data_V0K
#

_chem_comp.id                                   V0K
_chem_comp.name                                 "1-[[3,4-bis(fluoranyl)phenyl]methyl]-~{N}-[(1~{R})-2-[[(3~{E})-3-(1~{H}-imidazol-5-ylmethylidene)-2-oxidanylidene-1~{H}-indol-5-yl]amino]-2-oxidanylidene-1-phenyl-ethyl]-6-methyl-2-oxidanylidene-pyridine-3-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C34 H26 F2 N6 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-04-01
_chem_comp.pdbx_modified_date                   2021-10-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       620.605
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V0K
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7O2V
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V0K  C01   C1   C  0  1  N  N  N  -15.509  -26.151   2.686   7.651  -0.913  -0.023  C01   V0K   1  
V0K  C02   C2   C  0  1  N  N  N  -14.134  -26.215   3.382   6.212  -1.306   0.197  C02   V0K   2  
V0K  C03   C3   C  0  1  N  N  N  -13.159  -27.190   3.108   5.921  -2.310   1.062  C03   V0K   3  
V0K  C04   C4   C  0  1  N  N  N  -11.872  -27.215   3.790   4.595  -2.686   1.278  C04   V0K   4  
V0K  C05   C5   C  0  1  N  N  N  -11.545  -26.297   4.762   3.584  -2.016   0.593  C05   V0K   5  
V0K  C06   C6   C  0  1  N  N  N  -10.159  -26.257   5.482   2.174  -2.383   0.793  C06   V0K   6  
V0K  C09   C7   C  0  1  N  N  R   -7.955  -27.285   6.600  -0.187  -2.155   0.234  C09   V0K   7  
V0K  C10   C8   C  0  1  N  N  N   -6.854  -28.503   6.319  -1.018  -1.091  -0.436  C10   V0K   8  
V0K  C13   C9   C  0  1  Y  N  N   -4.959  -30.145   7.254  -3.122  -0.048  -0.822  C13   V0K   9  
V0K  C14   C10  C  0  1  Y  N  N   -4.211  -30.638   8.360  -2.660   0.680  -1.913  C14   V0K  10  
V0K  C15   C11  C  0  1  Y  N  N   -3.251  -31.681   8.214  -3.402   1.724  -2.426  C15   V0K  11  
V0K  C16   C12  C  0  1  Y  N  N   -3.005  -32.281   6.946  -4.624   2.060  -1.854  C16   V0K  12  
V0K  C18   C13  C  0  1  N  N  N   -2.202  -33.603   5.164  -6.608   3.010  -1.339  C18   V0K  13  
V0K  C20   C14  C  0  1  N  N  N   -3.254  -32.670   4.571  -6.397   1.914  -0.384  C20   V0K  14  
V0K  C21   C15  C  0  1  N  N  N   -3.480  -32.789   3.204  -7.233   1.522   0.642  C21   V0K  15  
V0K  C22   C16  C  0  1  Y  N  N   -4.404  -32.141   2.221  -6.711   0.822   1.750  C22   V0K  16  
V0K  C23   C17  C  0  1  Y  N  N   -4.735  -30.830   1.807  -7.426   0.118   2.704  C23   V0K  17  
V0K  C25   C18  C  0  1  Y  N  N   -5.988  -32.132   0.527  -5.335  -0.049   3.223  C25   V0K  18  
V0K  C27   C19  C  0  1  Y  N  N   -3.730  -31.842   5.776  -5.090   1.326  -0.755  C27   V0K  19  
V0K  C28   C20  C  0  1  Y  N  N   -4.676  -30.795   5.995  -4.341   0.271  -0.244  C28   V0K  20  
V0K  C29   C21  C  0  1  Y  N  N   -7.372  -25.953   6.047  -0.587  -3.510  -0.291  C29   V0K  21  
V0K  C30   C22  C  0  1  Y  N  N   -7.172  -24.747   6.779  -1.437  -4.314   0.445  C30   V0K  22  
V0K  C31   C23  C  0  1  Y  N  N   -6.673  -23.578   6.145  -1.803  -5.557  -0.036  C31   V0K  23  
V0K  C32   C24  C  0  1  Y  N  N   -6.388  -23.579   4.764  -1.320  -5.996  -1.255  C32   V0K  24  
V0K  C33   C25  C  0  1  Y  N  N   -6.604  -24.751   4.021  -0.470  -5.192  -1.991  C33   V0K  25  
V0K  C34   C26  C  0  1  Y  N  N   -7.097  -25.909   4.657  -0.108  -3.947  -1.512  C34   V0K  26  
V0K  C35   C27  C  0  1  N  N  N  -12.558  -25.210   5.065   3.939  -0.972  -0.301  C35   V0K  27  
V0K  C38   C28  C  0  1  N  N  N  -14.923  -24.130   4.643   5.592   0.436  -1.389  C38   V0K  28  
V0K  C39   C29  C  0  1  Y  N  N  -14.886  -23.008   3.545   5.635   1.741  -0.637  C39   V0K  29  
V0K  C40   C30  C  0  1  Y  N  N  -13.788  -22.112   3.411   6.848   2.257  -0.219  C40   V0K  30  
V0K  C41   C31  C  0  1  Y  N  N  -13.754  -21.113   2.416   6.891   3.454   0.471  C41   V0K  31  
V0K  C42   C32  C  0  1  Y  N  N  -14.837  -20.994   1.524   5.718   4.138   0.744  C42   V0K  32  
V0K  C44   C33  C  0  1  Y  N  N  -15.939  -21.880   1.637   4.502   3.620   0.325  C44   V0K  33  
V0K  C46   C34  C  0  1  Y  N  N  -15.957  -22.871   2.639   4.464   2.424  -0.370  C46   V0K  34  
V0K  F43   F1   F  0  1  N  N  N  -14.832  -20.054   0.573   5.758   5.305   1.424  F43   V0K  35  
V0K  F45   F2   F  0  1  N  N  N  -16.966  -21.768   0.790   3.357   4.285   0.591  F45   V0K  36  
V0K  N08   N1   N  0  1  N  N  N   -9.361  -27.402   5.953   1.231  -1.920  -0.051  N08   V0K  37  
V0K  N12   N2   N  0  1  N  N  N   -5.994  -29.045   7.360  -2.359  -1.106  -0.311  N12   V0K  38  
V0K  N17   N3   N  0  1  N  N  N   -2.099  -33.332   6.564  -5.552   3.048  -2.169  N17   V0K  39  
V0K  N24   N4   N  0  1  Y  N  N   -5.698  -30.830   0.783  -6.550  -0.389   3.570  N24   V0K  40  
V0K  N26   N5   N  0  1  Y  N  N   -5.226  -32.941   1.368  -5.379   0.694   2.102  N26   V0K  41  
V0K  N37   N6   N  0  1  N  N  N  -13.868  -25.217   4.359   5.234  -0.646  -0.468  N37   V0K  42  
V0K  O07   O1   O  0  1  N  N  N   -9.713  -25.121   5.592   1.859  -3.104   1.721  O07   V0K  43  
V0K  O11   O2   O  0  1  N  N  N   -6.787  -28.934   5.179  -0.479  -0.222  -1.087  O11   V0K  44  
V0K  O19   O3   O  0  1  N  N  N   -1.532  -34.458   4.589  -7.574   3.752  -1.375  O19   V0K  45  
V0K  O36   O4   O  0  1  N  N  N  -12.410  -24.303   5.891   3.073  -0.370  -0.912  O36   V0K  46  
V0K  H012  H1   H  0  0  N  N  N  -16.080  -25.297   3.080   7.903  -0.079   0.632  H012  V0K  47  
V0K  H013  H2   H  0  0  N  N  N  -15.366  -26.028   1.602   8.297  -1.761   0.203  H013  V0K  48  
V0K  H011  H3   H  0  0  N  N  N  -16.061  -27.082   2.879   7.791  -0.615  -1.062  H011  V0K  49  
V0K  H031  H4   H  0  0  N  N  N  -13.371  -27.946   2.367   6.717  -2.820   1.584  H031  V0K  50  
V0K  H041  H5   H  0  0  N  N  N  -11.153  -27.976   3.525   4.356  -3.485   1.964  H041  V0K  51  
V0K  H091  H6   H  0  0  N  N  N   -8.074  -27.193   7.690  -0.352  -2.120   1.311  H091  V0K  52  
V0K  H141  H7   H  0  0  N  N  N   -4.376  -30.209   9.338  -1.712   0.425  -2.363  H141  V0K  53  
V0K  H151  H8   H  0  0  N  N  N   -2.701  -32.022   9.079  -3.032   2.282  -3.273  H151  V0K  54  
V0K  H211  H9   H  0  0  N  N  N   -2.836  -33.523   2.742  -8.288   1.750   0.595  H211  V0K  55  
V0K  H231  H10  H  0  0  N  N  N   -4.300  -29.935   2.227  -8.499   0.001   2.739  H231  V0K  56  
V0K  H251  H11  H  0  0  N  N  N   -6.695  -32.484  -0.210  -4.435  -0.327   3.752  H251  V0K  57  
V0K  H281  H12  H  0  0  N  N  N   -5.235  -30.456   5.135  -4.708  -0.297   0.598  H281  V0K  58  
V0K  H301  H13  H  0  0  N  N  N   -7.404  -24.721   7.834  -1.814  -3.971   1.397  H301  V0K  59  
V0K  H311  H14  H  0  0  N  N  N   -6.511  -22.682   6.725  -2.467  -6.185   0.539  H311  V0K  60  
V0K  H321  H15  H  0  0  N  N  N   -6.008  -22.689   4.284  -1.605  -6.967  -1.631  H321  V0K  61  
V0K  H331  H16  H  0  0  N  N  N   -6.392  -24.765   2.962  -0.096  -5.533  -2.945  H331  V0K  62  
V0K  H341  H17  H  0  0  N  N  N   -7.271  -26.794   4.064   0.556  -3.319  -2.088  H341  V0K  63  
V0K  H381  H18  H  0  0  N  N  N  -14.719  -23.679   5.625   4.848   0.499  -2.182  H381  V0K  64  
V0K  H382  H19  H  0  0  N  N  N  -15.921  -24.592   4.652   6.571   0.235  -1.823  H382  V0K  65  
V0K  H401  H20  H  0  0  N  N  N  -12.955  -22.200   4.093   7.763   1.725  -0.431  H401  V0K  66  
V0K  H411  H21  H  0  0  N  N  N  -12.907  -20.447   2.339   7.838   3.856   0.798  H411  V0K  67  
V0K  H461  H22  H  0  0  N  N  N  -16.805  -23.536   2.714   3.517   2.020  -0.698  H461  V0K  68  
V0K  H081  H23  H  0  0  N  N  N   -9.752  -28.317   5.849   1.490  -1.431  -0.848  H081  V0K  69  
V0K  H121  H24  H  0  0  N  N  N   -6.101  -28.636   8.266  -2.797  -1.849   0.133  H121  V0K  70  
V0K  H171  H25  H  0  0  N  N  N   -1.482  -33.807   7.191  -5.448   3.684  -2.894  H171  V0K  71  
V0K  H261  H27  H  0  0  N  N  N   -5.251  -33.941   1.374  -4.620   1.075   1.632  H261  V0K  72  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V0K  C25  N24   DOUB  Y  N   1  
V0K  C25  N26   SING  Y  N   2  
V0K  F43  C42   SING  N  N   3  
V0K  N24  C23   SING  Y  N   4  
V0K  F45  C44   SING  N  N   5  
V0K  N26  C22   SING  Y  N   6  
V0K  C42  C44   DOUB  Y  N   7  
V0K  C42  C41   SING  Y  N   8  
V0K  C44  C46   SING  Y  N   9  
V0K  C23  C22   DOUB  Y  N  10  
V0K  C22  C21   SING  N  N  11  
V0K  C41  C40   DOUB  Y  N  12  
V0K  C46  C39   DOUB  Y  N  13  
V0K  C01  C02   SING  N  N  14  
V0K  C03  C02   DOUB  N  N  15  
V0K  C03  C04   SING  N  N  16  
V0K  C21  C20   DOUB  N  E  17  
V0K  C02  N37   SING  N  N  18  
V0K  C40  C39   SING  Y  N  19  
V0K  C39  C38   SING  N  N  20  
V0K  C04  C05   DOUB  N  N  21  
V0K  C33  C34   DOUB  Y  N  22  
V0K  C33  C32   SING  Y  N  23  
V0K  N37  C38   SING  N  N  24  
V0K  N37  C35   SING  N  N  25  
V0K  C20  C18   SING  N  N  26  
V0K  C20  C27   SING  N  N  27  
V0K  O19  C18   DOUB  N  N  28  
V0K  C34  C29   SING  Y  N  29  
V0K  C05  C35   SING  N  N  30  
V0K  C05  C06   SING  N  N  31  
V0K  C32  C31   DOUB  Y  N  32  
V0K  C35  O36   DOUB  N  N  33  
V0K  C18  N17   SING  N  N  34  
V0K  O11  C10   DOUB  N  N  35  
V0K  C06  O07   DOUB  N  N  36  
V0K  C06  N08   SING  N  N  37  
V0K  C27  C28   DOUB  Y  N  38  
V0K  C27  C16   SING  Y  N  39  
V0K  N08  C09   SING  N  N  40  
V0K  C28  C13   SING  Y  N  41  
V0K  C29  C09   SING  N  N  42  
V0K  C29  C30   DOUB  Y  N  43  
V0K  C31  C30   SING  Y  N  44  
V0K  C10  C09   SING  N  N  45  
V0K  C10  N12   SING  N  N  46  
V0K  N17  C16   SING  N  N  47  
V0K  C16  C15   DOUB  Y  N  48  
V0K  C13  N12   SING  N  N  49  
V0K  C13  C14   DOUB  Y  N  50  
V0K  C15  C14   SING  Y  N  51  
V0K  C01  H012  SING  N  N  52  
V0K  C01  H013  SING  N  N  53  
V0K  C01  H011  SING  N  N  54  
V0K  C03  H031  SING  N  N  55  
V0K  C04  H041  SING  N  N  56  
V0K  C09  H091  SING  N  N  57  
V0K  C14  H141  SING  N  N  58  
V0K  C15  H151  SING  N  N  59  
V0K  C21  H211  SING  N  N  60  
V0K  C23  H231  SING  N  N  61  
V0K  C25  H251  SING  N  N  62  
V0K  C28  H281  SING  N  N  63  
V0K  C30  H301  SING  N  N  64  
V0K  C31  H311  SING  N  N  65  
V0K  C32  H321  SING  N  N  66  
V0K  C33  H331  SING  N  N  67  
V0K  C34  H341  SING  N  N  68  
V0K  C38  H381  SING  N  N  69  
V0K  C38  H382  SING  N  N  70  
V0K  C40  H401  SING  N  N  71  
V0K  C41  H411  SING  N  N  72  
V0K  C46  H461  SING  N  N  73  
V0K  N08  H081  SING  N  N  74  
V0K  N12  H121  SING  N  N  75  
V0K  N17  H171  SING  N  N  76  
V0K  N26  H261  SING  N  N  77  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V0K  InChI             InChI                 1.03   "InChI=1S/C34H26F2N6O4/c1-19-7-10-24(34(46)42(19)17-20-8-11-27(35)28(36)13-20)31(43)41-30(21-5-3-2-4-6-21)33(45)39-22-9-12-29-25(14-22)26(32(44)40-29)15-23-16-37-18-38-23/h2-16,18,30H,17H2,1H3,(H,37,38)(H,39,45)(H,40,44)(H,41,43)/b26-15+/t30-/m1/s1"  
V0K  InChIKey          InChI                 1.03   KHPDVVDNRUBARQ-WOZRVJTFSA-N  
V0K  SMILES_CANONICAL  CACTVS                3.385  "CC1=CC=C(C(=O)N[C@@H](C(=O)Nc2ccc3NC(=O)/C(=C/c4[nH]cnc4)c3c2)c5ccccc5)C(=O)N1Cc6ccc(F)c(F)c6"  
V0K  SMILES            CACTVS                3.385  "CC1=CC=C(C(=O)N[CH](C(=O)Nc2ccc3NC(=O)C(=Cc4[nH]cnc4)c3c2)c5ccccc5)C(=O)N1Cc6ccc(F)c(F)c6"  
V0K  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1=CC=C(C(=O)N1Cc2ccc(c(c2)F)F)C(=O)N[C@H](c3ccccc3)C(=O)Nc4ccc5c(c4)/C(=C\c6cnc[nH]6)/C(=O)N5"  
V0K  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1=CC=C(C(=O)N1Cc2ccc(c(c2)F)F)C(=O)NC(c3ccccc3)C(=O)Nc4ccc5c(c4)C(=Cc6cnc[nH]6)C(=O)N5"  
#
_pdbx_chem_comp_identifier.comp_id          V0K
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "1-[[3,4-bis(fluoranyl)phenyl]methyl]-~{N}-[(1~{R})-2-[[(3~{E})-3-(1~{H}-imidazol-5-ylmethylidene)-2-oxidanylidene-1~{H}-indol-5-yl]amino]-2-oxidanylidene-1-phenyl-ethyl]-6-methyl-2-oxidanylidene-pyridine-3-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V0K  "Create component"  2021-04-01  PDBE  
V0K  "Initial release"   2021-10-20  RCSB  
##
