data_A1ACL
# 
_chem_comp.id                                    A1ACL 
_chem_comp.name                                  "5-[(5,6-dichloropyrimidin-4-yl)amino]-1,3-dihydro-2H-indol-2-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H8 Cl2 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-12 
_chem_comp.pdbx_modified_date                    2024-12-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        295.124 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ACL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GV7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ACL C1  C1  C  0 1 Y N N N N N 27.243 -10.243 13.329 -2.699 -0.349 0.011  C1  A1ACL 1  
A1ACL N1  N1  N  0 1 N N N N N N 22.334 -9.546  19.269 4.977  0.848  0.338  N1  A1ACL 2  
A1ACL C2  C2  C  0 1 Y N N N N N 26.168 -10.029 14.203 -1.374 0.089  -0.034 C2  A1ACL 3  
A1ACL N2  N2  N  0 1 Y N N N N N 25.002 -9.488  13.789 -1.128 1.375  -0.266 N2  A1ACL 4  
A1ACL C3  C3  C  0 1 Y N N N N N 25.460 -10.041 16.584 0.987  -0.335 0.234  C3  A1ACL 5  
A1ACL N3  N3  N  0 1 Y N N N N N 25.876 -9.299  11.574 -3.378 1.847  -0.415 N3  A1ACL 6  
A1ACL C4  C4  C  0 1 Y N N N N N 24.873 -8.771  16.647 1.260  0.890  0.829  C4  A1ACL 7  
A1ACL C5  C5  C  0 1 Y N N N N N 23.815 -8.517  17.510 2.556  1.354  0.903  C5  A1ACL 8  
A1ACL C6  C6  C  0 1 Y N N N N N 23.360 -9.551  18.321 3.603  0.597  0.382  C6  A1ACL 9  
A1ACL C7  C7  C  0 1 N N N N N N 22.160 -10.773 19.829 5.657  -0.146 -0.258 C7  A1ACL 10 
A1ACL C8  C8  C  0 1 N N N N N N 23.163 -11.712 19.195 4.646  -1.198 -0.663 C8  A1ACL 11 
A1ACL C9  C9  C  0 1 Y N N N N N 23.926 -10.820 18.263 3.321  -0.628 -0.211 C9  A1ACL 12 
A1ACL C10 C10 C  0 1 Y N N N N N 24.989 -11.066 17.402 2.029  -1.094 -0.287 C10 A1ACL 13 
A1ACL C11 C11 C  0 1 Y N N N N N 24.932 -9.170  12.499 -2.117 2.227  -0.451 C11 A1ACL 14 
A1ACL O   O1  O  0 1 N N N N N N 21.330 -11.053 20.684 6.855  -0.192 -0.438 O   A1ACL 15 
A1ACL N   N4  N  0 1 N N N N N N 26.250 -10.440 15.493 -0.330 -0.803 0.161  N   A1ACL 16 
A1ACL CL1 CL1 CL 0 0 N N N N N N 28.728 -10.983 13.803 -3.076 -2.017 0.311  CL1 A1ACL 17 
A1ACL C   C12 C  0 1 Y N N N N N 27.012 -9.815  11.999 -3.704 0.582  -0.184 C   A1ACL 18 
A1ACL CL  CL2 CL 0 0 N N N N N N 28.272 -9.856  10.841 -5.371 0.098  -0.140 CL  A1ACL 19 
A1ACL H1  H1  H  0 1 N N N N N N 21.794 -8.739  19.507 5.392  1.650  0.693  H1  A1ACL 20 
A1ACL H2  H2  H  0 1 N N N N N N 25.248 -7.979  16.016 0.453  1.482  1.234  H2  A1ACL 21 
A1ACL H3  H3  H  0 1 N N N N N N 23.357 -7.540  17.550 2.761  2.308  1.366  H3  A1ACL 22 
A1ACL H4  H4  H  0 1 N N N N N N 22.656 -12.517 18.643 4.648  -1.332 -1.744 H4  A1ACL 23 
A1ACL H5  H5  H  0 1 N N N N N N 23.828 -12.150 19.954 4.856  -2.142 -0.161 H5  A1ACL 24 
A1ACL H6  H6  H  0 1 N N N N N N 25.446 -12.044 17.367 1.824  -2.048 -0.750 H6  A1ACL 25 
A1ACL H7  H7  H  0 1 N N N N N N 23.993 -8.756  12.163 -1.887 3.264  -0.642 H7  A1ACL 26 
A1ACL H8  H8  H  0 1 N N N N N N 26.963 -11.112 15.693 -0.513 -1.752 0.247  H8  A1ACL 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ACL CL  C   SING N N 1  
A1ACL N3  C   DOUB Y N 2  
A1ACL N3  C11 SING Y N 3  
A1ACL C   C1  SING Y N 4  
A1ACL C11 N2  DOUB Y N 5  
A1ACL C1  CL1 SING N N 6  
A1ACL C1  C2  DOUB Y N 7  
A1ACL N2  C2  SING Y N 8  
A1ACL C2  N   SING N N 9  
A1ACL N   C3  SING N N 10 
A1ACL C3  C4  DOUB Y N 11 
A1ACL C3  C10 SING Y N 12 
A1ACL C4  C5  SING Y N 13 
A1ACL C10 C9  DOUB Y N 14 
A1ACL C5  C6  DOUB Y N 15 
A1ACL C9  C6  SING Y N 16 
A1ACL C9  C8  SING N N 17 
A1ACL C6  N1  SING N N 18 
A1ACL C8  C7  SING N N 19 
A1ACL N1  C7  SING N N 20 
A1ACL C7  O   DOUB N N 21 
A1ACL N1  H1  SING N N 22 
A1ACL C4  H2  SING N N 23 
A1ACL C5  H3  SING N N 24 
A1ACL C8  H4  SING N N 25 
A1ACL C8  H5  SING N N 26 
A1ACL C10 H6  SING N N 27 
A1ACL C11 H7  SING N N 28 
A1ACL N   H8  SING N N 29 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ACL SMILES           ACDLabs              12.01 "Clc1c(Cl)ncnc1Nc1cc2CC(=O)Nc2cc1"                                                                               
A1ACL InChI            InChI                1.06  "InChI=1S/C12H8Cl2N4O/c13-10-11(14)15-5-16-12(10)17-7-1-2-8-6(3-7)4-9(19)18-8/h1-3,5H,4H2,(H,18,19)(H,15,16,17)" 
A1ACL InChIKey         InChI                1.06  BBFLDVQVTYHLEG-UHFFFAOYSA-N                                                                                      
A1ACL SMILES_CANONICAL CACTVS               3.385 "Clc1ncnc(Nc2ccc3NC(=O)Cc3c2)c1Cl"                                                                               
A1ACL SMILES           CACTVS               3.385 "Clc1ncnc(Nc2ccc3NC(=O)Cc3c2)c1Cl"                                                                               
A1ACL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Nc3c(c(ncn3)Cl)Cl)CC(=O)N2"                                                                           
A1ACL SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Nc3c(c(ncn3)Cl)Cl)CC(=O)N2"                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1ACL "SYSTEMATIC NAME" ACDLabs              12.01 "5-[(5,6-dichloropyrimidin-4-yl)amino]-1,3-dihydro-2H-indol-2-one"   
A1ACL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[[5,6-bis(chloranyl)pyrimidin-4-yl]amino]-1,3-dihydroindol-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ACL "Create component" 2024-01-12 RCSB 
A1ACL "Initial release"  2024-12-11 RCSB 
# 
