.117 -3.913 0.528  -0.046 C5   JJL 8  
JJL C6   C6   C 0 1 Y N N N N N 8.463 39.741 12.753 -4.215 -0.763 -0.455 C6   JJL 9  
JJL C7   C7   C 0 1 N N S N N N 5.018 38.734 15.033 -0.301 0.033  0.938  C7   JJL 10 
JJL O7   O7   O 0 1 N N N N N N 4.055 38.013 14.252 0.006  -0.881 1.993  O7   JJL 11 
JJL CA   CA   C 0 1 N N R N N N 3.917 35.593 16.967 3.566  0.139  -0.737 CA   JJL 12 
JJL CB   CB   C 0 1 N N N N N N 3.962 37.110 17.136 2.456  0.285  0.306  CB   JJL 13 
JJL SG   SG   S 0 1 N N N N N N 5.456 37.763 16.448 0.870  -0.205 -0.427 SG   JJL 14 
JJL O15  O15  O 0 1 N N N N N N 7.529 38.765 10.782 -4.857 1.505  -0.095 O15  JJL 15 
JJL C16  C16  C 0 1 N N N N N N 6.524 39.145 9.841  -6.148 1.135  -0.581 C16  JJL 16 
JJL OXT  O4   O 0 1 N Y N N N N 1.413 35.151 17.266 5.198  1.847  -0.016 O4   JJL 17 
JJL HN   HN   H 0 1 N N N N N N 4.564 35.621 15.050 3.844  -1.873 -0.403 HN   JJL 18 
JJL HNA  HNA  H 0 1 N N N N N N 3.799 34.240 15.467 2.794  -1.538 -1.648 HNA  JJL 19 
JJL H2   H2   H 0 1 N Y N N N N 7.265 40.004 15.837 -1.359 -2.286 0.044  H2   JJL 20 
JJL H4   H4   H 0 1 N N N N N N 5.453 38.231 12.378 -2.365 1.803  0.741  H4   JJL 21 
JJL H6   H6   H 0 1 N N N N N N 9.347 40.008 12.192 -5.207 -0.991 -0.815 H6   JJL 22 
JJL H7   H7   H 0 1 N N N N N N 4.582 39.684 15.375 -0.225 1.055  1.308  H7   JJL 23 
JJL HO7  HO7  H 0 1 N N N N N N 3.300 37.808 14.790 -0.042 -1.811 1.734  HO7  JJL 24 
JJL HA   HA   H 0 1 N N N N N N 4.857 35.177 17.358 3.348  0.779  -1.592 HA   JJL 25 
JJL HB   HB   H 0 1 N N N N N N 3.100 37.557 16.618 2.674  -0.354 1.161  HB   JJL 26 
JJL HBA  HBA  H 0 1 N N N N N N 3.920 37.355 18.207 2.399  1.323  0.633  HBA  JJL 27 
JJL H16  H16  H 0 1 N N N N N N 6.811 38.798 8.837  -6.060 0.762  -1.601 H16  JJL 28 
JJL H16A H16A H 0 0 N N N N N N 5.564 38.690 10.126 -6.567 0.356  0.056  H16A JJL 29 
JJL H16B H16B H 0 0 N N N N N N 6.423 40.240 9.835  -6.804 2.006  -0.568 H16B JJL 30 
JJL HXT  H14  H 0 1 N Y N N N N 0.815 34.729 17.872 6.052  2.059  0.384  H14  JJL 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JJL C   O    DOUB N N 1  
JJL C   OXT  SING N N 2  
JJL N   CA   SING N N 3  
JJL N   HN   SING N N 4  
JJL N   HNA  SING N N 5  
JJL N1  C2   SING Y N 6  
JJL C2  H2   SING N N 7  
JJL C3  C2   DOUB Y N 8  
JJL C3  C7   SING N N 9  
JJL C4  C3   SING Y N 10 
JJL C4  H4   SING N N 11 
JJL C5  C4   DOUB Y N 12 
JJL C5  C6   SING Y N 13 
JJL C6  N1   DOUB Y N 14 
JJL C6  H6   SING N N 15 
JJL C7  SG   SING N N 16 
JJL C7  H7   SING N N 17 
JJL O7  C7   SING N N 18 
JJL O7  HO7  SING N N 19 
JJL CA  C    SING N N 20 
JJL CA  CB   SING N N 21 
JJL CA  HA   SING N N 22 
JJL CB  HB   SING N N 23 
JJL CB  HBA  SING N N 24 
JJL SG  CB   SING N N 25 
JJL O15 C5   SING N N 26 
JJL C16 O15  SING N N 27 
JJL C16 H16  SING N N 28 
JJL C16 H16A SING N N 29 
JJL C16 H16B SING N N 30 
JJL OXT HXT  SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JJL SMILES           ACDLabs              12.01 "O=C(O)C(N)CSC(O)c1cncc(OC)c1"                                                                                       
JJL SMILES_CANONICAL CACTVS               3.370 "COc1cncc(c1)[C@@H](O)SC[C@H](N)C(O)=O"                                                                              
JJL SMILES           CACTVS               3.370 "COc1cncc(c1)[CH](O)SC[CH](N)C(O)=O"                                                                                 
JJL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "COc1cc(cnc1)[C@@H](O)SC[C@@H](C(=O)O)N"                                                                             
JJL SMILES           "OpenEye OEToolkits" 1.7.0 "COc1cc(cnc1)C(O)SCC(C(=O)O)N"                                                                                       
JJL InChI            InChI                1.03  "InChI=1S/C10H14N2O4S/c1-16-7-2-6(3-12-4-7)10(15)17-5-8(11)9(13)14/h2-4,8,10,15H,5,11H2,1H3,(H,13,14)/t8-,10-/m0/s1" 
JJL InChIKey         InChI                1.03  ZARNOYAJRQCTEJ-WPRPVWTQSA-N                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JJL "SYSTEMATIC NAME" ACDLabs              12.01 "S-[(S)-hydroxy(5-methoxypyridin-3-yl)methyl]-L-cysteine"                            
JJL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-2-azanyl-3-[(S)-hydroxy-(5-methoxypyridin-3-yl)methyl]sulfanyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JJL "Create component"  2010-08-06 RCSB 
JJL "Modify descriptor" 2011-06-04 RCSB 
JJL "Modify PCM"        2024-09-27 PDBE 
# 
