data_8ZL
# 
_chem_comp.id                                    8ZL 
_chem_comp.name                                  "(5S,8R)-N,N-dimethyl-8-[[(2S)-1-[4-(methylamino)-4-oxidanylidene-butanoyl]pyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(12),13,15-triene-5-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H35 N5 O7 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-11-10 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        561.650 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8ZL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q6Q 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8ZL N1  N1  N 0 1 N N N -2.267 1.455  -23.859 3.685  1.892  0.336  N1  8ZL 1  
8ZL C7  C1  C 0 1 N N N -1.337 -0.451 -24.857 2.496  3.840  1.162  C7  8ZL 2  
8ZL C8  C2  C 0 1 N N S -2.153 0.802  -25.173 2.529  2.297  1.150  C8  8ZL 3  
8ZL N2  N2  N 0 1 N N N -3.368 1.050  -27.247 0.071  2.027  1.115  N2  8ZL 4  
8ZL C9  C3  C 0 1 N N N -3.388 0.510  -26.019 1.260  1.762  0.539  C9  8ZL 5  
8ZL O1  O1  O 0 1 N N N -4.368 2.291  -24.013 3.442  -0.301 0.568  O1  8ZL 6  
8ZL C1  C4  C 0 1 N N N -3.669 5.646  -23.300 6.717  -1.429 -1.716 C1  8ZL 7  
8ZL O5  O2  O 0 1 N N N -6.744 1.577  -28.480 -2.148 -0.107 1.946  O5  8ZL 8  
8ZL C5  C5  C 0 1 N N N -1.058 1.188  -23.054 4.355  3.103  -0.170 C5  8ZL 9  
8ZL C6  C6  C 0 1 N N N -0.332 0.068  -23.838 3.961  4.221  0.828  C6  8ZL 10 
8ZL N3  N3  N 0 1 N N N -5.746 2.133  -26.534 -0.762 -0.930 0.388  N3  8ZL 11 
8ZL C4  C7  C 0 1 N N N -3.257 2.344  -23.512 4.071  0.623  0.098  C4  8ZL 12 
8ZL O4  O3  O 0 1 N N N -2.984 2.906  -31.615 -2.688 0.139  -0.372 O4  8ZL 13 
8ZL C3  C8  C 0 1 N N N -3.017 3.326  -22.384 5.285  0.352  -0.753 C3  8ZL 14 
8ZL O3  O4  O 0 1 N N N -3.987 2.853  -29.600 -3.447 2.189  -0.007 O3  8ZL 15 
8ZL C2  C9  C 0 1 N N N -2.543 4.687  -22.937 5.503  -1.158 -0.865 C2  8ZL 16 
8ZL N4  N4  N 0 1 N N N -7.349 1.422  -24.173 -0.649 -1.765 3.334  N4  8ZL 17 
8ZL O6  O5  O 0 1 N N N -7.502 3.634  -23.877 -2.667 -2.380 2.650  O6  8ZL 18 
8ZL C23 C10 C 0 1 N N N -7.224 2.699  -24.609 -1.511 -2.144 2.370  C23 8ZL 19 
8ZL C25 C11 C 0 1 N N N -7.298 1.207  -22.732 -1.108 -1.639 4.720  C25 8ZL 20 
8ZL C24 C12 C 0 1 N N N -7.404 0.172  -24.924 0.748  -1.480 2.997  C24 8ZL 21 
8ZL C21 C13 C 0 1 N N S -6.828 2.986  -26.069 -1.038 -2.275 0.945  C21 8ZL 22 
8ZL C20 C14 C 0 1 N N N -6.401 4.454  -26.180 -2.128 -2.939 0.102  C20 8ZL 23 
8ZL S   S1  S 0 1 N N N -6.185 5.087  -27.863 -3.522 -1.796 -0.098 S   8ZL 24 
8ZL C19 C15 C 0 1 N N N -4.389 4.977  -28.115 -3.628 -1.594 -1.898 C19 8ZL 25 
8ZL C18 C16 C 0 1 Y N N -3.931 5.667  -29.376 -4.647 -0.533 -2.226 C18 8ZL 26 
8ZL C17 C17 C 0 1 Y N N -3.968 7.065  -29.394 -5.640 -0.790 -3.148 C17 8ZL 27 
8ZL C16 C18 C 0 1 Y N N -3.701 7.770  -30.559 -6.577 0.183  -3.449 C16 8ZL 28 
8ZL C15 C19 C 0 1 Y N N -3.357 7.094  -31.717 -6.526 1.417  -2.826 C15 8ZL 29 
8ZL C14 C20 C 0 1 Y N N -3.276 5.706  -31.722 -5.537 1.689  -1.904 C14 8ZL 30 
8ZL C13 C21 C 0 1 Y N N -3.565 4.975  -30.561 -4.585 0.713  -1.599 C13 8ZL 31 
8ZL C12 C22 C 0 1 N N N -3.471 3.481  -30.667 -3.514 0.994  -0.622 C12 8ZL 32 
8ZL C11 C23 C 0 1 N N N -4.004 1.405  -29.595 -2.340 2.397  0.929  C11 8ZL 33 
8ZL C22 C24 C 0 1 N N N -5.756 1.569  -27.748 -1.402 0.103  1.013  C22 8ZL 34 
8ZL C10 C25 C 0 1 N N R -4.447 0.928  -28.218 -1.163 1.507  0.521  C10 8ZL 35 
8ZL O2  O6  O 0 1 N N N -4.326 -0.149 -25.570 1.308  1.093  -0.472 O2  8ZL 36 
8ZL O   O7  O 0 1 N N N -3.497 6.510  -24.156 7.346  -0.505 -2.187 O   8ZL 37 
8ZL N   N5  N 0 1 N N N -4.808 5.547  -22.617 7.103  -2.698 -1.955 N   8ZL 38 
8ZL C   C26 C 0 1 N N N -5.930 6.453  -22.820 8.284  -2.961 -2.782 C   8ZL 39 
8ZL H1  H1  H 0 1 N N N -1.970 -1.241 -24.426 1.816  4.218  0.399  H1  8ZL 40 
8ZL H2  H2  H 0 1 N N N -0.832 -0.835 -25.755 2.215  4.214  2.146  H2  8ZL 41 
8ZL H3  H3  H 0 1 N N N -1.504 1.441  -25.790 2.641  1.920  2.166  H3  8ZL 42 
8ZL H4  H4  H 0 1 N N N -2.558 1.572  -27.514 0.032  2.562  1.923  H4  8ZL 43 
8ZL H5  H5  H 0 1 N N N -0.429 2.087  -22.982 5.436  2.964  -0.177 H5  8ZL 44 
8ZL H6  H6  H 0 1 N N N -1.328 0.847  -22.043 3.997  3.344  -1.172 H6  8ZL 45 
8ZL H7  H7  H 0 1 N N N -0.027 -0.740 -23.156 4.012  5.201  0.355  H7  8ZL 46 
8ZL H8  H8  H 0 1 N N N 0.555  0.472  -24.348 4.587  4.186  1.720  H8  8ZL 47 
8ZL H9  H9  H 0 1 N N N -4.970 1.962  -25.927 -0.166 -0.793 -0.364 H9  8ZL 48 
8ZL H10 H10 H 0 1 N N N -3.953 3.470  -21.825 5.133  0.772  -1.747 H10 8ZL 49 
8ZL H11 H11 H 0 1 N N N -2.247 2.922  -21.711 6.161  0.812  -0.294 H11 8ZL 50 
8ZL H12 H12 H 0 1 N N N -1.945 4.501  -23.841 4.628  -1.618 -1.324 H12 8ZL 51 
8ZL H13 H13 H 0 1 N N N -1.914 5.168  -22.174 5.655  -1.578 0.129  H13 8ZL 52 
8ZL H14 H14 H 0 1 N N N -7.258 2.178  -22.217 -0.980 -2.591 5.234  H14 8ZL 53 
8ZL H15 H15 H 0 1 N N N -8.196 0.659  -22.411 -0.524 -0.871 5.227  H15 8ZL 54 
8ZL H16 H16 H 0 1 N N N -6.402 0.621  -22.480 -2.162 -1.359 4.729  H16 8ZL 55 
8ZL H17 H17 H 0 1 N N N -7.510 -0.671 -24.226 1.337  -2.394 3.084  H17 8ZL 56 
8ZL H18 H18 H 0 1 N N N -8.266 0.193  -25.607 0.806  -1.107 1.975  H18 8ZL 57 
8ZL H19 H19 H 0 1 N N N -6.478 0.053  -25.505 1.141  -0.729 3.682  H19 8ZL 58 
8ZL H20 H20 H 0 1 N N N -7.713 2.833  -26.704 -0.130 -2.877 0.915  H20 8ZL 59 
8ZL H21 H21 H 0 1 N N N -5.443 4.568  -25.651 -1.724 -3.194 -0.878 H21 8ZL 60 
8ZL H22 H22 H 0 1 N N N -7.168 5.067  -25.685 -2.471 -3.846 0.600  H22 8ZL 61 
8ZL H23 H23 H 0 1 N N N -4.107 3.915  -28.173 -2.655 -1.296 -2.288 H23 8ZL 62 
8ZL H24 H24 H 0 1 N N N -3.885 5.444  -27.256 -3.928 -2.538 -2.352 H24 8ZL 63 
8ZL H25 H25 H 0 1 N N N -4.208 7.603  -28.489 -5.687 -1.752 -3.637 H25 8ZL 64 
8ZL H26 H26 H 0 1 N N N -3.762 8.848  -30.562 -7.352 -0.023 -4.173 H26 8ZL 65 
8ZL H27 H27 H 0 1 N N N -3.151 7.648  -32.621 -7.263 2.170  -3.063 H27 8ZL 66 
8ZL H28 H28 H 0 1 N N N -2.989 5.188  -32.625 -5.498 2.653  -1.419 H28 8ZL 67 
8ZL H29 H29 H 0 1 N N N -4.708 1.040  -30.358 -2.033 3.442  0.902  H29 8ZL 68 
8ZL H30 H30 H 0 1 N N N -2.996 1.022  -29.813 -2.663 2.138  1.937  H30 8ZL 69 
8ZL H31 H31 H 0 1 N N N -4.658 -0.146 -28.323 -1.071 1.503  -0.565 H31 8ZL 70 
8ZL H32 H32 H 0 1 N N N -4.897 4.820  -21.936 6.600  -3.437 -1.579 H32 8ZL 71 
8ZL H33 H33 H 0 1 N N N -6.753 6.175  -22.146 8.439  -4.037 -2.862 H33 8ZL 72 
8ZL H34 H34 H 0 1 N N N -5.612 7.484  -22.604 8.131  -2.541 -3.776 H34 8ZL 73 
8ZL H35 H35 H 0 1 N N N -6.272 6.385  -23.863 9.159  -2.501 -2.323 H35 8ZL 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8ZL C14 C15 DOUB Y N 1  
8ZL C14 C13 SING Y N 2  
8ZL C15 C16 SING Y N 3  
8ZL O4  C12 DOUB N N 4  
8ZL C12 C13 SING N N 5  
8ZL C12 O3  SING N N 6  
8ZL C13 C18 DOUB Y N 7  
8ZL C16 C17 DOUB Y N 8  
8ZL O3  C11 SING N N 9  
8ZL C11 C10 SING N N 10 
8ZL C17 C18 SING Y N 11 
8ZL C18 C19 SING N N 12 
8ZL O5  C22 DOUB N N 13 
8ZL C10 C22 SING N N 14 
8ZL C10 N2  SING N N 15 
8ZL C19 S   SING N N 16 
8ZL S   C20 SING N N 17 
8ZL C22 N3  SING N N 18 
8ZL N2  C9  SING N N 19 
8ZL N3  C21 SING N N 20 
8ZL C20 C21 SING N N 21 
8ZL C21 C23 SING N N 22 
8ZL C9  O2  DOUB N N 23 
8ZL C9  C8  SING N N 24 
8ZL C8  C7  SING N N 25 
8ZL C8  N1  SING N N 26 
8ZL C24 N4  SING N N 27 
8ZL C7  C6  SING N N 28 
8ZL C23 N4  SING N N 29 
8ZL C23 O6  DOUB N N 30 
8ZL N4  C25 SING N N 31 
8ZL O   C1  DOUB N N 32 
8ZL O1  C4  DOUB N N 33 
8ZL N1  C4  SING N N 34 
8ZL N1  C5  SING N N 35 
8ZL C6  C5  SING N N 36 
8ZL C4  C3  SING N N 37 
8ZL C1  C2  SING N N 38 
8ZL C1  N   SING N N 39 
8ZL C2  C3  SING N N 40 
8ZL C   N   SING N N 41 
8ZL C7  H1  SING N N 42 
8ZL C7  H2  SING N N 43 
8ZL C8  H3  SING N N 44 
8ZL N2  H4  SING N N 45 
8ZL C5  H5  SING N N 46 
8ZL C5  H6  SING N N 47 
8ZL C6  H7  SING N N 48 
8ZL C6  H8  SING N N 49 
8ZL N3  H9  SING N N 50 
8ZL C3  H10 SING N N 51 
8ZL C3  H11 SING N N 52 
8ZL C2  H12 SING N N 53 
8ZL C2  H13 SING N N 54 
8ZL C25 H14 SING N N 55 
8ZL C25 H15 SING N N 56 
8ZL C25 H16 SING N N 57 
8ZL C24 H17 SING N N 58 
8ZL C24 H18 SING N N 59 
8ZL C24 H19 SING N N 60 
8ZL C21 H20 SING N N 61 
8ZL C20 H21 SING N N 62 
8ZL C20 H22 SING N N 63 
8ZL C19 H23 SING N N 64 
8ZL C19 H24 SING N N 65 
8ZL C17 H25 SING N N 66 
8ZL C16 H26 SING N N 67 
8ZL C15 H27 SING N N 68 
8ZL C14 H28 SING N N 69 
8ZL C11 H29 SING N N 70 
8ZL C11 H30 SING N N 71 
8ZL C10 H31 SING N N 72 
8ZL N   H32 SING N N 73 
8ZL C   H33 SING N N 74 
8ZL C   H34 SING N N 75 
8ZL C   H35 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8ZL InChI            InChI                1.06  "InChI=1S/C26H35N5O7S/c1-27-21(32)10-11-22(33)31-12-6-9-20(31)24(35)28-18-13-38-26(37)17-8-5-4-7-16(17)14-39-15-19(29-23(18)34)25(36)30(2)3/h4-5,7-8,18-20H,6,9-15H2,1-3H3,(H,27,32)(H,28,35)(H,29,34)/t18-,19-,20+/m1/s1" 
8ZL InChIKey         InChI                1.06  DXVZHGSXTJTODF-AQNXPRMDSA-N                                                                                                                                                                                                
8ZL SMILES_CANONICAL CACTVS               3.385 "CNC(=O)CCC(=O)N1CCC[C@H]1C(=O)N[C@@H]2COC(=O)c3ccccc3CSC[C@@H](NC2=O)C(=O)N(C)C"                                                                                                                                          
8ZL SMILES           CACTVS               3.385 "CNC(=O)CCC(=O)N1CCC[CH]1C(=O)N[CH]2COC(=O)c3ccccc3CSC[CH](NC2=O)C(=O)N(C)C"                                                                                                                                               
8ZL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC(=O)CCC(=O)N1CCC[C@H]1C(=O)N[C@@H]2COC(=O)c3ccccc3CSC[C@@H](NC2=O)C(=O)N(C)C"                                                                                                                                          
8ZL SMILES           "OpenEye OEToolkits" 2.0.7 "CNC(=O)CCC(=O)N1CCCC1C(=O)NC2COC(=O)c3ccccc3CSCC(NC2=O)C(=O)N(C)C"                                                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           8ZL 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(5~{S},8~{R})-~{N},~{N}-dimethyl-8-[[(2~{S})-1-[4-(methylamino)-4-oxidanylidene-butanoyl]pyrrolidin-2-yl]carbonylamino]-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(12),13,15-triene-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8ZL "Create component"  2021-11-10 PDBE 
8ZL "Initial release"   2022-03-16 RCSB 
8ZL "Modify descriptor" 2022-08-22 RCSB 
# 
