data_GXL
#

_chem_comp.id                                   GXL
_chem_comp.name                                 alpha-L-galactopyranose
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "alpha-L-galactose; L-galactose; galactose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2005-04-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       180.156
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GXL
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2BP6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  GXL  alpha-L-galactose  PDB  ?  
2  GXL  L-galactose        PDB  ?  
3  GXL  galactose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GXL  C1   C1    C  0  1  N  N  R  28.877  17.820  59.720   1.424   0.489  -0.382  C1   GXL   1  
GXL  C2   C2    C  0  1  N  N  S  27.993  18.731  58.865   0.392   0.498  -1.512  C2   GXL   2  
GXL  C3   C3    C  0  1  N  N  R  27.753  20.035  59.589  -0.651  -0.592  -1.244  C3   GXL   3  
GXL  C4   C4    C  0  1  N  N  S  29.081  20.672  59.941  -1.222  -0.387   0.163  C4   GXL   4  
GXL  C5   C5    C  0  1  N  N  S  29.933  19.689  60.739  -0.067  -0.330   1.166  C5   GXL   5  
GXL  C6   C6    C  0  1  N  N  N  31.329  20.240  60.995  -0.629  -0.161   2.579  C6   GXL   6  
GXL  O1   O1    O  0  1  N  Y  N  28.175  17.528  60.941   2.043  -0.797  -0.316  O1   GXL   7  
GXL  O2   O2    O  0  1  N  N  N  26.711  18.154  58.567   1.044   0.242  -2.757  O2   GXL   8  
GXL  O3   O3    O  0  1  N  N  N  26.985  20.924  58.731  -1.700  -0.499  -2.209  O3   GXL   9  
GXL  O4   O4    O  0  1  N  N  N  29.702  21.088  58.705  -1.958   0.836   0.206  O4   GXL  10  
GXL  O5   O5    O  0  1  N  N  N  30.095  18.484  59.996   0.783   0.771   0.859  O5   GXL  11  
GXL  O6   O6    O  0  1  N  N  N  31.243  21.317  61.920   0.447  -0.112   3.517  O6   GXL  12  
GXL  H1   H1    H  0  1  N  N  N  29.083  16.872  59.169   2.183   1.246  -0.579  H1   GXL  13  
GXL  H2   HA    H  0  1  N  N  N  28.521  18.945  57.907  -0.098   1.470  -1.550  H2   GXL  14  
GXL  H3   H3    H  0  1  N  N  N  27.179  19.838  60.524  -0.180  -1.573  -1.309  H3   GXL  15  
GXL  H4   H4    H  0  1  N  N  N  28.891  21.574  60.569  -1.881  -1.218   0.414  H4   GXL  16  
GXL  H5   H5    H  0  1  N  N  N  29.435  19.465  61.711   0.504  -1.256   1.112  H5   GXL  17  
GXL  H61  H6C1  H  0  1  N  N  N  31.849  20.531  60.053  -1.278  -1.005   2.815  H61  GXL  18  
GXL  H62  H6C2  H  0  1  N  N  N  32.041  19.450  61.329  -1.202   0.764   2.634  H62  GXL  19  
GXL  HO1  HB    H  0  1  N  Y  N  28.724  16.962  61.472   2.688  -0.760   0.402  HO1  GXL  20  
GXL  HO2  H2    H  0  1  N  Y  N  26.162  18.719  58.036   1.695   0.947  -2.882  HO2  GXL  21  
GXL  HO3  HC    H  0  1  N  Y  N  26.834  21.744  59.186  -1.293  -0.621  -3.078  HO3  GXL  22  
GXL  HO4  HD    H  0  1  N  Y  N  30.535  21.488  58.926  -2.670   0.758  -0.443  HO4  GXL  23  
GXL  HO6  H6    H  0  1  N  Y  N  32.114  21.661  62.080   0.050  -0.005   4.393  HO6  GXL  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GXL  C1  C2   SING  N  N   1  
GXL  C1  O1   SING  N  N   2  
GXL  C1  O5   SING  N  N   3  
GXL  C1  H1   SING  N  N   4  
GXL  C2  C3   SING  N  N   5  
GXL  C2  O2   SING  N  N   6  
GXL  C2  H2   SING  N  N   7  
GXL  C3  C4   SING  N  N   8  
GXL  C3  O3   SING  N  N   9  
GXL  C3  H3   SING  N  N  10  
GXL  C4  C5   SING  N  N  11  
GXL  C4  O4   SING  N  N  12  
GXL  C4  H4   SING  N  N  13  
GXL  C5  C6   SING  N  N  14  
GXL  C5  O5   SING  N  N  15  
GXL  C5  H5   SING  N  N  16  
GXL  C6  O6   SING  N  N  17  
GXL  C6  H61  SING  N  N  18  
GXL  C6  H62  SING  N  N  19  
GXL  O1  HO1  SING  N  N  20  
GXL  O2  HO2  SING  N  N  21  
GXL  O3  HO3  SING  N  N  22  
GXL  O4  HO4  SING  N  N  23  
GXL  O6  HO6  SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GXL  SMILES            ACDLabs               10.04  "OC1C(O)C(OC(O)C1O)CO"  
GXL  SMILES_CANONICAL  CACTVS                3.341  "OC[C@@H]1O[C@@H](O)[C@@H](O)[C@H](O)[C@@H]1O"  
GXL  SMILES            CACTVS                3.341  "OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O"  
GXL  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O)O"  
GXL  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C(O1)O)O)O)O)O"  
GXL  InChI             InChI                 1.03   "InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6+/m0/s1"  
GXL  InChIKey          InChI                 1.03   WQZGKKKJIJFFOK-SXUWKVJYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GXL  "SYSTEMATIC NAME"                      ACDLabs               10.04  alpha-L-galactopyranose  
GXL  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.5.0  "(2R,3S,4R,5S,6S)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol"  
GXL  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    LGalpa  
GXL  "COMMON NAME"                          GMML                  1.0    a-L-galactopyranose  
GXL  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-L-Galp  
GXL  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    Gal  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
GXL  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
GXL  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
GXL  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
GXL  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GXL  "Create component"          2005-04-18  EBI   
GXL  "Modify descriptor"         2011-06-04  RCSB  
GXL  "Other modification"        2019-08-12  RCSB  
GXL  "Modify leaving atom flag"  2019-09-17  PDBE  
GXL  "Other modification"        2019-12-19  RCSB  
GXL  "Other modification"        2020-07-03  RCSB  
GXL  "Modify name"               2020-07-17  RCSB  
GXL  "Modify synonyms"           2020-07-17  RCSB  
GXL  "Modify atom id"            2020-07-17  RCSB  
GXL  "Modify component atom id"  2020-07-17  RCSB  
##
