data_Y8K
# 
_chem_comp.id                                    Y8K 
_chem_comp.name                                  "[4-(trifluoromethoxy)phenyl]methyl (3aR,6aS)-3a-methyl-5-(4-sulfamoylbenzoyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H24 F3 N3 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-12 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        527.513 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y8K 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G7E 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y8K C10 C1  C 0 1 Y N N N N N -8.482  11.353 53.280 5.081  -1.564 -0.591 C10 Y8K 1  
Y8K C11 C2  C 0 1 N N N N N N -11.597 12.184 51.276 4.788  2.150  -0.111 C11 Y8K 2  
Y8K O12 O1  O 0 1 N N N N N N -12.396 12.806 51.993 5.554  3.092  -0.061 O12 Y8K 3  
Y8K C15 C3  C 0 1 N N R N N N -13.807 10.786 48.741 1.351  3.386  -0.510 C15 Y8K 4  
Y8K C16 C4  C 0 1 N N N N N N -14.925 9.759  48.695 0.116  4.094  -0.055 C16 Y8K 5  
Y8K C18 C5  C 0 1 N N N N N N -14.967 7.685  47.274 -2.230 3.201  0.297  C18 Y8K 6  
Y8K C20 C6  C 0 1 N N N N N N -14.594 5.730  45.738 -4.456 2.410  0.636  C20 Y8K 7  
Y8K C21 C7  C 0 1 Y N N N N N -13.411 5.176  44.936 -5.220 1.111  0.670  C21 Y8K 8  
Y8K C22 C8  C 0 1 Y N N N N N -12.928 3.871  45.239 -5.358 0.422  1.861  C22 Y8K 9  
Y8K C23 C9  C 0 1 Y N N N N N -11.910 3.305  44.502 -6.057 -0.768 1.894  C23 Y8K 10 
Y8K C24 C10 C 0 1 Y N N N N N -11.358 4.050  43.436 -6.623 -1.272 0.732  C24 Y8K 11 
Y8K C26 C11 C 0 1 N N N N N N -10.640 2.463  41.765 -7.868 -2.901 -0.472 C26 Y8K 12 
Y8K N1  N1  N 0 1 N N N N N N -5.572  12.995 54.106 6.343  -4.161 1.472  N1  Y8K 13 
Y8K S2  S1  S 0 1 N N N N N N -5.804  11.848 52.977 6.917  -3.467 0.082  S2  Y8K 14 
Y8K O3  O2  O 0 1 N N N N N N -4.945  12.153 51.826 8.325  -3.357 0.241  O3  Y8K 15 
Y8K O4  O3  O 0 1 N N N N N N -5.705  10.592 53.629 6.308  -4.164 -0.996 O4  Y8K 16 
Y8K C5  C12 C 0 1 Y N N N N N -7.436  11.984 52.501 6.293  -1.820 0.025  C5  Y8K 17 
Y8K C6  C13 C 0 1 Y N N N N N -7.817  12.675 51.295 7.018  -0.789 0.596  C6  Y8K 18 
Y8K C7  C14 C 0 1 Y N N N N N -9.159  12.729 50.877 6.535  0.503  0.555  C7  Y8K 19 
Y8K C8  C15 C 0 1 Y N N N N N -10.143 12.112 51.647 5.312  0.768  -0.064 C8  Y8K 20 
Y8K C9  C16 C 0 1 Y N N N N N -9.830  11.413 52.855 4.590  -0.276 -0.644 C9  Y8K 21 
Y8K N13 N2  N 0 1 N N N N N N -12.100 11.575 50.164 3.461  2.364  -0.210 N13 Y8K 22 
Y8K C14 C17 C 0 1 N N N N N N -13.582 11.697 49.919 2.782  3.694  -0.211 C14 Y8K 23 
Y8K N17 N3  N 0 1 N N N N N N -14.266 8.751  47.801 -0.918 3.020  0.045  N17 Y8K 24 
Y8K O19 O4  O 0 1 N N N N N N -14.135 6.887  46.442 -3.056 2.140  0.361  O19 Y8K 25 
Y8K O25 O5  O 0 1 N N N N N N -10.353 3.364  42.773 -7.312 -2.443 0.763  O25 Y8K 26 
Y8K F27 F1  F 0 1 N N N N N N -11.193 3.027  40.654 -6.840 -3.094 -1.402 F27 Y8K 27 
Y8K F28 F2  F 0 1 N N N N N N -9.527  1.903  41.368 -8.539 -4.110 -0.261 F28 Y8K 28 
Y8K F29 F3  F 0 1 N N N N N N -11.379 1.474  42.246 -8.767 -1.948 -0.961 F29 Y8K 29 
Y8K C30 C18 C 0 1 Y N N N N N -11.799 5.345  43.111 -6.484 -0.578 -0.461 C30 Y8K 30 
Y8K C31 C19 C 0 1 Y N N N N N -12.834 5.917  43.875 -5.788 0.614  -0.489 C31 Y8K 31 
Y8K O32 O6  O 0 1 N N N N N N -16.162 7.484  47.545 -2.667 4.322  0.467  O32 Y8K 32 
Y8K C33 C20 C 0 1 N N N N N N -12.771 8.901  47.685 -0.236 1.707  -0.184 C33 Y8K 33 
Y8K C34 C21 C 0 1 N N R N N N -12.566 9.795  48.864 1.187  2.002  0.238  C34 Y8K 34 
Y8K C35 C22 C 0 1 N N N N N N -11.392 10.733 49.150 2.404  1.312  -0.338 C35 Y8K 35 
Y8K C37 C23 C 0 1 N N N N N N -13.905 11.727 47.492 1.232  3.115  -2.011 C37 Y8K 36 
Y8K H43 H1  H 0 1 N N N N N N -8.231  10.833 54.192 4.521  -2.373 -1.036 H43 Y8K 37 
Y8K H46 H2  H 0 1 N N N N N N -15.150 9.346  49.690 0.279  4.556  0.918  H46 Y8K 38 
Y8K H47 H3  H 0 1 N N N N N N -15.845 10.168 48.251 -0.184 4.843  -0.788 H47 Y8K 39 
Y8K H48 H4  H 0 1 N N N N N N -14.950 4.973  46.452 -4.863 3.051  -0.146 H48 Y8K 40 
Y8K H49 H5  H 0 1 N N N N N N -15.413 6.006  45.057 -4.547 2.910  1.600  H49 Y8K 41 
Y8K H50 H6  H 0 1 N N N N N N -13.365 3.318  46.057 -4.917 0.815  2.765  H50 Y8K 42 
Y8K H51 H7  H 0 1 N N N N N N -11.543 2.316  44.734 -6.164 -1.306 2.825  H51 Y8K 43 
Y8K H38 H8  H 0 1 N N N N N N -6.150  12.804 54.900 6.963  -4.486 2.144  H38 Y8K 44 
Y8K H39 H9  H 0 1 N N N N N N -4.612  12.998 54.386 5.387  -4.242 1.614  H39 Y8K 45 
Y8K H40 H10 H 0 1 N N N N N N -7.057  13.161 50.701 7.963  -0.996 1.076  H40 Y8K 46 
Y8K H41 H11 H 0 1 N N N N N N -9.425  13.245 49.966 7.101  1.307  1.002  H41 Y8K 47 
Y8K H42 H12 H 0 1 N N N N N N -10.610 10.939 53.433 3.643  -0.077 -1.125 H42 Y8K 48 
Y8K H44 H13 H 0 1 N N N N N N -14.156 11.360 50.795 3.203  4.336  -0.985 H44 Y8K 49 
Y8K H45 H14 H 0 1 N N N N N N -13.858 12.734 49.676 2.872  4.168  0.767  H45 Y8K 50 
Y8K H52 H15 H 0 1 N N N N N N -11.353 5.890  42.292 -6.923 -0.969 -1.367 H52 Y8K 51 
Y8K H53 H16 H 0 1 N N N N N N -13.186 6.914  43.654 -5.683 1.157  -1.416 H53 Y8K 52 
Y8K H54 H17 H 0 1 N N N N N N -12.245 7.941  47.793 -0.673 0.929  0.442  H54 Y8K 53 
Y8K H55 H18 H 0 1 N N N N N N -12.471 9.379  46.741 -0.278 1.428  -1.237 H55 Y8K 54 
Y8K H36 H19 H 0 1 N N N N N N -12.733 9.195  49.771 1.262  2.115  1.320  H36 Y8K 55 
Y8K H57 H20 H 0 1 N N N N N N -11.082 11.307 48.264 2.243  1.050  -1.384 H57 Y8K 56 
Y8K H56 H21 H 0 1 N N N N N N -10.521 10.207 49.569 2.663  0.429  0.248  H56 Y8K 57 
Y8K H60 H22 H 0 1 N N N N N N -14.071 11.122 46.588 1.250  4.060  -2.554 H60 Y8K 58 
Y8K H58 H23 H 0 1 N N N N N N -14.744 12.426 47.624 2.067  2.493  -2.335 H58 Y8K 59 
Y8K H59 H24 H 0 1 N N N N N N -12.969 12.295 47.386 0.294  2.597  -2.214 H59 Y8K 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y8K N1  S2  SING N N 1  
Y8K S2  O3  DOUB N N 2  
Y8K S2  O4  DOUB N N 3  
Y8K S2  C5  SING N N 4  
Y8K C5  C6  DOUB Y N 5  
Y8K C5  C10 SING Y N 6  
Y8K C6  C7  SING Y N 7  
Y8K C7  C8  DOUB Y N 8  
Y8K C8  C9  SING Y N 9  
Y8K C8  C11 SING N N 10 
Y8K C9  C10 DOUB Y N 11 
Y8K C11 O12 DOUB N N 12 
Y8K C11 N13 SING N N 13 
Y8K N13 C14 SING N N 14 
Y8K N13 C35 SING N N 15 
Y8K C14 C15 SING N N 16 
Y8K C15 C16 SING N N 17 
Y8K C15 C34 SING N N 18 
Y8K C15 C37 SING N N 19 
Y8K C16 N17 SING N N 20 
Y8K N17 C18 SING N N 21 
Y8K N17 C33 SING N N 22 
Y8K C18 O19 SING N N 23 
Y8K C18 O32 DOUB N N 24 
Y8K O19 C20 SING N N 25 
Y8K C20 C21 SING N N 26 
Y8K C21 C22 DOUB Y N 27 
Y8K C21 C31 SING Y N 28 
Y8K C22 C23 SING Y N 29 
Y8K C23 C24 DOUB Y N 30 
Y8K C24 O25 SING N N 31 
Y8K C24 C30 SING Y N 32 
Y8K O25 C26 SING N N 33 
Y8K C26 F27 SING N N 34 
Y8K C26 F28 SING N N 35 
Y8K C26 F29 SING N N 36 
Y8K C30 C31 DOUB Y N 37 
Y8K C33 C34 SING N N 38 
Y8K C34 C35 SING N N 39 
Y8K C10 H43 SING N N 40 
Y8K C16 H46 SING N N 41 
Y8K C16 H47 SING N N 42 
Y8K C20 H48 SING N N 43 
Y8K C20 H49 SING N N 44 
Y8K C22 H50 SING N N 45 
Y8K C23 H51 SING N N 46 
Y8K N1  H38 SING N N 47 
Y8K N1  H39 SING N N 48 
Y8K C6  H40 SING N N 49 
Y8K C7  H41 SING N N 50 
Y8K C9  H42 SING N N 51 
Y8K C14 H44 SING N N 52 
Y8K C14 H45 SING N N 53 
Y8K C30 H52 SING N N 54 
Y8K C31 H53 SING N N 55 
Y8K C33 H54 SING N N 56 
Y8K C33 H55 SING N N 57 
Y8K C34 H36 SING N N 58 
Y8K C35 H57 SING N N 59 
Y8K C35 H56 SING N N 60 
Y8K C37 H60 SING N N 61 
Y8K C37 H58 SING N N 62 
Y8K C37 H59 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y8K SMILES           ACDLabs              12.01 "NS(=O)(=O)c1ccc(cc1)C(=O)N1CC2CN(CC2(C)C1)C(=O)OCc1ccc(OC(F)(F)F)cc1"                                                                                                                     
Y8K InChI            InChI                1.06  "InChI=1S/C23H24F3N3O6S/c1-22-13-28(20(30)16-4-8-19(9-5-16)36(27,32)33)10-17(22)11-29(14-22)21(31)34-12-15-2-6-18(7-3-15)35-23(24,25)26/h2-9,17H,10-14H2,1H3,(H2,27,32,33)/t17?,22-/m1/s1" 
Y8K InChIKey         InChI                1.06  BGHGKELMYMNCFY-IVAFLUGOSA-N                                                                                                                                                                
Y8K SMILES_CANONICAL CACTVS               3.385 "C[C@@]12CN(C[C@H]1CN(C2)C(=O)c3ccc(cc3)[S](N)(=O)=O)C(=O)OCc4ccc(OC(F)(F)F)cc4"                                                                                                           
Y8K SMILES           CACTVS               3.385 "C[C]12CN(C[CH]1CN(C2)C(=O)c3ccc(cc3)[S](N)(=O)=O)C(=O)OCc4ccc(OC(F)(F)F)cc4"                                                                                                              
Y8K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]12CN(C[C@@H]1CN(C2)C(=O)OCc3ccc(cc3)OC(F)(F)F)C(=O)c4ccc(cc4)S(=O)(=O)N"                                                                                                             
Y8K SMILES           "OpenEye OEToolkits" 2.0.7 "CC12CN(CC1CN(C2)C(=O)OCc3ccc(cc3)OC(F)(F)F)C(=O)c4ccc(cc4)S(=O)(=O)N"                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y8K "SYSTEMATIC NAME" ACDLabs              12.01 "[4-(trifluoromethoxy)phenyl]methyl (3aR,6aS)-3a-methyl-5-(4-sulfamoylbenzoyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate"                                          
Y8K "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[4-(trifluoromethyloxy)phenyl]methyl (3~{a}~{R},6~{a}~{R})-3~{a}-methyl-2-(4-sulfamoylphenyl)carbonyl-3,4,6,6~{a}-tetrahydro-1~{H}-pyrrolo[3,4-c]pyrrole-5-carboxylate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y8K "Create component" 2023-06-12 RCSB 
Y8K "Initial release"  2024-12-18 RCSB 
# 
