data_YZK
# 
_chem_comp.id                                    YZK 
_chem_comp.name                                  "(3M)-3-(2-methyl-1H-imidazol-1-yl)pyridine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H9 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-22 
_chem_comp.pdbx_modified_date                    2023-07-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        159.188 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YZK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G8K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YZK C10 C1 C 0 1 Y N N 24.452 -45.667 14.353 3.262  -0.071 0.039  C10 YZK 1  
YZK C01 C2 C 0 1 N N N 20.516 -48.621 12.506 -1.382 -2.083 -0.659 C01 YZK 2  
YZK C02 C3 C 0 1 Y N N 20.224 -47.178 12.076 -1.733 -0.683 -0.226 C02 YZK 3  
YZK N03 N1 N 0 1 Y N N 19.169 -46.819 11.358 -2.941 -0.212 -0.076 N03 YZK 4  
YZK C04 C4 C 0 1 Y N N 19.193 -45.514 11.167 -2.873 1.067  0.324  C04 YZK 5  
YZK C05 C5 C 0 1 Y N N 20.327 -45.048 11.813 -1.574 1.406  0.427  C05 YZK 6  
YZK N06 N2 N 0 1 Y N N 20.932 -46.088 12.368 -0.845 0.299  0.079  N06 YZK 7  
YZK C07 C6 C 0 1 Y N N 22.084 -46.007 13.023 0.553  0.196  0.050  C07 YZK 8  
YZK C08 C7 C 0 1 Y N N 23.252 -46.517 12.475 1.317  1.145  -0.624 C08 YZK 9  
YZK C09 C8 C 0 1 Y N N 24.446 -46.375 13.162 2.695  1.004  -0.620 C09 YZK 10 
YZK N11 N3 N 0 1 Y N N 23.336 -45.160 14.829 2.510  -0.958 0.660  N11 YZK 11 
YZK C12 C9 C 0 1 Y N N 22.180 -45.303 14.206 1.196  -0.858 0.685  C12 YZK 12 
YZK H1  H1 H 0 1 N N N 25.377 -45.531 14.893 4.336  -0.188 0.042  H1  YZK 13 
YZK H2  H2 H 0 1 N N N 19.724 -49.284 12.128 -1.299 -2.725 0.219  H2  YZK 14 
YZK H3  H3 H 0 1 N N N 21.486 -48.937 12.095 -2.163 -2.466 -1.316 H3  YZK 15 
YZK H4  H4 H 0 1 N N N 20.547 -48.677 13.604 -0.431 -2.071 -1.192 H4  YZK 16 
YZK H5  H5 H 0 1 N N N 18.473 -44.926 10.617 -3.714 1.712  0.527  H5  YZK 17 
YZK H6  H6 H 0 1 N N N 20.658 -44.021 11.856 -1.182 2.367  0.727  H6  YZK 18 
YZK H7  H7 H 0 1 N N N 23.230 -47.021 11.520 0.847  1.972  -1.134 H7  YZK 19 
YZK H8  H8 H 0 1 N N N 25.357 -46.809 12.776 3.320  1.726  -1.125 H8  YZK 20 
YZK H9  H9 H 0 1 N N N 21.292 -44.860 14.631 0.613  -1.600 1.211  H9  YZK 21 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YZK C04 N03 SING Y N 1  
YZK C04 C05 DOUB Y N 2  
YZK N03 C02 DOUB Y N 3  
YZK C05 N06 SING Y N 4  
YZK C02 N06 SING Y N 5  
YZK C02 C01 SING N N 6  
YZK N06 C07 SING N N 7  
YZK C08 C07 DOUB Y N 8  
YZK C08 C09 SING Y N 9  
YZK C07 C12 SING Y N 10 
YZK C09 C10 DOUB Y N 11 
YZK C12 N11 DOUB Y N 12 
YZK C10 N11 SING Y N 13 
YZK C10 H1  SING N N 14 
YZK C01 H2  SING N N 15 
YZK C01 H3  SING N N 16 
YZK C01 H4  SING N N 17 
YZK C04 H5  SING N N 18 
YZK C05 H6  SING N N 19 
YZK C08 H7  SING N N 20 
YZK C09 H8  SING N N 21 
YZK C12 H9  SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YZK SMILES           ACDLabs              12.01 Cc1nccn1c1cnccc1                                            
YZK InChI            InChI                1.06  "InChI=1S/C9H9N3/c1-8-11-5-6-12(8)9-3-2-4-10-7-9/h2-7H,1H3" 
YZK InChIKey         InChI                1.06  MNHXJOCWNHZKLQ-UHFFFAOYSA-N                                 
YZK SMILES_CANONICAL CACTVS               3.385 Cc1nccn1c2cccnc2                                            
YZK SMILES           CACTVS               3.385 Cc1nccn1c2cccnc2                                            
YZK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1nccn1c2cccnc2                                            
YZK SMILES           "OpenEye OEToolkits" 2.0.7 Cc1nccn1c2cccnc2                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YZK "SYSTEMATIC NAME" ACDLabs              12.01 "(3M)-3-(2-methyl-1H-imidazol-1-yl)pyridine" 
YZK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-(2-methylimidazol-1-yl)pyridine"          
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YZK "Create component" 2023-06-22 RCSB 
YZK "Initial release"  2023-07-12 RCSB 
# 
