data_Z9K
#

_chem_comp.id                                   Z9K
_chem_comp.name                                 "3-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid"
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H12 O10 S"
_chem_comp.mon_nstd_parent_comp_id              Z0F
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       288.229
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Z9K
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1E03
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Z9K  O4   O4   O  0  1  N  N  N  66.200  -2.057  -14.811   0.863   0.805   1.691  O4   Z9K   1  
Z9K  C4   C4   C  0  1  N  N  S  67.233  -1.080  -14.563   1.436  -0.293   0.978  C4   Z9K   2  
Z9K  C5   C5   C  0  1  N  N  R  66.909   0.179  -15.416   2.035   0.208  -0.338  C5   Z9K   3  
Z9K  O5   O5   O  0  1  N  N  N  67.145  -0.139  -16.792   0.998   0.758  -1.154  O5   Z9K   4  
Z9K  C6   C6   C  0  1  N  N  N  65.437   0.615  -15.303   3.065   1.270  -0.050  C6   Z9K   5  
Z9K  O10  O10  O  0  1  N  N  N  65.195   1.740  -14.783   2.882   2.405  -0.421  O10  Z9K   6  
Z9K  O6   O6   O  0  1  N  N  N  64.653   0.229  -16.221   4.185   0.954   0.619  O6   Z9K   7  
Z9K  C3   C3   C  0  1  N  N  S  68.593  -1.674  -15.016   0.348  -1.328   0.674  C3   Z9K   8  
Z9K  O3   O3   O  0  1  N  N  N  69.362  -2.095  -13.910   0.932  -2.456   0.019  O3   Z9K   9  
Z9K  C7   C7   C  0  1  N  N  N  69.493  -3.509  -13.851   1.381  -3.478   0.911  C7   Z9K  10  
Z9K  C2   C2   C  0  1  N  N  R  69.390  -0.640  -15.857  -0.705  -0.693  -0.240  C2   Z9K  11  
Z9K  O2   O2   O  0  1  N  N  N  70.623  -1.241  -16.279  -1.334   0.394   0.440  O2   Z9K  12  
Z9K  S1   S1   S  0  1  N  N  N  72.010  -0.401  -16.193  -2.810   0.560   0.110  S1   Z9K  13  
Z9K  O7   O7   O  0  1  N  N  N  71.780   0.846  -16.859  -3.562  -0.543   0.841  O7   Z9K  14  
Z9K  O8   O8   O  0  1  N  N  N  72.279  -0.249  -14.798  -3.219   1.786   0.702  O8   Z9K  15  
Z9K  O9   O9   O  0  1  N  N  N  72.968  -1.231  -16.866  -2.944   0.285  -1.278  O9   Z9K  16  
Z9K  C1   C1   C  0  1  N  N  R  68.530  -0.248  -17.098  -0.022  -0.177  -1.510  C1   Z9K  17  
Z9K  O1   O1   O  0  1  N  Y  N  68.982   0.986  -17.638   0.561  -1.273  -2.216  O1   Z9K  18  
Z9K  HO1  HO1  H  0  1  N  Y  N  69.907   0.922  -17.845   1.013  -1.019  -3.033  HO1  Z9K  19  
Z9K  H4   H4   H  0  1  N  N  N  67.281  -0.807  -13.498   2.217  -0.752   1.583  H4   Z9K  20  
Z9K  H5   H5   H  0  1  N  N  N  67.557   1.007  -15.092   2.507  -0.624  -0.862  H5   Z9K  21  
Z9K  HO6  HO6  H  0  1  N  N  N  63.985   0.888  -16.365   4.816   1.669   0.780  HO6  Z9K  22  
Z9K  H3   H3   H  0  1  N  N  N  68.380  -2.537  -15.664  -0.120  -1.649   1.604  H3   Z9K  23  
Z9K  H51  H51  H  0  1  N  N  N  70.098  -3.785  -12.975   2.137  -3.069   1.582  H51  Z9K  24  
Z9K  H52  H52  H  0  1  N  N  N  68.496  -3.966  -13.767   0.538  -3.846   1.496  H52  Z9K  25  
Z9K  H53  H53  H  0  1  N  N  N  69.986  -3.870  -14.766   1.811  -4.299   0.337  H53  Z9K  26  
Z9K  H2   H2   H  0  1  N  N  N  69.577   0.257  -15.248  -1.454  -1.439  -0.506  H2   Z9K  27  
Z9K  H7O  H7O  H  0  1  N  N  N  71.851   1.557  -16.233  -4.518  -0.529   0.698  H7O  Z9K  28  
Z9K  H1   H1   H  0  1  N  N  N  68.667  -1.038  -17.851  -0.760   0.314  -2.145  H1   Z9K  29  
Z9K  HO4  HO4  H  0  1  N  N  N  66.374  -2.839  -14.300   1.495   1.503   1.912  HO4  Z9K  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Z9K  O4   C4   SING  N  N   1  
Z9K  C4   C5   SING  N  N   2  
Z9K  C4   C3   SING  N  N   3  
Z9K  C4   H4   SING  N  N   4  
Z9K  C5   O5   SING  N  N   5  
Z9K  C5   C6   SING  N  N   6  
Z9K  C5   H5   SING  N  N   7  
Z9K  O5   C1   SING  N  N   8  
Z9K  C6   O10  DOUB  N  N   9  
Z9K  C6   O6   SING  N  N  10  
Z9K  O6   HO6  SING  N  N  11  
Z9K  C3   O3   SING  N  N  12  
Z9K  C3   C2   SING  N  N  13  
Z9K  C3   H3   SING  N  N  14  
Z9K  O3   C7   SING  N  N  15  
Z9K  C7   H51  SING  N  N  16  
Z9K  C7   H52  SING  N  N  17  
Z9K  C7   H53  SING  N  N  18  
Z9K  C2   O2   SING  N  N  19  
Z9K  C2   C1   SING  N  N  20  
Z9K  C2   H2   SING  N  N  21  
Z9K  O2   S1   SING  N  N  22  
Z9K  S1   O7   SING  N  N  23  
Z9K  S1   O8   DOUB  N  N  24  
Z9K  S1   O9   DOUB  N  N  25  
Z9K  O7   H7O  SING  N  N  26  
Z9K  C1   O1   SING  N  N  27  
Z9K  C1   H1   SING  N  N  28  
Z9K  HO1  O1   SING  N  N  29  
Z9K  O4   HO4  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z9K  SMILES            ACDLabs               12.01  "O=C(O)C1OC(O)C(OS(=O)(=O)O)C(OC)C1O"  
Z9K  InChI             InChI                 1.03   "InChI=1S/C7H12O10S/c1-15-3-2(8)4(6(9)10)16-7(11)5(3)17-18(12,13)14/h2-5,7-8,11H,1H3,(H,9,10)(H,12,13,14)/t2-,3-,4+,5+,7+/m0/s1"  
Z9K  InChIKey          InChI                 1.03   ANYCAUYSISUNKI-QVVHOTIMSA-N  
Z9K  SMILES_CANONICAL  CACTVS                3.370  "CO[C@H]1[C@H](O)[C@@H](O[C@@H](O)[C@@H]1O[S](O)(=O)=O)C(O)=O"  
Z9K  SMILES            CACTVS                3.370  "CO[CH]1[CH](O)[CH](O[CH](O)[CH]1O[S](O)(=O)=O)C(O)=O"  
Z9K  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CO[C@H]1[C@@H]([C@@H](O[C@H]([C@@H]1OS(=O)(=O)O)O)C(=O)O)O"  
Z9K  SMILES            "OpenEye OEToolkits"  1.7.6  "COC1C(C(OC(C1OS(=O)(=O)O)O)C(=O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Z9K  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid"  
Z9K  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R,3S,4S,5R,6R)-4-methoxy-3,6-bis(oxidanyl)-5-sulfooxy-oxane-2-carboxylic acid"  
#
_pdbx_chem_comp_related.comp_id            Z9K
_pdbx_chem_comp_related.related_comp_id    Z0F
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  Z9K  C1   Z0F  C1   "Carbohydrate core"  
 2  Z9K  C2   Z0F  C2   "Carbohydrate core"  
 3  Z9K  C3   Z0F  C3   "Carbohydrate core"  
 4  Z9K  C4   Z0F  C4   "Carbohydrate core"  
 5  Z9K  C5   Z0F  C5   "Carbohydrate core"  
 6  Z9K  C6   Z0F  C6   "Carbohydrate core"  
 7  Z9K  O1   Z0F  O1   "Carbohydrate core"  
 8  Z9K  O2   Z0F  O2   "Carbohydrate core"  
 9  Z9K  O3   Z0F  O3   "Carbohydrate core"  
10  Z9K  O4   Z0F  O4   "Carbohydrate core"  
11  Z9K  O5   Z0F  O5   "Carbohydrate core"  
12  Z9K  O6   Z0F  O6   "Carbohydrate core"  
13  Z9K  H1   Z0F  H1   "Carbohydrate core"  
14  Z9K  H2   Z0F  H2   "Carbohydrate core"  
15  Z9K  H3   Z0F  H3   "Carbohydrate core"  
16  Z9K  H4   Z0F  H4   "Carbohydrate core"  
17  Z9K  H5   Z0F  H5   "Carbohydrate core"  
18  Z9K  HO1  Z0F  HO1  "Carbohydrate core"  
19  Z9K  HO4  Z0F  HO4  "Carbohydrate core"  
20  Z9K  HO6  Z0F  HO6  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
Z9K  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
Z9K  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
Z9K  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
Z9K  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Z9K  "Create component"          2012-12-18  RCSB  
Z9K  "Modify atom id"            2020-05-09  RCSB  
Z9K  "Modify component atom id"  2020-07-17  RCSB  
Z9K  "Initial release"           2020-07-29  RCSB  
##
