data_Z4K
#

_chem_comp.id                                   Z4K
_chem_comp.name                                 2-O-sulfo-alpha-D-glucopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O9 S"
_chem_comp.mon_nstd_parent_comp_id              GLC
_chem_comp.pdbx_synonyms                        "2-O-sulfo-alpha-D-glucose; 2-O-sulfo-D-glucose; 2-O-sulfo-glucose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-17
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       260.219
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Z4K
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3T8X
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  Z4K  2-O-sulfo-alpha-D-glucose  PDB  ?  
2  Z4K  2-O-sulfo-D-glucose        PDB  ?  
3  Z4K  2-O-sulfo-glucose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Z4K  O1   O1   O  0  1  N  Y  N  28.375  -54.597  33.096   0.502   1.383   1.654  O1   Z4K   1  
Z4K  O2   O2   O  0  1  N  N  N  26.627  -54.917  31.173  -1.634  -0.146   0.676  O2   Z4K   2  
Z4K  O3   O3   O  0  1  N  N  N  26.084  -52.272  29.816  -0.114  -2.512   0.151  O3   Z4K   3  
Z4K  O4   O4   O  0  1  N  N  N  27.364  -50.033  31.247   2.726  -2.192   0.267  O4   Z4K   4  
Z4K  O5   O5   O  0  1  N  N  N  27.232  -52.649  34.028   1.587   1.225  -0.406  O5   Z4K   5  
Z4K  O6   O6   O  0  1  N  N  N  26.666  -50.228  34.834   4.441   1.558  -0.350  O6   Z4K   6  
Z4K  C1   C1   C  0  1  N  N  S  27.096  -53.887  33.314   0.315   1.218   0.247  C1   Z4K   7  
Z4K  C2   C2   C  0  1  N  N  R  26.383  -53.706  31.933  -0.388  -0.114  -0.023  C2   Z4K   8  
Z4K  C3   C3   C  0  1  N  N  S  26.823  -52.450  31.097   0.502  -1.261   0.465  C3   Z4K   9  
Z4K  C4   C4   C  0  1  N  N  S  26.878  -51.184  32.005   1.862  -1.170  -0.234  C4   Z4K  10  
Z4K  C5   C5   C  0  1  N  N  R  27.771  -51.528  33.239   2.479   0.203   0.044  C5   Z4K  11  
Z4K  C6   C6   C  0  1  N  N  N  27.939  -50.386  34.208   3.810   0.325  -0.701  C6   Z4K  12  
Z4K  S1   S1   S  0  1  N  N  N  25.687  -55.973  31.532  -2.827   0.285  -0.164  S1   Z4K  13  
Z4K  O7   O7   O  0  1  N  N  N  26.295  -56.771  32.628  -3.147  -0.861  -1.114  O7   Z4K  14  
Z4K  O8   O8   O  0  1  N  N  N  25.454  -56.854  30.320  -3.930   0.387   0.726  O8   Z4K  15  
Z4K  O9   O9   O  0  1  N  N  N  24.381  -55.312  31.967  -2.379   1.364  -0.974  O9   Z4K  16  
Z4K  HO1  H1O  H  0  1  N  Y  N  28.213  -55.403  32.621   0.944   2.207   1.898  HO1  Z4K  17  
Z4K  HO3  H3O  H  0  1  N  Y  N  26.404  -51.497  29.370   0.397  -3.283   0.433  HO3  Z4K  18  
Z4K  HO4  H4O  H  0  1  N  Y  N  27.392  -49.270  31.812   3.607  -2.193  -0.132  HO4  Z4K  19  
Z4K  HO6  H6O  H  0  1  N  Y  N  26.708  -49.516  35.462   5.292   1.702  -0.786  HO6  Z4K  20  
Z4K  H1   H11  H  0  1  N  N  N  26.452  -54.550  33.910  -0.294   2.036  -0.137  H1   Z4K  21  
Z4K  H2   H21  H  0  1  N  N  N  25.304  -53.614  32.125  -0.568  -0.221  -1.093  H2   Z4K  22  
Z4K  H3   H31  H  0  1  N  N  N  27.868  -52.647  30.816   0.639  -1.183   1.544  H3   Z4K  23  
Z4K  H4   H41  H  0  1  N  N  N  25.860  -50.979  32.367   1.729  -1.300  -1.308  H4   Z4K  24  
Z4K  H5   H51  H  0  1  N  N  N  28.765  -51.809  32.862   2.649   0.316   1.114  H5   Z4K  25  
Z4K  H61  H61  H  0  1  N  N  N  28.708  -50.627  34.956   3.629   0.302  -1.775  H61  Z4K  26  
Z4K  H62  H62  H  0  1  N  N  N  28.222  -49.467  33.674   4.458  -0.507  -0.424  H62  Z4K  27  
Z4K  H7O  H7O  H  0  1  N  N  N  26.411  -57.669  32.340  -3.897  -0.688  -1.700  H7O  Z4K  28  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Z4K  O1   C1   SING  N  N   1  
Z4K  O2   S1   SING  N  N   2  
Z4K  O2   C2   SING  N  N   3  
Z4K  O3   C3   SING  N  N   4  
Z4K  O4   C4   SING  N  N   5  
Z4K  C1   O5   SING  N  N   6  
Z4K  C2   C1   SING  N  N   7  
Z4K  C3   C2   SING  N  N   8  
Z4K  C3   C4   SING  N  N   9  
Z4K  C4   C5   SING  N  N  10  
Z4K  C5   O5   SING  N  N  11  
Z4K  C5   C6   SING  N  N  12  
Z4K  C6   O6   SING  N  N  13  
Z4K  S1   O9   DOUB  N  N  14  
Z4K  S1   O7   SING  N  N  15  
Z4K  O8   S1   DOUB  N  N  16  
Z4K  O3   HO3  SING  N  N  17  
Z4K  O4   HO4  SING  N  N  18  
Z4K  O6   HO6  SING  N  N  19  
Z4K  C1   H1   SING  N  N  20  
Z4K  C2   H2   SING  N  N  21  
Z4K  C3   H3   SING  N  N  22  
Z4K  C4   H4   SING  N  N  23  
Z4K  C5   H5   SING  N  N  24  
Z4K  C6   H61  SING  N  N  25  
Z4K  C6   H62  SING  N  N  26  
Z4K  O7   H7O  SING  N  N  27  
Z4K  HO1  O1   SING  N  N  28  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z4K  SMILES            ACDLabs               12.01  "O=S(=O)(OC1C(O)C(O)C(OC1O)CO)O"  
Z4K  InChI             InChI                 1.03   "InChI=1S/C6H12O9S/c7-1-2-3(8)4(9)5(6(10)14-2)15-16(11,12)13/h2-10H,1H2,(H,11,12,13)/t2-,3-,4+,5-,6+/m1/s1"  
Z4K  InChIKey          InChI                 1.03   MOGKHCGKIJXABF-DVKNGEFBSA-N  
Z4K  SMILES_CANONICAL  CACTVS                3.370  "OC[C@H]1O[C@H](O)[C@H](O[S](O)(=O)=O)[C@@H](O)[C@@H]1O"  
Z4K  SMILES            CACTVS                3.370  "OC[CH]1O[CH](O)[CH](O[S](O)(=O)=O)[CH](O)[CH]1O"  
Z4K  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)OS(=O)(=O)O)O)O)O"  
Z4K  SMILES            "OpenEye OEToolkits"  1.7.6  "C(C1C(C(C(C(O1)O)OS(=O)(=O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Z4K  "SYSTEMATIC NAME"  ACDLabs               12.01  2-O-sulfo-alpha-D-glucopyranose  
Z4K  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl] hydrogen sulfate"  
#
_pdbx_chem_comp_related.comp_id            Z4K
_pdbx_chem_comp_related.related_comp_id    GLC
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  Z4K  C1   GLC  C1   "Carbohydrate core"  
 2  Z4K  C2   GLC  C2   "Carbohydrate core"  
 3  Z4K  C3   GLC  C3   "Carbohydrate core"  
 4  Z4K  C4   GLC  C4   "Carbohydrate core"  
 5  Z4K  C5   GLC  C5   "Carbohydrate core"  
 6  Z4K  C6   GLC  C6   "Carbohydrate core"  
 7  Z4K  O1   GLC  O1   "Carbohydrate core"  
 8  Z4K  O2   GLC  O2   "Carbohydrate core"  
 9  Z4K  O3   GLC  O3   "Carbohydrate core"  
10  Z4K  O4   GLC  O4   "Carbohydrate core"  
11  Z4K  O5   GLC  O5   "Carbohydrate core"  
12  Z4K  O6   GLC  O6   "Carbohydrate core"  
13  Z4K  H1   GLC  H1   "Carbohydrate core"  
14  Z4K  HO1  GLC  HO1  "Carbohydrate core"  
15  Z4K  H2   GLC  H2   "Carbohydrate core"  
16  Z4K  H3   GLC  H3   "Carbohydrate core"  
17  Z4K  HO3  GLC  HO3  "Carbohydrate core"  
18  Z4K  H4   GLC  H4   "Carbohydrate core"  
19  Z4K  HO4  GLC  HO4  "Carbohydrate core"  
20  Z4K  H5   GLC  H5   "Carbohydrate core"  
21  Z4K  H61  GLC  H61  "Carbohydrate core"  
22  Z4K  H62  GLC  H62  "Carbohydrate core"  
23  Z4K  HO6  GLC  HO6  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
Z4K  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
Z4K  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
Z4K  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
Z4K  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Z4K  "Create component"          2012-12-17  RCSB  
Z4K  "Initial release"           2016-11-02  RCSB  
Z4K  "Other modification"        2020-07-03  RCSB  
Z4K  "Modify parent residue"     2020-07-17  RCSB  
Z4K  "Modify synonyms"           2020-07-17  RCSB  
Z4K  "Modify linking type"       2020-07-17  RCSB  
Z4K  "Modify atom id"            2020-07-17  RCSB  
Z4K  "Modify component atom id"  2020-07-17  RCSB  
Z4K  "Modify leaving atom flag"  2020-07-17  RCSB  
##
