data_4HL
# 
_chem_comp.id                                    4HL 
_chem_comp.name                                  "(6E)-4-[(2S)-2-amino-2-carboxyethyl]-6-[2-(4-hydroxybenzyl)hydraziniumylidene]-3-oxocyclohexa-1,4-dien-1-olate" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C16 H17 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               TYR 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2006-11-30 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        331.323 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4HL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2E2U 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4HL C1    C1    C 0  1 N N N N N N 3.847  -1.131 26.114 2.885  -1.923 -0.303 C1    4HL 1  
4HL NX1   NX1   N 0  1 N N N N N N 2.688  -0.724 26.953 1.485  -1.544 -0.096 NX1   4HL 2  
4HL NX2   NX2   N 1  1 N N N N N N 1.494  -1.336 26.555 0.555  -2.431 -0.201 NX2   4HL 3  
4HL "C4'" "C4'" C 0  1 Y N N N N N 3.094  -0.323 23.793 4.273  -0.406 1.125  "C4'" 4HL 4  
4HL "C5'" "C5'" C 0  1 Y N N N N N 3.306  0.422  22.605 5.084  0.700  1.289  "C5'" 4HL 5  
4HL "C6'" "C6'" C 0  1 Y N N N N N 4.503  1.169  22.442 5.389  1.503  0.200  "C6'" 4HL 6  
4HL "C1'" "C1'" C 0  1 Y N N N N N 5.491  1.177  23.462 4.879  1.194  -1.052 "C1'" 4HL 7  
4HL "C2'" "C2'" C 0  1 Y N N N N N 5.284  0.432  24.654 4.068  0.087  -1.212 "C2'" 4HL 8  
4HL "C3'" "C3'" C 0  1 Y N N N N N 4.081  -0.324 24.828 3.765  -0.712 -0.124 "C3'" 4HL 9  
4HL "OH'" "OH'" O 0  1 N N N N N N 4.698  1.885  21.295 6.187  2.592  0.360  "OH'" 4HL 10 
4HL OX1   OX1   O 0  1 N N N N N N -3.730 0.556  26.942 -4.539 -1.040 0.542  OX1   4HL 11 
4HL N     N     N 0  1 N N N Y Y N -0.971 3.471  25.761 -1.883 1.854  -1.326 N     4HL 12 
4HL CA    CA    C 0  1 N N S Y N N -1.738 3.556  27.008 -3.066 1.767  -0.460 CA    4HL 13 
4HL C     C     C 0  1 N N N Y N Y -1.464 4.796  27.843 -3.539 3.155  -0.115 C     4HL 14 
4HL O     O     O 0  1 N N N Y N Y -0.373 5.362  27.811 -2.785 4.094  -0.222 O     4HL 15 
4HL CB    CB    C 0  1 N N N N N N -1.495 2.329  27.943 -2.705 1.017  0.823  CB    4HL 16 
4HL CG    CG    C 0  1 N N N N N N -1.335 0.937  27.322 -2.350 -0.409 0.489  CG    4HL 17 
4HL CD1   CD1   C 0  1 N N N N N N -2.570 0.139  26.852 -3.374 -1.373 0.371  CD1   4HL 18 
4HL CD2   CD2   C 0  1 N N N N N N -0.062 0.377  27.183 -1.055 -0.749 0.301  CD2   4HL 19 
4HL CE1   CE1   C 0  1 N N N N N N -2.275 -1.236 26.251 -3.073 -2.708 0.060  CE1   4HL 20 
4HL CE2   CE2   C 0  1 N N N N N N 0.144  -0.896 26.625 -0.713 -2.088 -0.014 CE2   4HL 21 
4HL CZ    CZ    C 0  1 N N N N N N -0.953 -1.685 26.164 -1.777 -3.089 -0.132 CZ    4HL 22 
4HL OH    OH    O -1 1 N N N N N N -0.758 -2.931 25.614 -1.478 -4.376 -0.432 OH    4HL 23 
4HL OXT   OXT   O 0  1 N Y N Y N Y -2.475 5.188  28.610 -4.796 3.349  0.312  OXT   4HL 24 
4HL H11   H11   H 0  1 N N N N N N 3.698  -2.182 25.826 3.166  -2.686 0.423  H11   4HL 25 
4HL H12   H12   H 0  1 N N N N N N 4.753  -1.045 26.732 3.010  -2.317 -1.311 H12   4HL 26 
4HL H3    H3    H 0  1 N N N N N N 2.876  -0.976 27.902 1.258  -0.626 0.119  H3    4HL 27 
4HL "H4'" "H4'" H 0  1 N N N N N N 2.184  -0.892 23.917 4.038  -1.034 1.971  "H4'" 4HL 28 
4HL "H5'" "H5'" H 0  1 N N N N N N 2.558  0.421  21.826 5.480  0.939  2.265  "H5'" 4HL 29 
4HL "H1'" "H1'" H 0  1 N N N N N N 6.398  1.748  23.332 5.115  1.818  -1.901 "H1'" 4HL 30 
4HL "H2'" "H2'" H 0  1 N N N N N N 6.035  0.436  25.430 3.670  -0.155 -2.186 "H2'" 4HL 31 
4HL H5    H5    H 0  1 N N N N N N 5.538  2.327  21.336 7.129  2.411  0.239  H5    4HL 32 
4HL H     H     H 0  1 N N N Y Y N -1.212 2.629  25.278 -2.111 2.288  -2.208 H     4HL 33 
4HL H2    H2    H 0  1 N Y N Y Y N -1.184 4.259  25.184 -1.132 2.345  -0.864 H2    4HL 34 
4HL HA    HA    H 0  1 N N N Y N N -2.808 3.559  26.753 -3.860 1.232  -0.982 HA    4HL 35 
4HL HB2   HB2   H 0  1 N N N N N N -0.576 2.535  28.512 -1.853 1.501  1.300  HB2   4HL 36 
4HL HB3   HB3   H 0  1 N N N N N N -2.350 2.277  28.634 -3.557 1.029  1.503  HB3   4HL 37 
4HL HD2   HD2   H 0  1 N N N N N N 0.795  0.944  27.517 -0.281 0.000  0.390  HD2   4HL 38 
4HL HE1   HE1   H 0  1 N N N N N N -3.084 -1.857 25.895 -3.868 -3.435 -0.027 HE1   4HL 39 
4HL HXT   HXT   H 0  1 N Y N Y N Y -2.216 5.953  29.110 -5.053 4.258  0.522  HXT   4HL 40 
4HL H4    H4    H 0  1 N N N N N N 1.611  -2.243 26.150 0.782  -3.349 -0.417 H4    4HL 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4HL "OH'" "C6'" SING N N 1  
4HL "C6'" "C5'" DOUB Y N 2  
4HL "C6'" "C1'" SING Y N 3  
4HL "C5'" "C4'" SING Y N 4  
4HL "C1'" "C2'" DOUB Y N 5  
4HL "C4'" "C3'" DOUB Y N 6  
4HL "C2'" "C3'" SING Y N 7  
4HL "C3'" C1    SING N N 8  
4HL OH    CZ    SING N N 9  
4HL N     CA    SING N N 10 
4HL C1    NX1   SING N N 11 
4HL CZ    CE1   DOUB N N 12 
4HL CZ    CE2   SING N N 13 
4HL CE1   CD1   SING N N 14 
4HL NX2   CE2   DOUB N N 15 
4HL NX2   NX1   SING N N 16 
4HL CE2   CD2   SING N N 17 
4HL CD1   OX1   DOUB N N 18 
4HL CD1   CG    SING N N 19 
4HL CA    C     SING N N 20 
4HL CA    CB    SING N N 21 
4HL CD2   CG    DOUB N N 22 
4HL CG    CB    SING N N 23 
4HL O     C     DOUB N N 24 
4HL C     OXT   SING N N 25 
4HL C1    H11   SING N N 26 
4HL C1    H12   SING N N 27 
4HL NX1   H3    SING N N 28 
4HL "C4'" "H4'" SING N N 29 
4HL "C5'" "H5'" SING N N 30 
4HL "C1'" "H1'" SING N N 31 
4HL "C2'" "H2'" SING N N 32 
4HL "OH'" H5    SING N N 33 
4HL N     H     SING N N 34 
4HL N     H2    SING N N 35 
4HL CA    HA    SING N N 36 
4HL CB    HB2   SING N N 37 
4HL CB    HB3   SING N N 38 
4HL CD2   HD2   SING N N 39 
4HL CE1   HE1   SING N N 40 
4HL OXT   HXT   SING N N 41 
4HL NX2   H4    SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4HL SMILES           ACDLabs              12.01 "O=C1C=C([O-])/C(C=C1CC(C(=O)O)N)=[NH+]/NCc2ccc(O)cc2"                                                                                                 
4HL InChI            InChI                1.03  "InChI=1S/C16H17N3O5/c17-12(16(23)24)5-10-6-13(15(22)7-14(10)21)19-18-8-9-1-3-11(20)4-2-9/h1-4,6-7,12,18,20,22H,5,8,17H2,(H,23,24)/b19-13+/t12-/m0/s1" 
4HL InChIKey         InChI                1.03  RJWQUSDGNJBNSR-NHLWYUBBSA-N                                                                                                                            
4HL SMILES_CANONICAL CACTVS               3.370 "N[C@@H](CC1=CC(=[NH+]NCc2ccc(O)cc2)C(=CC1=O)[O-])C(O)=O"                                                                                              
4HL SMILES           CACTVS               3.370 "N[CH](CC1=CC(=[NH+]NCc2ccc(O)cc2)C(=CC1=O)[O-])C(O)=O"                                                                                                
4HL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1CN/[NH+]=C/2\C=C(C(=O)C=C2[O-])C[C@@H](C(=O)O)N)O"                                                                                           
4HL SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1CN[NH+]=C2C=C(C(=O)C=C2[O-])CC(C(=O)O)N)O"                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
4HL "SYSTEMATIC NAME" ACDLabs              12.01 "(6E)-4-[(2S)-2-amino-2-carboxyethyl]-6-[2-(4-hydroxybenzyl)hydraziniumylidene]-3-oxocyclohexa-1,4-dien-1-olate"                                     
4HL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(6E)-4-[(2S)-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]-6-[(4-hydroxyphenyl)methylamino]azaniumylidene-3-oxidanylidene-cyclohexa-1,4-dien-1-olate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4HL "Create component"              2006-11-30 RCSB 
4HL "Modify descriptor"             2011-06-04 RCSB 
4HL "Modify name"                   2013-04-15 PDBJ 
4HL "Modify formula"                2013-04-15 PDBJ 
4HL "Modify linking type"           2013-04-15 PDBJ 
4HL "Modify parent residue"         2013-04-15 PDBJ 
4HL "Modify model coordinates code" 2013-04-15 PDBJ 
4HL "Modify backbone"               2023-11-03 PDBE 
4HL "Modify PCM"                    2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            4HL 
_pdbx_chem_comp_pcm.modified_residue_id                TYR 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
